Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0355 atgtTTAGATTAATGATTGAACCAAATGAGATGACTGAAGATAGATTTGGAAtcaaaatttatgttttaaaatacaCTTTTTCAAGTAATAATGATACAAGTCAACGACGATCTTATATCCGATGGTTTTCGGATGTTACAACGGTGCCTTGTCAACTATTACCCTCTCTCTTTCCTCCATACCTCCACCAACTTCTTTCCCAACACCTTCCTAGTGACAATATCCAAACCTTGTCTTCATATGTTATATCCTATGCTCATTCCATACTCAATGATCCTAATACTAATCCTTTACAAGTTTTTGATAATGATCAGTATCGTTTGTTACCTTTTACTTTGGTCATTGCTGTGCCTACTACTATAATTACTACTGTATTTGAAGGAGGTGATGGTGAAGATTTGGACAGGATCATCACTAATAGAGTCATGGGAGAGTCCATGCAAGACGGAAAAATGATTCCCGCATCGGAGGAAGCTATAGCTTCACTTAAGAAAGTTGAAGTATTGGGTAACAAATTAGTTGAGACTTGTCATCGGTGCAATGTCTGTCTAAAGGATTTTGAAGATGATGACGATGTTTCAAGAATGCCGTGTGATCATGTGTTTCATACATATTGTATTGTAAGGCTAAGAAGCATACCTCAATCTCGGCCAAAACGAGAATCGCGATGCAGAGCTGCTCGTCCCACATGTTCCGTCGTccacggcgttttccggcgagatgGTAACGGTGCAGCGCTTTCTGGTTCGAAATGCAGTGTTCTCGTCTGGCGTTGA 777 0.3732 MFRLMIEPNEMTEDRFGIKIYVLKYTFSSNNDTSQRRSYIRWFSDVTTVPCQLLPSLFPPYLHQLLSQHLPSDNIQTLSSYVISYAHSILNDPNTNPLQVFDNDQYRLLPFTLVIAVPTTIITTVFEGGDGEDLDRIITNRVMGESMQDGKMIPASEEAIASLKKVEVLGNKLVETCHRCNVCLKDFEDDDDVSRMPCDHVFHTYCIVRLRSIPQSRPKRESRCRAARPTCSVVHGVFRRDGNGAALSGSKCSVLVWR 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0355 258 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 90 209 - -
Sto9g0355 258 ProSiteProfiles Zinc finger RING-type profile. 180 228 IPR001841 -
Sto9g0355 258 Pfam RING-like zinc finger 180 207 IPR001841 -
Sto9g0355 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 240 IPR013083 -
Sto9g0355 258 PANTHER F6A14.12 PROTEIN-RELATED 90 209 - -
Sto9g0355 258 SUPERFAMILY RING/U-box 179 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0355 Sto-Chr9 3377752 3382219 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0355 113 243 C3H Transcription Factor Family AT1G26800 29.771 6.15e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0355 - K11982 qlo:115951765 62.7734