Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0346 ATGGATGATACCAAGGATGATGCAAGGTATCCCCCTAATATGTATGATGTTGATCACCACCAAGCTCACTCAGCCCCAACAAAACCATCTTTTGGTGGCAGAAATTCCCTTACTGACTGGACTGAACATGAGACACTTGTTCTTCTTGATGCGTGGGGTGATCGGTTTCTTCAACAAGGAAGGAAGAGTCTTAGATCCGAGCAATGGCAAGAAGTtgcagaaaatgtatcagaaatttcaaaaattgaaaGGACAGATACTCAATGTAGGAATCGTCTGGACACATTAAAGAAAAAGTACAAAAAGGAGAAGACTAAATTAGCAGAAATTGGTGGTGGATCAAGCAAATGGGTCTATTTTAAAAGGATGGATAAACTATTGTCTTCCCCTCCACAGCAAGCAGGTCTCTCTTGTGGTTTGGACTCAGGAGAGTATGTTTTCATGAATCCTAAAGCCTATTTGAACCATGCTAATGGGTTAGATGAAATGAGGGATAGTCCAGGAAATTCAGAGTCTActggtgaagaagaagaagatttagaTGGACTTCAtccaaagaaaagaagaaatagagGAGACAGTGATGAAACCTCTTCCTTCAGATTGCTTGCTGATTCTATTCAGAAGTTTGGAGAGATATATGAGAAGATACAATATAGTAAAAGGCAGCAAATGGCGGAACTGGAAAAGATGAGGATGGATTTCCAGAAGGAATTGGAAACACAGAAGAGGCAGATTTTAGAGAGAGTACAGAGTGAGATTGCAAAGCTACATCAGAGAGATGAGGAAGAGAATGATGACTCTATTGAGAATGGTCTGTAA 822 0.3698 MDDTKDDARYPPNMYDVDHHQAHSAPTKPSFGGRNSLTDWTEHETLVLLDAWGDRFLQQGRKSLRSEQWQEVAENVSEISKIERTDTQCRNRLDTLKKKYKKEKTKLAEIGGGSSKWVYFKRMDKLLSSPPQQAGLSCGLDSGEYVFMNPKAYLNHANGLDEMRDSPGNSESTGEEEEDLDGLHPKKRRNRGDSDETSSFRLLADSIQKFGEIYEKIQYSKRQQMAELEKMRMDFQKELETQKRQILERVQSEIAKLHQRDEEENDDSIENGL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0346 273 PANTHER OS01G0718900 PROTEIN 18 271 - -
Sto9g0346 273 MobiDBLite consensus disorder prediction 1 36 - -
Sto9g0346 273 Gene3D - 40 102 - -
Sto9g0346 273 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 18 271 IPR044823 -
Sto9g0346 273 MobiDBLite consensus disorder prediction 179 197 - -
Sto9g0346 273 Coils Coil 247 267 - -
Sto9g0346 273 MobiDBLite consensus disorder prediction 1 16 - -
Sto9g0346 273 ProSiteProfiles Myb-like domain profile. 40 97 IPR001005 -
Sto9g0346 273 Coils Coil 225 245 - -
Sto9g0346 273 MobiDBLite consensus disorder prediction 158 197 - -
Sto9g0346 273 Pfam Myb/SANT-like DNA-binding domain 39 126 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0346 Sto-Chr9 3284321 3285538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0346 40 263 Trihelix Transcription Factor Family AT1G54060 34.717 6.40e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto9g0346 Myb_DNA-bind_4 4.1e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0346 - - qlo:115991991 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0346 9 3284321 3285538 Sto9g0346 9 3284321 3285538 ECH