Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0333 ATGACCAAGCTCATAATGATCCTCCCTCTCCTATTCTTCCTCCCCATCATCTCTTTCTCCTCCACCTCTCAAGACGTCGCCGTTTACTGGGGCCAAAACGGCAACGAGGGAAGCCTAAACGACACCTGCGCCACAGGAAAATACACCATCGTAATCATAGCCTTCCTCTACGCCTTCGGCAACAACCAAACCCCACAGCTCAACCTCGCAGGCCACTGTGACCCTTCGCCTTCTTCCTCGTCGTCATCTCCATGCACCGACGTCTCGTcgcacgtgagatattgccaaAGCCGAGGCATCAAAGTGATCCTCTCCATCGGAGGCGGATTCGACACGTACAATCTCTCTTCCCCCGAAGACGCCCGGAATCTCTCCGATTACTTGTGGAACAATTTCTTATACTACACAGACGACTCTTCGTCGTCATCGTCGTCACGCCCACTTGGAGATTCCACTCTGGATGGGATAGATTTTGATGTGGAGGAATCCACGCCATTTTTGGAGGATCTAGCACGTGCCCTTAAGTCACATAGTGGTGAGACGAAGAGAGTGTACCTAAGTGCAGCACCACAATGTCCGTTTCCTGACCCTCCgctagggagtgtcctaaaCACGGGGCTTTTTGACTATGTTTGGATTCAATTCTATAACCATCCTCCATGTGAGTACACGCAAGGGAATGAGGAAAACTTCATGAGGAATTGGAACCAATGGACGACGTCGTTGAAGACGACGAAAATATTCATGGGTTTGCCTGCGTCTCAGGATGCCACACCCACAGGGTATGTTCCGGCGGATTTGTTAGTTTCCAAGGTAGTTCCTATGGTGAAGAAGTCAGAGAACTACGGTGGGATAATGTTGTGGTCGAGGTACTATGATAGAGTGAGTGGGTATAGTAGTGTGATTCAGAATGGGAGTGTGTGTGAAGTGGAAATTAGGAGCACTAGTGGttgtggtgatgatgatgatgagagtaGTAATGGGTTTGTGGAAGGTTTTGGTTATATGACAAGAGAGAGTTATAAAGTGTACGAGAGTGGGAATCTTGGTGTGTTGTGTTGTGAGATGATATGTCGGAGGAATTGTTCTTGTGTGGGTTATGCCATTGTCAACGAGGTTGATGATTCTGGGTGTCAGATATGGGGCAGAGGAAGCACGTTCCTTCAAGATTCTGGTGCTAATGGCAAACCTATTTATGTACTTCAACACAACTACAAAGGAAACACATCTTTACCACATTCTGGGTTAAAAGGAAATGGAAGTGCGTATATACCATCATTTGGGGTAAATGGACGGcaaaattttattgttaaacACAAAGTAATCTGGCTTATCATTTTGATTGGAGCAATCCTCACCATTCCTCTTATCTGCTACTTTTGCTTTGCCTTCCGGAGAAAACATAAAGCAAAAGTGGATAGAAAAATGAAGCAAATGAAGATATTACATGAAATTGGAGGTAATGCAATGCTCTCCTTGGTGTACGGAAATGGcaaaagaattaagaaagataGAAGGGCAAGCAATGAGGTTGAGGTATTCAGTTATGAAAGCATCGTTGCTGCTACAAACAATTTTTCAACTGATAATAAGTTAGGAGAAGGAGGTGGCTATATGTCTCCGGAGTATGCAATGCATGGTATTGTATCGACAAAAGCGGATGTATTCAGCTTCGGTGTACTACTACTAGAGATTCTTAGCGGCAAGAAGAATAACAGTCGCTATGATTCAAACCGTTCACTTAGTCTCATAGGATATGTAAGCTGCAATCGCAAAAGTAGAACTCCAATTATTCCCACTGCTCCTGCTCCAGTTGTTCATCATATTATCCATGATCCACTCTTGTGTATTGGAATTGAAGAACTTGTTCCAATAGATGGGATTAACTAA 1890 0.4259 MTKLIMILPLLFFLPIISFSSTSQDVAVYWGQNGNEGSLNDTCATGKYTIVIIAFLYAFGNNQTPQLNLAGHCDPSPSSSSSSPCTDVSSHVRYCQSRGIKVILSIGGGFDTYNLSSPEDARNLSDYLWNNFLYYTDDSSSSSSSRPLGDSTLDGIDFDVEESTPFLEDLARALKSHSGETKRVYLSAAPQCPFPDPPLGSVLNTGLFDYVWIQFYNHPPCEYTQGNEENFMRNWNQWTTSLKTTKIFMGLPASQDATPTGYVPADLLVSKVVPMVKKSENYGGIMLWSRYYDRVSGYSSVIQNGSVCEVEIRSTSGCGDDDDESSNGFVEGFGYMTRESYKVYESGNLGVLCCEMICRRNCSCVGYAIVNEVDDSGCQIWGRGSTFLQDSGANGKPIYVLQHNYKGNTSLPHSGLKGNGSAYIPSFGVNGRQNFIVKHKVIWLIILIGAILTIPLICYFCFAFRRKHKAKVDRKMKQMKILHEIGGNAMLSLVYGNGKRIKKDRRASNEVEVFSYESIVAATNNFSTDNKLGEGGGYMSPEYAMHGIVSTKADVFSFGVLLLEILSGKKNNSRYDSNRSLSLIGYVSCNRKSRTPIIPTAPAPVVHHIIHDPLLCIGIEELVPIDGIN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0333 629 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 24 309 IPR001223 GO:0005975
Sto9g0333 629 Pfam Protein tyrosine and serine/threonine kinase 537 580 IPR001245 GO:0004672|GO:0006468
Sto9g0333 629 Gene3D Transferase(Phosphotransferase) domain 1 509 610 - -
Sto9g0333 629 PANTHER ENDOCHITINASE 6 304 - -
Sto9g0333 629 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 153 161 IPR001579 GO:0004553|GO:0005975
Sto9g0333 629 PANTHER ACIDIC ENDOCHITINASE 6 304 - -
Sto9g0333 629 Gene3D Glycosidases 24 306 - -
Sto9g0333 629 SUPERFAMILY (Trans)glycosidases 22 302 IPR017853 -
Sto9g0333 629 Pfam Glycosyl hydrolases family 18 26 293 IPR001223 GO:0005975
Sto9g0333 629 SUPERFAMILY Protein kinase-like (PK-like) 537 584 IPR011009 -
Sto9g0333 629 CDD GH18_hevamine_XipI_class_III 25 304 IPR045321 -
Sto9g0333 629 Pfam PAN-like domain 349 382 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0333 Sto-Chr9 3144950 3154731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0333 1 302 Glycoside Hydrolase AT5G24090 52.427 2.75e-114 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto9g0333 Glyco_hydro_18 2.7e-26 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0333 K01183 - lang:109358482 527.709