Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0308 ATGATGGCTGGAAACCCTAATTGGTGGAGCATGCATCCACCATCTTTGATTCCTCTTGGAGTtggatcttcttcttcttcttcttcaattcctCCTTTGAATTTCATGGCAGAAACTCAAGAACCCACTCACTCATGGAGCCAAATGCTTTTCGCTGGATTACccggagaagaagagagaatggGTTTGATGAGTCAATATTTTGAAACAAAGAAGTTTGAAAAttgggaagaaggagaagaagaagaagagcataaAGCTTCTGTTATTGATGTGATAAAGCAAGAGGTTTCCCAAAGTGGCAACTTGTACGGCCATGATCACCAACAATTATTTCAGATGCCTTCTTCtacacctcctcctcctcaatATGCCTCTTGTAACTCTCGTCTAATCACTAGCTTAATTAATACTTCTACTAATGTATTGGATTTCACTCACCACAACAAGCAAGATCATAAGAAGACCCAACTACCACATCACCCAtctcagTGTAATAATAGCACAGCTTCTGGTAATAAGAAGGCTAGGGTTCACTCATCTCCAAGCCAACCTCCTCTCAAGGTGAGAAAAGAGAAGCTAGGTGATAGAATAACAGCACTTCACCAGCTAGTTTCCCCATTTGGAAagACTGACACAGCTTCTGTCTTGTTAGAAGCCACTGGATATATTAGATTCCTTCAAGCTCAAATTCAGGCTCTGAGTTCTCCATACTTGGCCAAAGCATCAAAAAACATGAGGAATCAACACTCTttaaaggtacATGGAGAAAGAAATGCTGTGTTTCCTGAGGACCCGggtcagCTGTTGAATGACACTCATGGCCTGAAAAGAAAAGGAGCTACAATTTCAAACCAGGATGGAGAAGAAAAGGGAAAGGATTTAAGGAGTAGAGGGTTGTGCTTAGTGCCTGTGTCTTGCACCCAACATGTTGGAAGTGAAAATGGAGCTGATTATTGGGCACCACCTTATGGCAGCGGATTTTAA 987 0.3627 MMAGNPNWWSMHPPSLIPLGVGSSSSSSSIPPLNFMAETQEPTHSWSQMLFAGLPGEEERMGLMSQYFETKKFENWEEGEEEEEHKASVIDVIKQEVSQSGNLYGHDHQQLFQMPSSTPPPPQYASCNSRLITSLINTSTNVLDFTHHNKQDHKKTQLPHHPSQCNNSTASGNKKARVHSSPSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEATGYIRFLQAQIQALSSPYLAKASKNMRNQHSLKVHGERNAVFPEDPGQLLNDTHGLKRKGATISNQDGEEKGKDLRSRGLCLVPVSCTQHVGSENGADYWAPPYGSGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0308 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
Sto9g0308 328 PANTHER OS05G0228400 PROTEIN 25 315 - -
Sto9g0308 328 MobiDBLite consensus disorder prediction 150 188 - -
Sto9g0308 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 239 IPR036638 GO:0046983
Sto9g0308 328 CDD bHLH_AtbHLH_like 188 235 IPR045239 -
Sto9g0308 328 MobiDBLite consensus disorder prediction 160 180 - -
Sto9g0308 328 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 25 315 - -
Sto9g0308 328 Gene3D - 188 253 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0308 Sto-Chr9 2880275 2885047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0308 56 269 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.118 1.88e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0308 - - gmx:100802121 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0308 9 2880275 2885047 Sto9g0308 9 2880275 2885047 ECH