Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0300 ATGGCAGGCATAGCTTTCGGCCGCTTGGATGATTCTTTCAGTTTGGCCTCCATTAAGGCCTATATTGCTGAGTTCATTTCCACCTTGGTCTTTGTTTTTGCTGGTGTTGGTTCAGCCATAGCCTTTGGTAAGTTGACTTCTGGTGCAGCTCTTGATCCTGCAGGGTTGGTAGCAATTGCAGTTTGCCATGGTCTTGCTCTGTTTGTTGCTGTTGCTATTGGTGCCAACATTTCTGGCGGACATGTTAACCCAGCCGTCACCTTCGGATTGGCTGTTGGTGGCCAGATCACCATCCTCACTGGTATCTTCTACTGGATTGCTCAGCTTCTTGGCTCCATTGTGGGATGCTTACTCCTCAAGTTTGTCACTGGAGGCTTGGATACCCCAATCCACAGTGTAGCCGCAGGAGTGGGAGCCATTGAAGGAGTAGTGATGGAGATCATCATCACATTCGCATTGGTGTACACAGTGTACGCCACAGCAGCCGACCCTAAGAAGGGCTCACTGGGCACAATCGCACCCATCGCCATTGGGTTCATTGTGGGAGCCAACATCTTGGCGGCCGGCCCATTCTCCGGCGGTTCGATGAACCCGGCTCGGTCGTTCGGTCCGGCCGTGGTGAGCGGTGACTTCCACGAGAACTGGATCTACTGGGTGGGACCACTCATCGGCGGCGGGTTGGCGGGTCTGATATACGGAAATGTGTTCATAAGCTCCGACCACGCACCTCTGTCCAAGGGCGGTTCCTCTGGTTCAGTGGAGGCGGCCTCCGACTTTGAATCCCTCTCTGGGACTGTGCCTACGGCTCTAATTTTGGTTCTCACGAAGCTGGGACGCTTAGGGTTGAAGTTATTGAGGGATTTTTTGGTGGGTTTTGAGAAGCAGATGAAGTTATGGGAatgtgatgaagaagaagaagataaagctTGA 930 0.514 MAGIAFGRLDDSFSLASIKAYIAEFISTLVFVFAGVGSAIAFGKLTSGAALDPAGLVAIAVCHGLALFVAVAIGANISGGHVNPAVTFGLAVGGQITILTGIFYWIAQLLGSIVGCLLLKFVTGGLDTPIHSVAAGVGAIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHENWIYWVGPLIGGGLAGLIYGNVFISSDHAPLSKGGSSGSVEAASDFESLSGTVPTALILVLTKLGRLGLKLLRDFLVGFEKQMKLWECDEEEEDKA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0300 309 Gene3D Glycerol uptake facilitator protein. 2 246 IPR023271 -
Sto9g0300 309 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Sto9g0300 309 SUPERFAMILY Aquaporin-like 15 239 IPR023271 -
Sto9g0300 309 CDD MIP 19 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto9g0300 309 TIGRFAM MIP: MIP family channel proteins 23 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto9g0300 309 PANTHER AQUAPORIN-8 1 245 IPR034294 -
Sto9g0300 309 PANTHER MIP PROTEIN 1 245 - -
Sto9g0300 309 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto9g0300 309 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto9g0300 309 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto9g0300 309 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto9g0300 309 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto9g0300 309 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto9g0300 309 Pfam Major intrinsic protein 14 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0300 Sto-Chr9 2818231 2825158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0300 1 246 Major Intrinsic Protein MIP AT3G16240 83.806 6.96e-145 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0300 K09873 - rcu:8273814 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0300 9 2818231 2825158 Sto9g0300 9 2818231 2825158 ECH