Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0287 ATGAAACCAACAATTCCTTCAAAAAGCATTGCCCCCAGTAACAGTACTTTTCTTCCTCTGCTTTCTCTTTCAGCTAGGGTTCAGGGAACGTTTCTGGGGTTTCAGATCGTTGCTGTTCTTTCACTTGAGGATGGTAAACTAGCAATGGACAACGGCAAGTATGTCCGTTATACACCTGAGCAGGTTGAAGCCCTCGAGAGGCTCTATCATGAATGTCCAAAACCCAGTTCCATTCGTCGCCAGCAGCTTATCCGTGAATGTCCAATTCTCTCAAACATTGAGCCAAAGCAAATCAAGGTTTGGTTCCAGAATAGAAGATGTAGGGAGAAGCAAAGGAAAGAAGCTTCACGCCTTCAAGCTGTAAATAGGAAGCTGACAGCTATGAACAAGCTTCTGATGGAAGAGAATGATAGGTTGCAGAAACAGGTGTCTCAACTGGTGTATGAAAATGGCTACTTCCGCCAACATACACAAAATACTACACTGGCAACCAAAGACACAAGCTGCGAGTCGGCTGTGACGAGTGGCCAACACAGTTTGACAACTCAGCATCCTCCAAGGGATGCAAGTCCTGCAGGGCTTTTGTCCATTGCAGAAGAGACTTTAGCAGAGTTTCTTTCGAAGGCTACTGGAACTGCTGTTGAGTGGGTTCAGATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCAATATCTCATGGTTGCACTGGTGTGGCAGCTCGCGCCTGTGGCCTAGTGGGTCTAGAACCCACAAGGGTCGCAGAAATCCTCAAGGATCGGCCGTCATGGTTTCGTGATTGCCGAGCTGTTGATGTTCTAAACGTGCTGCCCACGGCAAATGGTGGAACCATAGAGTTGCTTTATATGCAGCTATATGCGCCAACCACATTGGCTCCTGCTCGGGACTTTTGGTTGTTGCGCTACACTTCTGTTTTAGAAGATGGAAGCTTTGTGATCTGTGAGAGGTCTCTTAAAAATACTCAAAATGGTCCAAGCATGCCACCTGTTCAGCATTTTGTGAGAGCAGAGATGCTGCCTAGTGGGTATCTGATAAGACCTTGTGAAGGGGGTGGTTCTATCATCCACATAGTTGATCATATGGATTTGGAGCCTTGGAGTGTGCCAGAAGTATTGCGTCCCCTATATGAATCATCAACAGTGCTAGCTCAGAAGAAAACAATGGCGGCCTTACGTCAGCTGAGGCAGTTGTCTCACGAGGTTTCTCAACCAAATGTCACTGGGTGGGGCAGACGACCTGCAACACTACGGGCGCTGAGCCAGAGATTGAGCCGGGGTTTCAATGAGGCTCTTAATGGGTTTACTGATGAGGGGTGGTCAGTGATTGGAAACGATGGCATAGATGATGTTACGATTATGGTTAATTCATCTCCGGAGAAGTTAATGGGATTAGATCTTTCTTTTGCCAATGGATTTCCATCTGTCAGTAATGCTGTCTTATGTGCTAAAGCATCAATGCTATTACAGAATGTGCCTCCAGCCATTCTCCTGAGGTTCCTACGGGAACACAGATCAGAATGGGCCGACAACAACATGGATGTTTACTCAGCCGCTGCCATAAAAGTTGGTCCGTGTAGCTTACCTGGATCACGTGCTGGAAATTATGGAGGTCAAGTTATACTTCCACTGGCCCACACTATCGAGCACGAAGAGTTTCTGGAAGTCATTAAATTGGAAGGAATTGCTCATTCTCCTGAAGACACAATAATGCCGAGAGAGATGTTTCTTTTGCAACTCTGCAGTGGAATGGATGAGAATGCTGTTGGCACCTGTGCTGAACTTATATTTGCTCCAATCGATGCTTCCTTTGCTGATGATGCCCCCCTTTTACCCTCCGGGTTTCGCATCATTCCTCTTGATTCtgggaagGAAGCATCCAGTCCAAATCGCACCCTCGACCTTGCATCTGCACTCGACATCGGCCCCACTGGGAATAAATCTTCTAGTGACTATGCTGGCAACTCTGGCTGTATGAGATCTGTTATGACTATAGCCTTTGAATTTGCTTTTGAAACTCATATGCAAGAGCATGTAGCATCGATGGCACGGCAGTATGTTCGCAGCATCATATCATCTGTCCAAAGGGTGGCATTAGCACTTTCTCCTTCTCATTTGAATTCACAAGCTGGGCTTAGAACACCATTGGGCACCCCCGAAGCGCAGACACTTGCTCGTTGGATATGCAACAGTTACAGGTGCTACTTAGGTGTGGAGCTACTCAAATCTAGTAATGATGGGAATGAATCCATTCTTAAGTCCTTGTGGCACCACTCAGATGCAATATTGTGCTGCACTTTAAAGGCATTGCCCGTATTCACTTTCGCGAACCAGGCAGGGCTTGACATGCTAGAAACAACCTTAGTTGCACTACAAGACTTGGTTTTAGAGAAGATATTCGATGATCATGGACGAAAAATTCTGTGTTCAGAGTTTCCCCAGATTATACAACAGGGATTTGCGTGCCTTCAAGGTGGCATCTGTCTGTCGAGCATGGGGCGGCCGGTATCGTACGAGAGAGTAGTGGCTTGGAAGGGACCCACCAGACCAGGAATTGAACATGTGTATTTTGAAGATGAATCACTCTGTACTAAGAGTCTTAAGACCTTATGTTATGTTTGGTTGCTTTGTTTGCTATCATCAAGACTTGGATTTGCATGA 2685 0.4629 MKPTIPSKSIAPSNSTFLPLLSLSARVQGTFLGFQIVAVLSLEDGKLAMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLATKDTSCESAVTSGQHSLTTQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSFVICERSLKNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKKTMAALRQLRQLSHEVSQPNVTGWGRRPATLRALSQRLSRGFNEALNGFTDEGWSVIGNDGIDDVTIMVNSSPEKLMGLDLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDVYSAAAIKVGPCSLPGSRAGNYGGQVILPLAHTIEHEEFLEVIKLEGIAHSPEDTIMPREMFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPNRTLDLASALDIGPTGNKSSSDYAGNSGCMRSVMTIAFEFAFETHMQEHVASMARQYVRSIISSVQRVALALSPSHLNSQAGLRTPLGTPEAQTLARWICNSYRCYLGVELLKSSNDGNESILKSLWHHSDAILCCTLKALPVFTFANQAGLDMLETTLVALQDLVLEKIFDDHGRKILCSEFPQIIQQGFACLQGGICLSSMGRPVSYERVVAWKGPTRPGIEHVYFEDESLCTKSLKTLCYVWLLCLLSSRLGFA 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0287 894 ProSiteProfiles 'Homeobox' domain profile. 48 112 IPR001356 GO:0003677
Sto9g0287 894 PANTHER CLASS III HD-ZIP PROTEIN CNA1 40 853 - -
Sto9g0287 894 Coils Coil 108 149 - -
Sto9g0287 894 SMART START_1 196 406 IPR002913 GO:0008289
Sto9g0287 894 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 40 853 IPR044830 GO:0003700
Sto9g0287 894 Pfam START domain 197 404 IPR002913 GO:0008289
Sto9g0287 894 SUPERFAMILY Bet v1-like 433 632 - -
Sto9g0287 894 SMART HOX_1 50 116 IPR001356 GO:0003677
Sto9g0287 894 MobiDBLite consensus disorder prediction 168 190 - -
Sto9g0287 894 SUPERFAMILY Bet v1-like 196 391 - -
Sto9g0287 894 CDD bZIP 105 144 - -
Sto9g0287 894 Gene3D - 47 119 - -
Sto9g0287 894 CDD START_ArGLABRA2_like 191 406 - -
Sto9g0287 894 CDD homeodomain 53 113 IPR001356 GO:0003677
Sto9g0287 894 Gene3D - 231 411 IPR023393 -
Sto9g0287 894 ProSiteProfiles START domain profile. 187 402 IPR002913 GO:0008289
Sto9g0287 894 SUPERFAMILY Homeodomain-like 52 116 IPR009057 -
Sto9g0287 894 MobiDBLite consensus disorder prediction 168 186 - -
Sto9g0287 894 Pfam MEKHLA domain 731 853 IPR013978 -
Sto9g0287 894 Pfam Homeodomain 53 111 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0287 Sto-Chr9 2704257 2711255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0287 40 826 Homeobox Transcription Factor Family AT1G52150 85.823 0.0 1413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sto9g0287 START 5.1e-54 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0287 K09338 - zju:107428556 1543.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0287 9 2704257 2711255 Sto1g0298 1 2258422 2265443 CCT
Sto9g0287 9 2704257 2711255 Sto9g0287 9 2704257 2711255 ECH