Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0283 ATGCCGGTACTGCGTAGTGGAGTGCGCAGGGGCCGACCAGCAGCGAAGCAGAAGGAAGAGAAGCAGCAACTTAATCCGATCCAAGAAGGGGAAGCGATTGCTACGAGGACAAGGAGGAGGCGGGCAGCGGCGGCGGCGTTAGCGGCAGGGACGAAGGATAACGAGCAACAGCCACAGCAGCAGGTAGTGATCAATGACAACCTAGTTGCTCCGgctgGTTTGGACGAAGCTTGTCCTGTTGGGACTGCCGGTGACGTGGGTGTCGATTGTGGAGCGGAGGAAGAGGAGATAGGAGAGAAGCAAATGGACGATAACGATAGCGGACCTAACGATAAGGCCAATGTCGGTGAAGATGAGGGGAGCACAGCTCCGGTTCCTGAGAAGGTTCAAGTTGGTGGTTCCCCTAtgtataaaatagaaaaaaaattgggcaAGGGTGGATTTGGACAAGTCTATGTTGGTCGCCGCATGAATGCTGAAAATACGAGTGAGAGAACTGGACCTGGAGCTGTGGAGGTTGCATTGAAATTTGAGCATAGGAGTAGTAAAGGTTGTAACTATGGGCCACCACATGAGTGGCAAGTATACAACACTCTTGGTGGCAGTCATGGTGTGCCAAAAGTACACTACAAGGGCAGGCAAGGTGACTATTATATCATGGTTATGGATATGCTGGGACCTAGCTTGTGGGATGTCTGGAATAATAACTCTCATACAATGTCCACTGAAATGGTTGCGTGTATTGCCATTGAAGCAATATCCATATTGGAGAAGATGCACTCTCGAGGGTATGTGCATGGGGATGTGAAGCCCGAAAATTTTCTGCTTGGTTCTCCTGGGTCCCCTGATGAGAAAAGATTGTTCCTTGTTGATCTTGGATTAGCTACTAGATGGCGGGATAATACAACAGGTTTGCATGTGGATTATGACCAAAGGCCAGATGTTTTCAGGGGCACAGTTCGCTACGCAAGTGTACATGCACATTTAGGGAGAACTGCCAGTAGGAGGGATGATCTGGAATCTCTCGCTTATACCCTGGTTTTTCTTCTTCGAGGTCGTCTCCCTTGGCAGGGATACCAGGGAGAAAACAAAGGGTTTTTTGTTTGCAAAAAGAAGATGGGAACAACTCCGGAGGCCCTGTGTTGCTTCTGCCCCCAGCCCTTTAAGCTGTTTGTTGAACATGTAGTGAATTTGAAGTTTGATGAAGATCCTAACTATGCAAAATATATTTCTCTGTTTGATGGAATTGTTGGTCCAAATCCAGATATTAGACCAATTAATACAGAAGGTGCACAAAAGCTCATTGGTCATAAGAGAAGTCGTATGACCATGGAAGAAGACGATGAACAACCAAAAAAGAAGTTCCGTATGGGTCTGCCAGCAACACAGTGGATAAGTATATACAATGCTCGTAGACCAATGAAACAAAGATATCACTACAATGTGTCGGATACAAGGCTATCGCAGCACATTGACAAAGGAAATGAGGATGGCTTGTATATAAGCTGTGTGGCTTCATGTTCGAACCTGTGGGCTATAATCATGGATGCAGGCACTGGTTTCACAGACCAAGTTTATGAACTCTCACCTTGCTTTCTCCATAAGGAATGGATAATGGAGCAGTGggaaaaaaattactatatcaGTGCAATTGCAGGAGCTACAAATGGGAGCTCATTAGTAGTCATGTCTAAGGGTACAACTTATGTGCAGCAATCTTACAAAGTTAGCGATTCGTTTCCTTTTAAGTGGATTAATAAGAAATGGAGGGAAGGCTTCTACGTTACAGCAATGGCCACCTCAGGGATCAGATGGGCAGTAGTTATGTCTCGTGGTGCAGCATTTTCTGACCAGGTGGTTGAACTAGATTTTCTTTATCCGAGCGAAGGAATTCACAAGCGATGGGATTGTGGATACCGCATCACTGCGACTGCTGCAACTTGGGACCAAGCTGCACTAGTCCTCAGTGTGCCAAAGAGGAAGCCTGCAGATGAAACACAAGAAACACTCAGAACTACTGCTTTTCCTAGTACGCATGTTAAGGAAAAATGGGCGAAGAACCTCTATATTGCATCAGTTTGCTATGGACGAACAGTTTCTTGA 2103 0.4546 MPVLRSGVRRGRPAAKQKEEKQQLNPIQEGEAIATRTRRRRAAAAALAAGTKDNEQQPQQQVVINDNLVAPAGLDEACPVGTAGDVGVDCGAEEEEIGEKQMDDNDSGPNDKANVGEDEGSTAPVPEKVQVGGSPMYKIEKKLGKGGFGQVYVGRRMNAENTSERTGPGAVEVALKFEHRSSKGCNYGPPHEWQVYNTLGGSHGVPKVHYKGRQGDYYIMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGSPGSPDEKRLFLVDLGLATRWRDNTTGLHVDYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFFVCKKKMGTTPEALCCFCPQPFKLFVEHVVNLKFDEDPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRSRMTMEEDDEQPKKKFRMGLPATQWISIYNARRPMKQRYHYNVSDTRLSQHIDKGNEDGLYISCVASCSNLWAIIMDAGTGFTDQVYELSPCFLHKEWIMEQWEKNYYISAIAGATNGSSLVVMSKGTTYVQQSYKVSDSFPFKWINKKWREGFYVTAMATSGIRWAVVMSRGAAFSDQVVELDFLYPSEGIHKRWDCGYRITATAATWDQAALVLSVPKRKPADETQETLRTTAFPSTHVKEKWAKNLYIASVCYGRTVS 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0283 700 ProSitePatterns Protein kinases ATP-binding region signature. 143 176 IPR017441 GO:0005524
Sto9g0283 700 SMART serkin_6 137 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0283 700 Pfam Protein kinase domain 137 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0283 700 MobiDBLite consensus disorder prediction 96 130 - -
Sto9g0283 700 PANTHER - 94 674 - -
Sto9g0283 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Sto9g0283 700 Gene3D Transferase(Phosphotransferase) domain 1 105 459 - -
Sto9g0283 700 CDD STKc_CK1 136 413 - -
Sto9g0283 700 SUPERFAMILY Protein kinase-like (PK-like) 137 417 IPR011009 -
Sto9g0283 700 PANTHER CASEIN KINASE-RELATED 94 674 - -
Sto9g0283 700 MobiDBLite consensus disorder prediction 1 60 - -
Sto9g0283 700 ProSiteProfiles Protein kinase domain profile. 137 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0283 Sto-Chr9 2666791 2672239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0283 88 362 AGC Kinase Gene Family AT3G08730 25.271 9.81e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Sto9g0283 Pkinase 4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0283 - - zju:107435330 1190.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0283 9 2666791 2672239 Sto1g0301 1 2285914 2291199 ECH
Sto9g0283 9 2666791 2672239 Sto9g0283 9 2666791 2672239 ECH