Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0275 ATGACAAGGCGGTGCTCGCACTGCAGCAACAACGGACATAACTCTCGAACATGTCCGTCCCGCGGTGGTGGCGCCGCCGGCAGCGGCAGTAGCGTAAGGCTGTTCGGTGTTAGACTCACTGATGGATCAATAAAAAAGAGCGCGAGCATGGGAAATCTCTCTGCTTATTACCATTCTTCATCATCTGCTGCTGGATCACCGAATCCTAGCTCGCCTTGTTCCGACACTCTTCGTGACCCCATTCCTGAAGCCGACGGATACTTGTCCGATGATCCATCTCATGGTTCTACAAACCGTCgtggagaaagaaagaaagGTGTTCCGTGGACTGAAGAAGAGCATCGAATGTTCTTAATTGGTCTTCAAAAGCTGGGTAAAGGAGACTGGCGTGGCATAGCACGCAATTTCGTTGTATCAAGGACTCCTACTCAAGTAGCAAGTCATGCTCAGAAGTACTTCATCCGACAGAGTAATGCAACTCGAAGGAAGAGACGTTCCAGCCTTTTTGACATGGTTCCAGATATGGCTTCAGATCCACCTTCAGTGCCAGAAGAACAAGTATTATTGCCACCTGAGAACTCACAACCTGACACAAAATCGCAACCATCCTTGGATCTTTCCCTCAAGTCAGAATTTGAACCCATGGAAACTAATTGCCAGGAAAACGTGGAAGAGCCCAATGAAACTATGATAAGATCAAGTGGGATGATTCCAGTGGCTGCTGGATTCATGCCAACATATGTACCTATCCACTTTTCCATATGGCCATCAAATGTTGCAGCTCCTTTTGAACAAGTTAACGGGATCGAGACATCTCATCATCAAGTCCTTAAGCCAATACCAATTGTTCCCAAGGAACCTGTGAATGTTGATGAACTTGTTGGCATGTCTCAACTGAGTCTTGGGGAAACACAAATACGCGATAGAGAGCCGTCACCACTTTCCTTGAAGTTGCTAGGAGAGCCCTCGAGGCAATCTGCATTCCATGCAAATGCTCCAGTTGGTAGTTCAGATTTAAACAATGGCAAGAACAGTCCAATTCAAGCGGTTTGA 1053 0.4625 MTRRCSHCSNNGHNSRTCPSRGGGAAGSGSSVRLFGVRLTDGSIKKSASMGNLSAYYHSSSSAAGSPNPSSPCSDTLRDPIPEADGYLSDDPSHGSTNRRGERKKGVPWTEEEHRMFLIGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVPDMASDPPSVPEEQVLLPPENSQPDTKSQPSLDLSLKSEFEPMETNCQENVEEPNETMIRSSGMIPVAAGFMPTYVPIHFSIWPSNVAAPFEQVNGIETSHHQVLKPIPIVPKEPVNVDELVGMSQLSLGETQIRDREPSPLSLKLLGEPSRQSAFHANAPVGSSDLNNGKNSPIQAV 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0275 350 CDD SANT 108 153 IPR001005 -
Sto9g0275 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 157 IPR017930 -
Sto9g0275 350 ProSiteProfiles Myb-like domain profile. 101 153 IPR001005 -
Sto9g0275 350 MobiDBLite consensus disorder prediction 329 350 - -
Sto9g0275 350 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 104 156 IPR006447 GO:0003677
Sto9g0275 350 MobiDBLite consensus disorder prediction 57 108 - -
Sto9g0275 350 ProSiteProfiles SANT domain profile. 109 157 IPR017884 -
Sto9g0275 350 MobiDBLite consensus disorder prediction 171 204 - -
Sto9g0275 350 SMART sant 105 155 IPR001005 -
Sto9g0275 350 Gene3D - 109 158 - -
Sto9g0275 350 MobiDBLite consensus disorder prediction 1 18 - -
Sto9g0275 350 PANTHER OS01G0187900 PROTEIN 1 344 - -
Sto9g0275 350 MobiDBLite consensus disorder prediction 57 75 - -
Sto9g0275 350 PANTHER TRANSCRIPTION FACTOR KUA1 1 344 - -
Sto9g0275 350 SUPERFAMILY Homeodomain-like 103 158 IPR009057 -
Sto9g0275 350 Pfam Myb-like DNA-binding domain 108 153 IPR001005 -
Sto9g0275 350 MobiDBLite consensus disorder prediction 327 350 - -
Sto9g0275 350 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0275 Sto-Chr9 2592330 2595399 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto9g0275 Myb_DNA-binding 2.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0275 - - gmx:778036 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0275 9 2592330 2595399 Sto9g0275 9 2592330 2595399 ECH