Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0273 ATGAATGGACAACAAGAGGAGGTGTCTCCTCAGCTTCTGGATTTAATCTCCAAAGATAATAACAGAGAGTGGCATATGGACAgagattcttcttcttcttcagaggAGAGAAAGCTTGAGCTTAGACTTGGTCCTCctggtgaagaagaagaagaaggagaagaagactcTTTACTCTCTCTGGGTTACTTCTCAACTCCCACCACCATTAATGGAAGCCAAACCCTGAAGAAAAAAATCACtactttgtcttctccttggaCTCAGAATAATCAACACAACAATGGGGTTTCATCATTTCTTcagtcatcatcatcatcatcaaagcCCTCTTCTGCAACAAATACAGCTGTACCCAACAGCTCTCAGAAAAGAACTGCTCCTGGTCCTGTGGTGGGATGGCCTCCAATTCGTTCCTTTAGGAAGAATCTTGCAAGCACTAGTGTCTCTTCCAAGACACAATCACCCCATGAGTCCCAGAATCATCAGCATGTGGACAAGCTTGCTGGGAAGAAACATGTTTTGGTTGAAAACAACAACGTTGGTGTTGTTGTTGGTGGTGGTAAAGGCTTGTTTGTTAAGATCAATATGGATGGAGTTCCCATTGGGAGAAAAGTGGACCTAAATGCTTATGATAGCTATGAAAAACTTTCCACTGCTGTTGATGAACTCTTCAGAGGCCTTCTTGCTGCTCAAAGAGATTCCTGTGCTGGTAAAATTCAGAACAAGCAAGAAGATAAAGCCATTACAGGAGTGTTGGATGGAAGTGGTGAATACACACTTGTTTATGAGGATAATGAAGGAGACAGAATGCTTGTTGGGGATGTTCCATGGCACATGTTCGTATCTACAGTGAAGCGGCTGCGCGTGCTCAAGAGTTCTGAGCTTTCGGCCTTTACTCGTGAGTTTTGA 912 0.386 MNGQQEEVSPQLLDLISKDNNREWHMDRDSSSSSEERKLELRLGPPGEEEEEGEEDSLLSLGYFSTPTTINGSQTLKKKITTLSSPWTQNNQHNNGVSSFLQSSSSSSKPSSATNTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASTSVSSKTQSPHESQNHQHVDKLAGKKHVLVENNNVGVVVGGGKGLFVKINMDGVPIGRKVDLNAYDSYEKLSTAVDELFRGLLAAQRDSCAGKIQNKQEDKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTREF 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0273 303 MobiDBLite consensus disorder prediction 86 166 - -
Sto9g0273 303 MobiDBLite consensus disorder prediction 1 57 - -
Sto9g0273 303 PANTHER AUXIN-RESPONSIVE PROTEIN IAA26 11 300 - -
Sto9g0273 303 Gene3D - 186 302 - -
Sto9g0273 303 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 300 IPR003311 GO:0005634|GO:0006355
Sto9g0273 303 MobiDBLite consensus disorder prediction 18 46 - -
Sto9g0273 303 MobiDBLite consensus disorder prediction 1 16 - -
Sto9g0273 303 MobiDBLite consensus disorder prediction 141 158 - -
Sto9g0273 303 SUPERFAMILY CAD & PB1 domains 189 290 - -
Sto9g0273 303 ProSiteProfiles PB1 domain profile. 190 293 IPR000270 GO:0005515
Sto9g0273 303 Pfam AUX/IAA family 39 298 IPR033389 -
Sto9g0273 303 MobiDBLite consensus disorder prediction 86 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0273 Sto-Chr9 2569341 2571562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0273 194 300 B3 DNA Binding Superfamily AT4G23980 34.579 5.35e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Sto9g0273 AUX_IAA 1.1e-71 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0273 K14484 - gmx:100804593 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0273 9 2569341 2571562 Sto1g0309 1 2401780 2403952 ECH
Sto9g0273 9 2569341 2571562 Sto9g0273 9 2569341 2571562 ECH