Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0272 ATGAATCTTGTACGGAAACCCCACTTGAAGAATTTGCCTCTGCTGCTTCACTTTCTCCTCTTCCTTCTCCATTTTCACTTCCTCTGTTCCTATGGCTATTATTATACCACACAGCCCTTGAGATGTACGGACACATCCCGCGTGTGCACTTCTTTCTTGGCCTTCAAGCCTCGGCCAAATCAAACCTTAGCCTTAGTTCAGAGCATGTTTGATGTATTGCCCAATGACGTCACTGTTGAAGAAGGCATGGGGGGATACATATTCATCAGAAAGAACTGTTCTTGTGCTGCTGGTATGAAGAAATATGTATCCAATACCACTTTTACAGTGAAATCCAGTGAAGGGTTTGTGGATGATTTGGTGATGAAGGCATATGATGGGCTTTCTTTGTGGCCCAACACAAGCAGGAGGAGGGCCAAAAACGGTGCCGTTATAGCAGTGAGGTTGTTTTGTGGGTGTTCAAGTGGGCCATGGAACTATATGGTGAGTTATGTGATGAGAGAAGGGGATAGTGTTGCTTCTTTGGCTAGTCGGTTTGGAGTTAGTATGGATAGTATAGAGATGTTAAATGGCATCAAGAATCCTGATAATGTCACTGTGGGTTCTCTCTATTACATACCTTTGAATTCTGTTCCTGGTGAGCCATATTCCCTGAAGAATGATACTTCTTCAGCTCCAATTCCTGCTCCATCTATTGACACTCATTCTGATATACGGATCGACGCGATCGAAGTGGAGAATCCGGTAGTTTTCACATTTGAAGAGATTTTTTCTTCAACTGATGGTTTCTCTGATTCAAATCTACTTGGGAATGGAACTTATGGTTCTGTTTATTATGGCTTTCTTCGTGACCAGGAGGTTGCTATTAAGAGAATGACTGCTACAAAAACTAAAGAATTCTTAGCAGAGATGAAAGTTCTGTGCAAGGTTCATCATGCAAATCTGGTAGAATTGATCGGCTACGCGGCTAGTCATGATGagctttttcttatttatgaaTATGCCCAAAAAGGTTCACTTGGCAGCCATTTTCATGATACTCAGACTAAGGGTTCCTCCTCACTTTCTTGGATCATGAGGGTTCAGATAGCACTTGATGCTGCTAGAGGCCTTGAATACATACATGAGCACACCAAAACTCATTATGTCCATAGAGATATTAAGACAAGCAACATCTTACTTGATGCTTCCTTTAGAGCAAAGatTTCAGATTTCGGGTTAGCGAAACTTGTCGGGAAAGTCAACGAGGGAGAAATTAAGTGCACTAAAGTTGTTGGCACATATGGTTATCTTGCTCCAGAATACTTGAGTAATGGCTTTGCAACAACCAAAAGTGATGTCTATGCATTTGGCATTGTTCTTTTTGAGATTATATCAGGCAAGGGAGCCACTATTCGGACGGAAGGCACAGTGACAAAAAATCCCGAAAGACGTTCACTAGCATCTATTATGTTGGCAGCTCTTAGAAATTCACCTGATTCCATGAGTATGTCAAGTTTGAGAGACCATATTGATCCTAATATGATGGACCTATATCCCCATGATTGTGTATTTAAGATGGGCATACTGGCAAAGCAATGTGTGGATGATGACCCAATCTTAAGACCTGATATGAAGCAAGTTGTGATATCCCTTTCACAGATTCTTCTGTCTTCTATTGAGTGGGAAGCCACTCTAGCTGGGAACAGCCAGGTATTCAGTGGGCTTGTTCAAggaagatag 1722 0.4135 MNLVRKPHLKNLPLLLHFLLFLLHFHFLCSYGYYYTTQPLRCTDTSRVCTSFLAFKPRPNQTLALVQSMFDVLPNDVTVEEGMGGYIFIRKNCSCAAGMKKYVSNTTFTVKSSEGFVDDLVMKAYDGLSLWPNTSRRRAKNGAVIAVRLFCGCSSGPWNYMVSYVMREGDSVASLASRFGVSMDSIEMLNGIKNPDNVTVGSLYYIPLNSVPGEPYSLKNDTSSAPIPAPSIDTHSDIRIDAIEVENPVVFTFEEIFSSTDGFSDSNLLGNGTYGSVYYGFLRDQEVAIKRMTATKTKEFLAEMKVLCKVHHANLVELIGYAASHDELFLIYEYAQKGSLGSHFHDTQTKGSSSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLVGKVNEGEIKCTKVVGTYGYLAPEYLSNGFATTKSDVYAFGIVLFEIISGKGATIRTEGTVTKNPERRSLASIMLAALRNSPDSMSMSSLRDHIDPNMMDLYPHDCVFKMGILAKQCVDDDPILRPDMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0272 573 SMART LysM_2 163 207 IPR018392 -
Sto9g0272 573 SUPERFAMILY Protein kinase-like (PK-like) 240 545 IPR011009 -
Sto9g0272 573 SUPERFAMILY LysM domain 162 207 IPR036779 -
Sto9g0272 573 Gene3D Phosphorylase Kinase; domain 1 234 334 - -
Sto9g0272 573 CDD LysM 162 206 IPR018392 -
Sto9g0272 573 ProSitePatterns Protein kinases ATP-binding region signature. 269 290 IPR017441 GO:0005524
Sto9g0272 573 Gene3D LysM domain 157 214 IPR036779 -
Sto9g0272 573 ProSiteProfiles Protein kinase domain profile. 263 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0272 573 Pfam Protein tyrosine and serine/threonine kinase 267 543 IPR001245 GO:0004672|GO:0006468
Sto9g0272 573 ProSiteProfiles LysM domain profile. 162 206 IPR018392 -
Sto9g0272 573 Gene3D Transferase(Phosphotransferase) domain 1 336 559 - -
Sto9g0272 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 382 394 IPR008271 GO:0004672|GO:0006468
Sto9g0272 573 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 234 573 IPR044812 GO:0019199|GO:0045087
Sto9g0272 573 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 41 223 IPR044812 GO:0019199|GO:0045087
Sto9g0272 573 PANTHER BNAA06G02020D PROTEIN 41 223 - -
Sto9g0272 573 PANTHER BNAA06G02020D PROTEIN 234 573 - -
Sto9g0272 573 SMART serkin_6 263 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0272 573 Pfam LysM domain 164 201 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0272 Sto-Chr9 2543498 2548324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0272 244 573 Receptor kinase-like Gene Family AT1G51940 81.212 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sto9g0272 PK_Tyr_Ser-Thr 5.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0272 - - gmx:100796989 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0272 9 2543498 2548324 Sto1g0307 1 2367898 2374510 CCT