Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0270 ATGGGGAAGGCTACCAGGTGGTTGAAGGGCTTGTTGGGGATGAAGAAAGAGAAGGACCACAATTCATCAGCCTCGTCGCCTCCTCCTCCTAAGGAGAAGAAACGATGGAGCTTCGCTAAGTCCGCGAAGGATTCGGGTCCGGAGTCGGGTCGACCCGGGATCGCGCCTTCTGATGCCGCCTGGATCAGATCCTATATTGCTGAAACAGAGAAAGAGCAGAACAAGCACGCGATTGCTGTGGCCGCTGCGACGGCCGCCGCGGCCGATGCTGCCGTCGCCGCCGCTCAAGCCGCCGTGGCGGTGGTGAGGCTGACGAGTCACGGCAGAGGGACGCTGTTCAGCGGAAGCCGGGAGAAATGGGCCGCCGTGAAGATTCAGACCGTCTTCAGAGGCTATTTAGCACGAAAAGCCCTTAGAGCATTGAAAGGACTAGTGAAGATTCAAGCACTGGTTAGAGGGTATCTGGTTCGAAAGCGAGCCGCGGCTACACTTCACAGCATGCAAGCTCTTATCAGAGCCCAAGCCGCCGTTCGATCACAGCGAGCTCGCCGTTCCATCTCCAAAGCTAGAAAATCTATGGAACGAGTGGATGAGACGAGAAGTGAAATCCACAGTAAGAGACTATCAACGACGTCGTATGAGCATTCCTTGAACGGGTATGATGGGAGTCCAAAAATTGTCGAGATAGACACATACAGGACCCAATCTAGATCTCGGAGGATACACACGACATTGTCCGAGTGTGGAGAAGAGGCGGTTCCCTACCAAACGACGCCGTTTCCGTTTTCGTTTCCGGATTCGAAACATCAGCAAATTCGGGATTTCGAATGGTGCTTCAATGGCGACGAATGTAGATTCGCCACCACAGCTCACAGCACTCCTCGTTTCGCCAACTGTGTGCAGAGAGgaagtaataataatagtaataattgtTATAACTCGCCTTCGACGCCGGCGAAGAGTGTGTGTGGTGGTGGGGACACGTTCTTCCGTTGCGGGTACTCGAATTTCCCGAACTACATGGCGAATACGCAGTCGTTTAGGGCGAAAGTGAGGTCGCAGAGTGCGCCGAAGCAGAGGCCGGAGCCGAAGAAGAGGCTTTCGCTGAATGAAATAATGGCGGCGAGGAATAGTATAAGCAGTGTGAGGATGCAGAGGAATTCGTGTTCTCGAGttcaagaagatgatgatgacgagTCATGGAattcttga 1212 0.5173 MGKATRWLKGLLGMKKEKDHNSSASSPPPPKEKKRWSFAKSAKDSGPESGRPGIAPSDAAWIRSYIAETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTLFSGSREKWAAVKIQTVFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQAAVRSQRARRSISKARKSMERVDETRSEIHSKRLSTTSYEHSLNGYDGSPKIVEIDTYRTQSRSRRIHTTLSECGEEAVPYQTTPFPFSFPDSKHQQIRDFEWCFNGDECRFATTAHSTPRFANCVQRGSNNNSNNCYNSPSTPAKSVCGGGDTFFRCGYSNFPNYMANTQSFRAKVRSQSAPKQRPEPKKRLSLNEIMAARNSISSVRMQRNSCSRVQEDDDDESWNS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0270 403 PANTHER IQ-DOMAIN 5-RELATED 1 388 - -
Sto9g0270 403 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Sto9g0270 403 SMART iq_5 117 139 IPR000048 GO:0005515
Sto9g0270 403 SMART iq_5 140 161 IPR000048 GO:0005515
Sto9g0270 403 Pfam IQ calmodulin-binding motif 120 139 IPR000048 GO:0005515
Sto9g0270 403 Pfam IQ calmodulin-binding motif 145 159 IPR000048 GO:0005515
Sto9g0270 403 Pfam Protein of unknown function (DUF4005) 293 386 IPR025064 -
Sto9g0270 403 Gene3D - 60 144 - -
Sto9g0270 403 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 388 - -
Sto9g0270 403 MobiDBLite consensus disorder prediction 355 369 - -
Sto9g0270 403 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Sto9g0270 403 MobiDBLite consensus disorder prediction 1 56 - -
Sto9g0270 403 ProSiteProfiles IQ motif profile. 166 195 IPR000048 GO:0005515
Sto9g0270 403 MobiDBLite consensus disorder prediction 349 403 - -
Sto9g0270 403 MobiDBLite consensus disorder prediction 389 403 - -
Sto9g0270 403 MobiDBLite consensus disorder prediction 373 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0270 Sto-Chr9 2516429 2517912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0270 1 384 IQD Protein Family AT3G16490 56.818 4.04e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0270 - - gmx:100797686 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0270 9 2516429 2517912 Sto9g0270 9 2516429 2517912 ECH