Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0262 ATGGTAGTAGCACTTTTATGGGAAATCACTGCTTTGTTCCATGGTGCTACTGCTCACTTTGCTACAACGACAACATCAAAATCATGGTCAATAGATGATGAGGCAAGGGCTTTGGAGCAGAGCAAATGGTGGAATATTGATTACTACAACATCTCACAGCGCTGCCAATGGCCTGGTTTTACATGCAATGGTGCTGGAAGCATTACTAAGATTTCAAGACCAGATGTGTCTGTTGGAGAACTATGGTTTACAGATATCGACCTAACAGTGTTCCCTAATTTGGTCCTTCTGGATCTTcatggaatgggaatgagtgGACAAATTTCTATCCAAAAAGAAGCTCTTCCAAATCTCACTCATCTACTTCTATCCGGTAATTATCTTTGTGGTGAGCTTCCTTCAAGTTTGGGTCATATGAAAAGTCTCAAGTATTTGGACCTATCCTTCAACTCGCTTACTGGTGATCTACCCACCTCTCTCGGAAACCTCACTCAACTTGTGGTGCTTGATGTTTCTAGCAATGTTATTAGTGGAGGCATTCCTCAACAATTCAGCAATATGAAGAAGCTTGTCTCCCTCAACATAAGTAGAAACAACCTCAATAAATCCATTCCTTCAAGTTTGGGTCATATGAAGAGTCTCAAGTATCTGGACCTATCCTTCAACTCACTTACTGCTGATCTACCTACCTCTCTCGGAAACCTCACTCAACTAGTGATGCTTGATGTGTCTAACAATATTATTGGAGGTGCCAGCAATTTGAAGAAAACTTCTTACGGGAACCTGAGGATAAACAACTTTCGTCGAACCATTCCATTAAACATGGGTCATATGATCAATCTCAAATATCTTGACCTATCCTCAAATTCTCTTACTGGTGAGTTACCTTGCTCTCTTGCAAATCTCACTCAACTTGTGTTTCTTGATATTTCTGTCAATAGTATTAGTGGAGGCATTCCTCAGCAATTTAGCAATCTCAAGAAACTTGAGAAGCTAAGTTTAAGTGGAAACAATCTCAACAGATCCATTTTCCTAAGTTTGGGTGGTGTGATCAGTCTCAAGTACCTAGACCTATCCTCAAATTCTCTTGCTGGTGAGTTACCTAGCACGTTTGCAAATCTCAAGAAACTTGAGTTGCTAAGGTTAAGTGGAAACAAACTCAATGGATCCATTCCTCCAAGTTTGGGTGGTATGATCAGTCTCAAGTACCTAGACCTATCCTCAAATTCTCTTTCTGGTGAGTTACCTAGCACGTTTGCAAATCTCAAGAAACTTGAGTCGCTAAGGTTAAGTGGAAACAAACTCAATGGATCCATTCCTCCAAGTTTGGGTGGTATGATCAGTCTCAAGTACCTAGACCTATCCTCAAATTCTCTTGCTGGTGAGTTACCTAGCACGTTTGCAAATCTCAAGAAACTTGAGTCGCTAAGGTTGAGTGGAAACAAATTCAGTGGATCCATTCCTCCAAGTTTGGGTCACATGACTAGTCTTGAGTCTCTTGATGTATCCTCAAATTCTCTTTCTGGTGAGTTGCCTAGCACGTTTGCAAATCTCACTCAACTTGTGTTTCTTGATGTCTCCCACAATTCCATTGGTGGTAAAATACCACCAGAAATCGTAGAGCTCAACCAACTTGAAATTCTAAACCTCTCCCTAAATAAGTTAAATGGACATATTCCTTCTGACATAGGTAAAATGTATGAGCTTCAAGTTGTTGATGTTAGTCACAACATGATTATCGGAGAGATCCCATCTCAATTAGGACATTTAGAATACCTTAATTGCTTGGATCTTAGCTATAACAATCTCGTTGGCATCATACCATCATCTTGCAACAAGCTGTACATTAATCACTTGAACTTGTCTTACAATTCATTAAGTGGATTTTCTTCAGAAGAATCATGTCGTTATTTAAATATAGATCAATTAATTGGTAATAAGGAGCTACTTGATCTATACGAAAATCATACTTGTTATCAGTTGTTTTACTCAGCTCCTACTCCTACCCCTCCAATAACAAGACCGAAGCACAAGAAGTACATGAAGATCCTTCTTCCTATCATAAGTTTCTTTATCATCCTTCGGATTATGGCCTTCCTCATTTCAAGATATGCGAATAGGAAGCCTCACATTGAGGAAAAGGTAGCCAAAAATGGAGACATGCACTGTATATGGAACTTTGATGGACAAATTGCGTATGAAGATATCATTAAAGCAACAGAGGACTTTGATATCAGGTACTGCATTGGGACAGGTGCTTATGGTAGTGTCTACCGTGCACAACTTCCCAGCGGAAAAATTGTTGCTCTGAAGAAACTCCACAAGCTGGAATCTGAAAACCCGAGTTTCGACAAGAGTTTTCGCAACGAGGCGAAGATGTTGACAGAAATCCGCCATCGGAACATTGTGAAGCTTTATGGTTTCTGTTTGCACAACAGAAACATGTTTCTTGTGTACGAATACATGGAAAGGGGAAGCCTATTTTATGCCTTGAGTCATGATGCTGAAGCTGAAGAATTAAGCTGGAGCAAGAGAGTGAACATCATCAAAGGAATAGCACAAGCTTTGTCTTACATGCATCATGATTGTGCCCTTCCAATTATTCACAGAGACATAACAACAACCAATGTTCTGTTGAACTCGGAGATAGAGGCTTCTGTTTCAGACTTTGGCACAGCTAGACTCCTTGATCCTGATTCCTCTAATCAAACTTTACTAGTTGGCACTTACGGATATGTTGCCCCAGAACTTGCATACACATTAGTGGTGACTGAAAAATGTGACGTGTATAGCTTCGGAGTAGTGGTATTAGAAGTAATGATGGGAAAGCATCCAGGAGATAAGAGACATTCAAGAAGTGGTTCTTGCAGTGACAATAGCATTATCATGCTTGAATCATATGCCGAAACATCGACCTTCAATGCAGCAAGTGGTTCAGCAACTTTCGGTTTCCAAGCGCTCTCTACTGTTTCCGTTTCATGA 2982 0.3994 MVVALLWEITALFHGATAHFATTTTSKSWSIDDEARALEQSKWWNIDYYNISQRCQWPGFTCNGAGSITKISRPDVSVGELWFTDIDLTVFPNLVLLDLHGMGMSGQISIQKEALPNLTHLLLSGNYLCGELPSSLGHMKSLKYLDLSFNSLTGDLPTSLGNLTQLVVLDVSSNVISGGIPQQFSNMKKLVSLNISRNNLNKSIPSSLGHMKSLKYLDLSFNSLTADLPTSLGNLTQLVMLDVSNNIIGGASNLKKTSYGNLRINNFRRTIPLNMGHMINLKYLDLSSNSLTGELPCSLANLTQLVFLDISVNSISGGIPQQFSNLKKLEKLSLSGNNLNRSIFLSLGGVISLKYLDLSSNSLAGELPSTFANLKKLELLRLSGNKLNGSIPPSLGGMISLKYLDLSSNSLSGELPSTFANLKKLESLRLSGNKLNGSIPPSLGGMISLKYLDLSSNSLAGELPSTFANLKKLESLRLSGNKFSGSIPPSLGHMTSLESLDVSSNSLSGELPSTFANLTQLVFLDVSHNSIGGKIPPEIVELNQLEILNLSLNKLNGHIPSDIGKMYELQVVDVSHNMIIGEIPSQLGHLEYLNCLDLSYNNLVGIIPSSCNKLYINHLNLSYNSLSGFSSEESCRYLNIDQLIGNKELLDLYENHTCYQLFYSAPTPTPPITRPKHKKYMKILLPIISFFIILRIMAFLISRYANRKPHIEEKVAKNGDMHCIWNFDGQIAYEDIIKATEDFDIRYCIGTGAYGSVYRAQLPSGKIVALKKLHKLESENPSFDKSFRNEAKMLTEIRHRNIVKLYGFCLHNRNMFLVYEYMERGSLFYALSHDAEAEELSWSKRVNIIKGIAQALSYMHHDCALPIIHRDITTTNVLLNSEIEASVSDFGTARLLDPDSSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGVVVLEVMMGKHPGDKRHSRSGSCSDNSIIMLESYAETSTFNAASGSATFGFQALSTVSVS 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0262 993 ProSitePatterns Tyrosine protein kinases specific active-site signature. 867 879 IPR008266 GO:0004672|GO:0006468
Sto9g0262 993 ProSitePatterns Protein kinases ATP-binding region signature. 749 771 IPR017441 GO:0005524
Sto9g0262 993 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 299 513 - -
Sto9g0262 993 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 253 417 - -
Sto9g0262 993 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 88 296 - -
Sto9g0262 993 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 419 958 - -
Sto9g0262 993 Gene3D Ribonuclease Inhibitor 25 180 IPR032675 -
Sto9g0262 993 SUPERFAMILY Protein kinase-like (PK-like) 725 949 IPR011009 -
Sto9g0262 993 SUPERFAMILY L domain-like 46 363 - -
Sto9g0262 993 PRINTS Leucine-rich repeat signature 281 294 - -
Sto9g0262 993 PRINTS Leucine-rich repeat signature 542 555 - -
Sto9g0262 993 Pfam Leucine Rich Repeat 352 374 IPR001611 GO:0005515
Sto9g0262 993 Pfam Leucine Rich Repeat 213 235 IPR001611 GO:0005515
Sto9g0262 993 Pfam Leucine Rich Repeat 280 302 IPR001611 GO:0005515
Sto9g0262 993 ProSiteProfiles Leucine-rich repeat profile. 280 303 IPR001611 GO:0005515
Sto9g0262 993 Gene3D Phosphorylase Kinase; domain 1 706 821 - -
Sto9g0262 993 SMART LRR_sd22_2 278 301 - -
Sto9g0262 993 SMART LRR_sd22_2 235 256 - -
Sto9g0262 993 SMART LRR_sd22_2 518 544 - -
Sto9g0262 993 SMART LRR_sd22_2 211 230 - -
Sto9g0262 993 SMART LRR_sd22_2 350 376 - -
Sto9g0262 993 SMART LRR_sd22_2 302 328 - -
Sto9g0262 993 SMART LRR_sd22_2 470 502 - -
Sto9g0262 993 SMART LRR_sd22_2 139 165 - -
Sto9g0262 993 SMART LRR_sd22_2 398 424 - -
Sto9g0262 993 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Sto9g0262 993 Pfam Leucine rich repeat 492 531 IPR001611 GO:0005515
Sto9g0262 993 Pfam Leucine rich repeat 444 483 IPR001611 GO:0005515
Sto9g0262 993 Pfam Leucine rich repeat 396 435 IPR001611 GO:0005515
Sto9g0262 993 SUPERFAMILY L domain-like 349 661 - -
Sto9g0262 993 Gene3D Ribonuclease Inhibitor 181 254 IPR032675 -
Sto9g0262 993 Pfam Protein kinase domain 748 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0262 993 Gene3D Ribonuclease Inhibitor 534 660 IPR032675 -
Sto9g0262 993 Gene3D Ribonuclease Inhibitor 439 533 IPR032675 -
Sto9g0262 993 Gene3D Ribonuclease Inhibitor 255 344 IPR032675 -
Sto9g0262 993 Gene3D Ribonuclease Inhibitor 345 438 IPR032675 -
Sto9g0262 993 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 419 958 - -
Sto9g0262 993 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 88 296 - -
Sto9g0262 993 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 253 417 - -
Sto9g0262 993 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 299 513 - -
Sto9g0262 993 ProSiteProfiles Protein kinase domain profile. 743 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0262 993 SMART LRR_typ_2 422 445 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 374 397 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 494 517 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 211 235 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 187 210 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 566 590 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 446 469 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 278 301 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 350 373 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 326 346 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 115 138 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 470 493 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 139 163 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 518 542 IPR003591 -
Sto9g0262 993 SMART LRR_typ_2 398 421 IPR003591 -
Sto9g0262 993 Gene3D Transferase(Phosphotransferase) domain 1 822 973 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0262 Sto-Chr9 2452304 2455474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0262 41 915 Receptor kinase-like Gene Family AT4G08850 38.158 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto9g0262 Pkinase 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0262 - - gmx:102667972 797.734