LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto9g0261	ATGGAGAGGGCACCACAATGGATTATATCCTTAAGCTTATGGGTAGCCTTCATCCAACTTTTCCTTCCTCTTGGCATCACAATGCTTGATTCAAGGAATATATTCACCACCATTGATAAAAATCCTGGTTTCATAAGCATTGACTGTGGAGCAAAGAGTGATTACTCAGACCCCCAAACTGGTATTTGGTATGAAACGGactcaaattttgtagaaacAGGAACCAACTTTAAGGTTCATCCAAGCATCAATCTAAATTACCCTTCTTTTGGAGGACTATTGAACACTCTTAGAAGCTTCCCAGAAGGAAAAAGGAACTGCTATACTCTGAAACCAAAACAGGGGAAGCACAACAACAATTATCTCATCAGAGCTATTTTTGCATATGGAAACTACGATGCCAAAAATCAAACCCCAATCTTCGACTTGTATCTTGGGGTCAATCGTTGGGCTACTATTAGTGTTGATGATGTGAAGGATTATTACATTGCTGAGATTATCCATAGTACCTCCACAGCTCACACCATACATGTCTGCCTTGTCAATATTCTCTCTGGAACACCCTTCATTTCTGCATTGGAATTACGGCCTTTGAGCAATTCTATTTATCAAACCCCATGGCCTTCTTCTCAATCACTATTGATCTTACAAGGAAGAATTGATGTTGCCTCCACTGGTTTAGACTCCCATACCAGGTACAAGGATGACATTTATGATCGTTTGTGGTACAACGAAAAGTATATGAAAGATTGGGAAGCATTGAACAGAAACGTAGATATTGTTGCTGATGAGAGTACTTATGAGTTACCACAACAAGTGCTGAGATCTGCAGCCAAATCATTGAATCTCTCATCTTCTTTACACTTTGACTATAACTCTATTTGGAGAGACCTTGAAGAGTCTTCTTTGTATTATGTGTATTTCCACTTTGCTGAGATTGAGCAGCTTCCTTATGGCCACAAAAGAATAATTAACATTTCTTTATATAGTAATGAAAGCATCCTCTCTATACCTGTAAATCTTAAATACTTAGAGCCAATCACCATTAGTCCTCAATATTCAACCCAAAGTTTTGTTCAATTTAGGATTAGTGCAGCATCAGAATCCTCTGCTCCTCCCATTCTAAATGCCTTTGAGGTTTACAAATTGGTAACTTCACTCTCTCCTCAAACAGACATAAGAGatgATTGGCAAGGAGATCCATGTCTTCCAAAGGACTATGCTTGGGACAGAGTAAGCTGCGGCTCTAACACAAATGACAACATAAGAATCACCTCATTGGACTTGTCATTTAATGACTTGTCAGGAGCTATACCAGAATTTTTAGCTGAATTGCCAAAATTGAAAGTCCTTAATTTGGCTGGAAACAAACTTACAGGTTCAATTCTCAGAGCTCTTAAGGAAAAGTCATATTTAACTTTGCAATTGAGATTGGACAATAATCCAGGTCTCTGTGAGACAAGCTCATGCGGAAGCACATCACACAAGTCTATACCTCTTATTGCATCAATAGTATCATTAGTAGTATTTGTTGTAATAATAGGTTGCGTTTCTATGAAGCTCTGGAGACAAAGAAGCAAAAAGCAAAGAGGGATGCCTACTACATCTAACAAGGACAAGCAGGGGATAGCAAAAAACCAAACATTTTCTTATTCTAAGATTCTTGGTATTACTAAGAACTTACAAAGTGTAATTGGAAAAGGAGGATTTGGAAATGTGTACCTTGGTACACTACAAGATGGTGCACAAGTTGCAGTGAAGATACTTTCAGAGACATCACGTCAAGGGTATAAAGAATTTCAATCTGAGGCAAAACTGTTGAAGTTTGTTCATCACAAGAACTTGGTTTCCCTTATCGGATATTGTGATGAAGTTGACATGAAAGCACTGGTTTATGAATATATGGCTAATGGAAATCTCCAGCACCAATTGTCAGGATTGGACTATTTGCATAATGGGTGTAAGCCACCAATAGTTCATAGAGATCTTAAACCTTCAAACATCTTATTAAATGAGAACATTCAAGCCAAAATTGCTGACTTTGGATTGTCTAGAGCTTTTGCCAATGACAATGACACTCATCTTTCTACTACTCTAGCGGGCACATATGCAGTAACAGAAGCTTGTGGAAAAGTTAATCACATACTTCAATGGGTTGTTCCTCTTATTGAAAAGGGAGATATTCCAAACATCATGGATCCAAGGTTTGAAGGAAACTTCAATACAACCTCTGCACAGAAAGCTATAGAGGTTGCCATGTCATGCATTTCAAAGGATGTTGTGTTGAGGCCAGACATCAGTCACATAATGGCAGAGCTTAAGGAATGTTTGAATCTGGAAATTATTATGATTCATGGAAGCAGCTCTTCTGTATTTGAATCAGACATCACAGAAATTCTTCCAAGGTAG	2409	0.379	MERAPQWIISLSLWVAFIQLFLPLGITMLDSRNIFTTIDKNPGFISIDCGAKSDYSDPQTGIWYETDSNFVETGTNFKVHPSINLNYPSFGGLLNTLRSFPEGKRNCYTLKPKQGKHNNNYLIRAIFAYGNYDAKNQTPIFDLYLGVNRWATISVDDVKDYYIAEIIHSTSTAHTIHVCLVNILSGTPFISALELRPLSNSIYQTPWPSSQSLLILQGRIDVASTGLDSHTRYKDDIYDRLWYNEKYMKDWEALNRNVDIVADESTYELPQQVLRSAAKSLNLSSSLHFDYNSIWRDLEESSLYYVYFHFAEIEQLPYGHKRIINISLYSNESILSIPVNLKYLEPITISPQYSTQSFVQFRISAASESSAPPILNAFEVYKLVTSLSPQTDIRDDWQGDPCLPKDYAWDRVSCGSNTNDNIRITSLDLSFNDLSGAIPEFLAELPKLKVLNLAGNKLTGSILRALKEKSYLTLQLRLDNNPGLCETSSCGSTSHKSIPLIASIVSLVVFVVIIGCVSMKLWRQRSKKQRGMPTTSNKDKQGIAKNQTFSYSKILGITKNLQSVIGKGGFGNVYLGTLQDGAQVAVKILSETSRQGYKEFQSEAKLLKFVHHKNLVSLIGYCDEVDMKALVYEYMANGNLQHQLSGLDYLHNGCKPPIVHRDLKPSNILLNENIQAKIADFGLSRAFANDNDTHLSTTLAGTYAVTEACGKVNHILQWVVPLIEKGDIPNIMDPRFEGNFNTTSAQKAIEVAMSCISKDVVLRPDISHIMAELKECLNLEIIMIHGSSSSVFESDITEILPR	802

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto9g0261	802	Gene3D	Ribonuclease Inhibitor	379	492	IPR032675	-
	Sto9g0261	802	Pfam	Protein tyrosine and serine/threonine kinase	645	695	IPR001245	GO:0004672\|GO:0006468
	Sto9g0261	802	Pfam	Protein tyrosine and serine/threonine kinase	561	644	IPR001245	GO:0004672\|GO:0006468
	Sto9g0261	802	SMART	serkin_6	559	777	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto9g0261	802	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	658	670	IPR008271	GO:0004672\|GO:0006468
	Sto9g0261	802	Pfam	Malectin-like domain	47	382	IPR024788	-
	Sto9g0261	802	PANTHER	RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED	38	702	-	-
	Sto9g0261	802	PANTHER	RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED	712	782	-	-
	Sto9g0261	802	PANTHER	OS07G0107800 PROTEIN-RELATED	38	702	-	-
	Sto9g0261	802	PANTHER	OS07G0107800 PROTEIN-RELATED	712	782	-	-
	Sto9g0261	802	SUPERFAMILY	Protein kinase-like (PK-like)	546	773	IPR011009	-
	Sto9g0261	802	Gene3D	Transferase(Phosphotransferase) domain 1	707	784	-	-
	Sto9g0261	802	Gene3D	Transferase(Phosphotransferase) domain 1	636	706	-	-
	Sto9g0261	802	Gene3D	Phosphorylase Kinase; domain 1	565	635	-	-
	Sto9g0261	802	SUPERFAMILY	L domain-like	423	489	-	-
	Sto9g0261	802	ProSiteProfiles	Protein kinase domain profile.	559	802	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto9g0261	802	Pfam	Leucine Rich repeat	446	466	IPR001611	GO:0005515
	Sto9g0261	802	Pfam	Leucine Rich repeat	421	436	IPR001611	GO:0005515
	Sto9g0261	802	ProSitePatterns	Protein kinases ATP-binding region signature.	565	587	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto9g0261	Sto-Chr9	2437364	2445492	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto9g0261	8	797	Receptor kinase-like Gene Family	AT2G19210	36.674	1.02e-167	506

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CR4L	Sto9g0261		Malectin_like	1.2e-83	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto9g0261	-		-	mtr:MTR_8g015040	704.516