Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0258 ATGGATAGGCAGGCGAAAGCAAAAAATCAAACATTTTCTCACTCTGAGATTCTTGGTATTACTAAGAACTTAGAAACTGTAATTGGAAGTGGAGGATTTGGAAATGTATACCTTGGTACACTACAAGATGATGCACAAGTTGCAGTGAAAATACTTTCTGAGACATCACGACAAGGGTTTAAGGAATTTCAATCCGAGGCAAAACTGTTGAAGTTGGTTCATCATAGAAACCTAGTTTCCCTTATTGGGTACTGTGATGAATCTGACATGAAAGCACTGGTTTATGAATATATGGCTAAGGGCAATCTCCAGCACCAATTGTCAGATAGGAACCCTAATGCTTTGAAGTGGAATGAGAGACTTCGGATTGCATTTGATGCAGCATGTGGATTGGATTATTTGCATAATGGTTGTAAACCATCAATAGTTCACAGAGACCTTAAACCGTCGAACATCTTAATAAATGAAAACATGCAAGCCAAAATTGCCGATTTTGGATTGTCTAGAGCTTTTGCCAATGACAGTGACACTCATCTTCTAACCTCCCCGGCTGGCACATATGGTTACTTGGATCCTCAacTTCATATATCAAAGAAGAGTGACATCTATAGCTTTGGAATAATTCTGTTTGAGCTTATTACTGGTAAGCCAGCAGTAACACAAGCTTCTGGAAAAGTAAGTCACATACTTGAATGGGTTGTTCCTCTTATTGAAAAGGGAGATATTTCAAACATCATGGATCCAAGGTTTGAAGGAAACTTCAATACAACCTCTGCTCAGAAAGTTACAGAGGTTGCCATGTCATGCATTTCAAAGGATCTTGTGTTGAGGCCAGACATCAGTCACATAGTGGCAGAGCTTAAGGAATGTTTGAATCTGGAAATTATTATGATTCATGGAAGCAGCTCTTCTGTGTTTGAATCATACATCACAGAAATTCATGCAAGGTAA 951 0.3859 MDRQAKAKNQTFSHSEILGITKNLETVIGSGGFGNVYLGTLQDDAQVAVKILSETSRQGFKEFQSEAKLLKLVHHRNLVSLIGYCDESDMKALVYEYMAKGNLQHQLSDRNPNALKWNERLRIAFDAACGLDYLHNGCKPSIVHRDLKPSNILINENMQAKIADFGLSRAFANDSDTHLLTSPAGTYGYLDPQLHISKKSDIYSFGIILFELITGKPAVTQASGKVSHILEWVVPLIEKGDISNIMDPRFEGNFNTTSAQKVTEVAMSCISKDLVLRPDISHIVAELKECLNLEIIMIHGSSSSVFESYITEIHAR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0258 316 PIRSF TyrPK_CSF1-R 88 216 - -
Sto9g0258 316 PIRSF TyrPK_CSF1-R 21 110 - -
Sto9g0258 316 PIRSF TyrPK_CSF1-R 256 299 - -
Sto9g0258 316 Pfam Protein tyrosine and serine/threonine kinase 24 287 IPR001245 GO:0004672|GO:0006468
Sto9g0258 316 ProSitePatterns Protein kinases ATP-binding region signature. 28 50 IPR017441 GO:0005524
Sto9g0258 316 SMART serkin_6 22 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0258 316 ProSiteProfiles Protein kinase domain profile. 22 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0258 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Sto9g0258 316 Gene3D Transferase(Phosphotransferase) domain 1 99 301 - -
Sto9g0258 316 PANTHER OS07G0107800 PROTEIN-RELATED 4 301 - -
Sto9g0258 316 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 4 301 - -
Sto9g0258 316 Gene3D Phosphorylase Kinase; domain 1 28 98 - -
Sto9g0258 316 SUPERFAMILY Protein kinase-like (PK-like) 12 287 IPR011009 -
Sto9g0258 316 CDD STKc_IRAK 28 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0258 Sto-Chr9 2413201 2415213 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0258 7 312 Receptor kinase-like Gene Family AT1G51890 49.839 3.36e-108 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto9g0258 PK_Tyr_Ser-Thr 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0258 - - jre:109007819 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0258 9 2413201 2415213 Sto9g0258 9 2413201 2415213 ECH