Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0253 ATGCATGATGCAGATTTCATAAGCATTGATTGTGGGGCAAAGGAAAATTACATGGACGAGACAAGTGGGATTTGGTACGACACAGATGAAAACTACATACAAACTGGAACCAATTATGTAACATCTCCTGATTTCCTATTCCAGCGTAATCCAACCATAGATGCCCAAATTTCAACACTAAGAAGCTTTCCAGAAGGACAAAGAAACTGTTACACACTCAAACCCAAGCAGCCAACAGAGAATAACAACAAAAACAtcaataaatatttgataaggGCAGTGTTTGCATATGGGAATTATGACAACAAAAACCAAGTCCCAATTTTTGACATATACTTGGGTGTCAACTATTGGGCAACAATGCGAGTGGGTAATGCATCTTATATCCAATACCATGACATAATAATCTCCCACCTTCCCATTGAAGAAGACGACAATGATAGTAATATGGTACAAGTGTGTCTTGTGAACACTGGACAAGGCACACCTTTCATCAACACTTTGGAATTAAGGCCAATGTTCAGCAATAACTCCATCTATTCCTATGTTTCTAATTCTAGTACTTCACTACCTTTATATGTTAATGGCAGAGCTGATGTCGGCACTCAGCTTCCCCCAACTTTAGTCAGGTATAAGGACGATGTATACGATCGCTTGTGGAACTTTTATAACTATAGCAATTGGTATCCCTTAAATACAAGTGCAGAAATAAGTACAGGGGACTCTGCCTATAAGGTGCCACCTCAAGTATTACAAACTGCTGTACAATCATTGAATCGTTCCTACTCCATATCTGTGAACTGGACTTATGGAACAACTTACCAATACCTTGTGTTCCTTCACTTTGCTGAAATTGAAAAGCTTCCTTCCGCCCACAAGAGAATCATCAATGTCACTATTGGTGATAATGACTCCTTCGTTCAGCCTCTTGACTATTTGAAACCAATCACCCTAAGTTCCAACATCCCAAATAAAGGTTATGCAACTTTCACAATCAGTGCAGCTGCTGAATCTGATGCTCCTCCTATCCTCAATGCTTTTGAAATTGCCCATTTGGTCCCTCAACCAAATTCCCCTACACATGCACAAGACATAAATGCCATGATGGAAATCAAAGGTACTTATGACGTGTCCAGAATCAGCTGGCAAGGTGATCCCTGCGTTCCAACTAATCTTGCATGGGATGGTTTGAATTGTAGTTCTGATAAGAATCCAAGGATCATTTCATTGAACTTGAGCTCGAGCAAATTGACAGGACAAATAACTACCTCATTTGCCAATCTGAAAAATTTGGAGTTATTGGATTTGTCAAATAATGAATTGACGGGACAACTCCCAGAATTTCTTGCAAATCTTCCTAATTTGAAATTACTTAATTTGACAGGAAATAAGCTCACAGGTATAATTCCGAAGGGTTTGAGAGAAAAGGCTAATTTGCAGCTGAGTGTGGCAAACAATCCAGGTCTTTGTCAGACAGATTCATGCAAAAAACACAAGTTTGTAATTCCACTTACTGCATCAATTGCAGTTTTAGTCATAATTGTCATGGTTTCTTTGATCATTTGGAGACTCAGAAAGAAAAGATTAGATCAATCACAGAAGACAAGATTTCTGAAACAAAAGAATCAAGCCTTTTCTTACTCTCAGATTCTTCGTATCACCAACAATTTTGAAACTACTATTGGCGAAGGAGGATTCGGAAAAGTTTATCTTGGTACTTTAGAAGATGGTACTCAGGTTGCAGTAAAAATACTTTCTTCATCATCAAGACAAGGATATAAGGAATTTCAGTCAGAgGCTCAACTCTTAACTATTATTCATCATAAAAACTTGGTTTCTCTAATTGGTTATTGTAATGAAGACAACGTCAAAGCATTAATCTATGAATATATGGATAATGGAGACCTTAGCCAACTATTATCAGAGAAAAATCCAAATGTTCTGAAGTGGAATGAGAGACTTCAAGTTGCAGTGGATGCAGCAAAAGGACTAGAGTATCTTCATAATGGCTGTAAAACACCAATAATCCATAGGGACTTAAAGCCATCAAACAtcttattaaataaatcaatGCTGGCTAAGATTGCTGATTTTGGGTTATCTAAAGCATTTCAAAATGACATAGATTCTCATCTATCAACTCAACCAGCTGGTACACCTGGTTATATTGATCCTGAATTCCAAAGATCTGGAATCTTGAATAAGAAAAGTGATATTTATAGCTTTGGGATAATTCTGCTTCAGCTAATCACTGGTCATCCTCCCATAAGAAGATTTGAGAAAATCAGTTTCATTGTTGATTGGGTTGGTCCTAAAATAGAATGTGGGGATATTGAAGGCATTGTTGATTCAAGGTTAGATGCAGAATTTGGTGTTATTTCTGCATGGAAAGCTATTGAGATTGCAATGTCATGCACTGCATCAGAACCAACCCAAAGGCCAGACATAAGTTTCATATTGCAAGAATTGAAGGAATGTTTGGCTTTGGAAATGGATAATGTGAAAACATACAAGAAAGCATCAAGCAGTTCACTCAGTTATATAGGTCACGCTGAATCAATTACCATTCCCTCAGCTAGAAATCTCAACTTTGGCAAATCAGCAAGAGATTCTGGTAGTGGTCCTGACAGGTCATTAAATGACAAATCCCTACAACAAATTGAGAAAGAGATAAGAGTGGGACCCAAGTCAACTTGTGTTAGAAAGGAAGAACGAAAAAATACTTACACAGAGGTGATCCTTGTGGTGTTGGAGCCATTGATGCTAGAACCGCAGTTTAATCCATCCCATGCAGTTTCCATTGGAAGGCATGGGTCACCTTGCCAATCTAATTTGGAGATCTTGTATGTGTTTTTGATGTCCACGATGGCATCCACTAGCCAAGCTGCTCAATTTCAGCAAAGTGAAAGTAGACGTAATATTTCAAAGACTTTTCAAGGATCAATATCTACAGATGTATTGAACAGCTGCCATTCTTGTACATCATTATCGTTGTACCACAGACGATCGTAG 3012 0.3775 MHDADFISIDCGAKENYMDETSGIWYDTDENYIQTGTNYVTSPDFLFQRNPTIDAQISTLRSFPEGQRNCYTLKPKQPTENNNKNINKYLIRAVFAYGNYDNKNQVPIFDIYLGVNYWATMRVGNASYIQYHDIIISHLPIEEDDNDSNMVQVCLVNTGQGTPFINTLELRPMFSNNSIYSYVSNSSTSLPLYVNGRADVGTQLPPTLVRYKDDVYDRLWNFYNYSNWYPLNTSAEISTGDSAYKVPPQVLQTAVQSLNRSYSISVNWTYGTTYQYLVFLHFAEIEKLPSAHKRIINVTIGDNDSFVQPLDYLKPITLSSNIPNKGYATFTISAAAESDAPPILNAFEIAHLVPQPNSPTHAQDINAMMEIKGTYDVSRISWQGDPCVPTNLAWDGLNCSSDKNPRIISLNLSSSKLTGQITTSFANLKNLELLDLSNNELTGQLPEFLANLPNLKLLNLTGNKLTGIIPKGLREKANLQLSVANNPGLCQTDSCKKHKFVIPLTASIAVLVIIVMVSLIIWRLRKKRLDQSQKTRFLKQKNQAFSYSQILRITNNFETTIGEGGFGKVYLGTLEDGTQVAVKILSSSSRQGYKEFQSEAQLLTIIHHKNLVSLIGYCNEDNVKALIYEYMDNGDLSQLLSEKNPNVLKWNERLQVAVDAAKGLEYLHNGCKTPIIHRDLKPSNILLNKSMLAKIADFGLSKAFQNDIDSHLSTQPAGTPGYIDPEFQRSGILNKKSDIYSFGIILLQLITGHPPIRRFEKISFIVDWVGPKIECGDIEGIVDSRLDAEFGVISAWKAIEIAMSCTASEPTQRPDISFILQELKECLALEMDNVKTYKKASSSSLSYIGHAESITIPSARNLNFGKSARDSGSGPDRSLNDKSLQQIEKEIRVGPKSTCVRKEERKNTYTEVILVVLEPLMLEPQFNPSHAVSIGRHGSPCQSNLEILYVFLMSTMASTSQAAQFQQSESRRNISKTFQGSISTDVLNSCHSCTSLSLYHRRS 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0253 1003 Gene3D Phosphorylase Kinase; domain 1 518 630 - -
Sto9g0253 1003 Gene3D Transferase(Phosphotransferase) domain 1 631 847 - -
Sto9g0253 1003 Gene3D Ribonuclease Inhibitor 365 491 IPR032675 -
Sto9g0253 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 675 687 IPR008271 GO:0004672|GO:0006468
Sto9g0253 1003 SMART serkin_6 555 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0253 1003 Pfam Malectin-like domain 9 349 IPR024788 -
Sto9g0253 1003 Pfam Leucine rich repeat 409 465 IPR001611 GO:0005515
Sto9g0253 1003 PANTHER OS07G0107800 PROTEIN-RELATED 4 842 - -
Sto9g0253 1003 PRINTS Leucine-rich repeat signature 431 444 - -
Sto9g0253 1003 PRINTS Leucine-rich repeat signature 452 465 - -
Sto9g0253 1003 ProSiteProfiles Leucine-rich repeat profile. 430 453 IPR001611 GO:0005515
Sto9g0253 1003 SUPERFAMILY L domain-like 388 480 - -
Sto9g0253 1003 ProSiteProfiles Protein kinase domain profile. 555 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0253 1003 Pfam Protein tyrosine and serine/threonine kinase 557 823 IPR001245 GO:0004672|GO:0006468
Sto9g0253 1003 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 4 842 - -
Sto9g0253 1003 ProSitePatterns Protein kinases ATP-binding region signature. 561 583 IPR017441 GO:0005524
Sto9g0253 1003 SUPERFAMILY Protein kinase-like (PK-like) 538 823 IPR011009 -
Sto9g0253 1003 Gene3D - 200 351 - -
Sto9g0253 1003 CDD STKc_IRAK 561 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0253 Sto-Chr9 2371190 2379209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0253 6 828 Receptor kinase-like Gene Family AT2G19230 44.746 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto9g0253 Malectin_like 8.6e-75 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0253 - - mtr:MTR_8g015040 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0253 9 2371190 2379209 Sto9g0253 9 2371190 2379209 ECH