Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0252 ATGAGTGCACCAAAATGGATGGTGCAGCTTTTACTTGTTATCTTCATTGCTCTTCTCAGCTCAAGCTTGGTGGCTTCACACACCATTCATAATGAATCTCCTCATAGGAAGCTTGCTTCTCCTGCTGATTCAGGTTACATCAGCATAGATTGTGGAATAAACGAAGCATACACAGACAATGAGAGCAACATCTGGTACCAACCAGACTCAAACTTCATAGAAACTGGCCAAAACCACATATTACCCTCACAATACACCTTCGACCAACACCATATCTCAAAGCAACTCAATACACTCAGAAGCTTCCCAGATGGAGACAGGAATTGCTACACTCTCATCACACCCAAACAGGGCAGAAGCAACAAGTATCTAATCAGAGCCTTCTTTGCTTACAGAAACTATGACTTGAAGAATACAACTCCAGCTTTTGATGTGTATCTCGGTGTTAATCACTGGAAGACCATTGAGTTCGAGGATGTCTTGTCGTATTTCCTCATTGATGTCGTTTATGTTGCTGTCACGGACACCATAAGTGTGTGTCTTGTCAATATTGGAAAAGGGGTTCCTTTCATTTCGTCGTTGGAGTTATGGTTTCTCTCTGATTCTACCTATTCAATCTCTAGTTTGCTTCCGCAGGATGTCATGACACGTTCTAATCTTGGCATGTCTCAAGACACCGTCTTTATCAGGTACAAGGATGATACATATGGTCGCTTGTGGTTTAATAGATTCATAGGAAACTCAAAGACAATCAACACATCATCAGCTATTGATGCCAATGGAATACAAAATACCTACAAACTgccatcacaagtattgaagaCTGCAATACAATCTCTGAGTCTGAACTCTTCTTTAGAAATCtactttgacaaaaatactgaTAAATCCTATGAGTACTACGTTTACCTTTACTTCTTTGAATTTGAGGAGCAAGCACGAACCCAGAAAAGGATCATGGATATTACTTTCAATGATGTGACCATCCTCACTCAGCTCTTCACTCCTCAATATATGAAGGTGGTCACAATTGTGAGGAATATCACAAAAGTAGATCAACTTCGTATTTTGATCAAATCCACCCCTGAATCTGATTTACCAGCTATGATCAATGCTTTTGAGGTTTATAGAGTACTACACCAACCTAATTCACCAACTTACCAAGAAGATGTTGATGCTATCTGGAGCATAAAACGTGTCTATGAGATCCCTAGAATAAATTGGCAAGGAGACCCATGCATTCCAACTAATTTTACTTGGGAAGGTCTCACTTGCAGCTCTGATAGCAACCCAAGAATCATTTCACTGAACTTAAGTGCAAGGAGATTAACAGGGGAGATAGATGCTTCATTTTCCGGGCTGACTAAACTAGAGTCCTTGGACTTATCAAACAACAAATTGACAGGAAAAATTCCTGAATTTTTTTCAGAGTTACCAAGTTTGAAATTCCTTAATTTGTCAGGGAATCAGCTCACAGGTTCAATCCCCAAATCACTGAAGCAAAAGTTAAATACCACTTTGTTGTTGAGTTTGGAAGGGAATCCAGGTCTCTGCCTGACAGGATCATGTGAAAAAAAGAAGTCACTTGTCCCAATTATTGCTTCTATAGCAGCATCTATAGTAGTTTTGGTAACCATTGTCGTCATTTATGTGATGGTCCGGAGAATCAAAAGGAAGAAACAAGGAgTTTCTAAGAAAGATGGACAGAAGAAATCGAAGAATCAAGTATTTTCTTACAGTCAGGTAACAAGAATTACCAGTAACTTCAAAACTGTAATTGGAAAAGGAGGATTTGGAGAAGTTTACCTTGGCACTCTAAGAGATGGTAGAGAAGTTGCTGTCAAGTTACTTTCTCAGACATCAAATCAAGGATATAAGGAATTCCATTCAGAGGCAGATTTATTGACAATTGTTCACCATAGAAACTTGGTGTCTCTTGTCGGGTACTGTGATGAAGGTGATGTTAAAGCATTGATTTATGAATATATGACTAAGGGGAATCTCCAACAGCTATTGTCAGATAAGAGCCCCAACGTTTTGAAATGGTCTGAGAGGCTTCAAATTGCAGTGGATGCAGCACATGGACTGGACTATCTGCATAATGGATGTAAGCCTCCCATAGTCCACAGAGACTTGAAGACTGCTAATATTTTGCTGAATGGAAACATGCAAGCCAAGATTAGTGACTTTGGACTATCAAGAGCTTTTGCAAATGAAAATGACACTCATGTATCAACTGTTCCTGCTGGCACACTAGGTTACCTTGATCCTGAGTTTTATAGCTCTGGAAACCTGAACAAAAAGAGTGATGTTTATAGCTTTGGGATAATTCTGCTTGAGTTAATCACAGGGCAGCCTGCAATTAAAGCAGCATCACCTGGAAGTGTCACTCACATTCTTCAATGGGTTAATCCTAAACTTGGGAATGGAGATATCAAATCCATAGTTGATCCAAGATTAAAAGCACAATATAACACAAGTTCTGCATGGAAGCTTCTAGAGATTGCCATGTCCTGCATTCCTCCTACTGCAATCCAAAGGCCTGACATGAGCCGTGTAGTGAATGAACTAAAGGACTGTTTGGCTCTGGAAATCTCCATTGAAAGAACAGAGAGCAGCAGGAGAAAATCCAGCAATTCATTGGACATGAGTTCTTTGAATTCTTTCCAGATTGAATCAGTAATAAGAGGACCATATGCTAGATAG 2706 0.3914 MSAPKWMVQLLLVIFIALLSSSLVASHTIHNESPHRKLASPADSGYISIDCGINEAYTDNESNIWYQPDSNFIETGQNHILPSQYTFDQHHISKQLNTLRSFPDGDRNCYTLITPKQGRSNKYLIRAFFAYRNYDLKNTTPAFDVYLGVNHWKTIEFEDVLSYFLIDVVYVAVTDTISVCLVNIGKGVPFISSLELWFLSDSTYSISSLLPQDVMTRSNLGMSQDTVFIRYKDDTYGRLWFNRFIGNSKTINTSSAIDANGIQNTYKLPSQVLKTAIQSLSLNSSLEIYFDKNTDKSYEYYVYLYFFEFEEQARTQKRIMDITFNDVTILTQLFTPQYMKVVTIVRNITKVDQLRILIKSTPESDLPAMINAFEVYRVLHQPNSPTYQEDVDAIWSIKRVYEIPRINWQGDPCIPTNFTWEGLTCSSDSNPRIISLNLSARRLTGEIDASFSGLTKLESLDLSNNKLTGKIPEFFSELPSLKFLNLSGNQLTGSIPKSLKQKLNTTLLLSLEGNPGLCLTGSCEKKKSLVPIIASIAASIVVLVTIVVIYVMVRRIKRKKQGVSKKDGQKKSKNQVFSYSQVTRITSNFKTVIGKGGFGEVYLGTLRDGREVAVKLLSQTSNQGYKEFHSEADLLTIVHHRNLVSLVGYCDEGDVKALIYEYMTKGNLQQLLSDKSPNVLKWSERLQIAVDAAHGLDYLHNGCKPPIVHRDLKTANILLNGNMQAKISDFGLSRAFANENDTHVSTVPAGTLGYLDPEFYSSGNLNKKSDVYSFGIILLELITGQPAIKAASPGSVTHILQWVNPKLGNGDIKSIVDPRLKAQYNTSSAWKLLEIAMSCIPPTAIQRPDMSRVVNELKDCLALEISIERTESSRRKSSNSLDMSSLNSFQIESVIRGPYAR 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0252 901 ProSitePatterns Protein kinases ATP-binding region signature. 593 615 IPR017441 GO:0005524
Sto9g0252 901 SMART serkin_6 587 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0252 901 Pfam Leucine rich repeat 435 491 IPR001611 GO:0005515
Sto9g0252 901 ProSiteProfiles Leucine-rich repeat profile. 480 502 IPR001611 GO:0005515
Sto9g0252 901 CDD STKc_IRAK 593 858 - -
Sto9g0252 901 SUPERFAMILY L domain-like 386 504 - -
Sto9g0252 901 ProSitePatterns Serine/Threonine protein kinases active-site signature. 707 719 IPR008271 GO:0004672|GO:0006468
Sto9g0252 901 PRINTS Leucine-rich repeat signature 457 470 - -
Sto9g0252 901 PRINTS Leucine-rich repeat signature 478 491 - -
Sto9g0252 901 Gene3D Transferase(Phosphotransferase) domain 1 663 882 - -
Sto9g0252 901 Pfam Protein tyrosine and serine/threonine kinase 589 857 IPR001245 GO:0004672|GO:0006468
Sto9g0252 901 ProSiteProfiles Protein kinase domain profile. 587 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0252 901 PANTHER OS07G0107800 PROTEIN-RELATED 40 880 - -
Sto9g0252 901 Gene3D Phosphorylase Kinase; domain 1 568 662 - -
Sto9g0252 901 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 40 880 - -
Sto9g0252 901 ProSiteProfiles Leucine-rich repeat profile. 456 478 IPR001611 GO:0005515
Sto9g0252 901 SUPERFAMILY Protein kinase-like (PK-like) 573 857 IPR011009 -
Sto9g0252 901 Pfam Malectin-like domain 49 378 IPR024788 -
Sto9g0252 901 Gene3D Ribonuclease Inhibitor 395 511 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0252 Sto-Chr9 2354764 2363645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0252 44 889 Receptor kinase-like Gene Family AT2G19210 42.111 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto9g0252 Malectin_like 1.3e-79 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0252 - - vun:114194066 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0252 9 2354764 2363645 Sto9g0252 9 2354764 2363645 ECH