Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0251 CTGGCTCTCAAGTTGAGGTACTGTGCACTTCCTCTTAACGTTATTGCctttaaaatgaagaagagggAATTAGCAGAATGGATTATGGTTTTAGATGTCTTTGTTTCCTCCTCTATCCTTCTTCTAATTACCAACTTGGGACAAGTAGTTGCAGACACTACTAATTCTTCAGGTGTGATAAGCATCGATTGTGGGGTAATCTACGACAACTGGGACGAGAATAGTTTTTTTCATGAGGGCGATGATGCGAGATTTGTAGAATCTGGCAAAACAGCTCGAGTAGCCTCTGCCTTTGAGAGTGAGGATCATCAGATTGGGAAGCAGCTCAATACATTGAGATTCTTTCCCGAAGGAAGAAGAAACTGCTATACCCTAGAACCCAAATTGGGCGAGAACAACAACTATCTCATCAGGGCTTACTACGCATATGGAAACTATGACTACACTAATTCAACTCCAACCTTTGATTTCCATCTCGGCGTCAATTTTTGGTCAACAACTTCGCTGGATGATCCCAGGTACTATCGACGAGTCGATGTCATTCATGTTTCCCCAACGAAGAAAATGGATGTGTGCCTTATGAATACTGGCAAAGGGACACCCTTGATTTCCTTGTTGGAATTGTGGCCTTTGCAGAATTCTGTATATCGGCCCATCTCTAATTCACTCCCACTGGACCTCATGGTACGCTCTTCGCTGGGTATCAAGGATGACAATATTGGTTTTATAAGATACTCGAGTGATATCTACGGGAGGTCCTGGTTTAATGGAAACATCGAGATCCAGAATGCAGCGCGAATCAGCGCACCAGCAGCCATTGACGGTGATGAAGGAGTCTACAAACTACCAAAAGAAGTGTTGAGCACTGCAGTTCAGTCACTCGATGTTAACTCTTCCTTAGTTATTAACTTGAACGACATGGATATCCTTTATGAGTATTACGTGTACCTTCATTTTTATGACTTCACCGAGGAGTCTAAGAGTCAGCAGAGGAAGATGGATATTACTTTCACTGATACCATCACTGCTAGCCTAACTCTGGAATACCAGAAACCCATTACCCTATTTCAGAATATTAAGCAAGGCAACTATTTTGATAATATTTCCATTGCATCCGCCCCTGGTTCTGGTTTACCTGCCATGATCAATGCTTATGAGTTGCTACTGGAAATAACAACAGTTGATGCTATGCGGAACATCAAACATGGTTATAAAATCACGAGAATCAGTTGGCAAGGAGATCCATGCATGCCAAAAGAATGTATATGGGAAGGCCTGACTTGCAATTACTCTGACAGCATTCCAAGGGTCATTTCATTGAACTTGAGCTCAAGCACATTGATGGGAGAGATATATGATTCATTCTCTAATCTCATAAACTTGGAGTCCTTGGATTTGTCAAACAACCAATTGACAGGAGAAATACCGGAATTTTTAGCCAAACTTCCCCATTTGAAAGTGCTTAATTTATCAGGGAATAATCTAACAGGTTCCATTCCTGAGGCTCTGAAGGACAAGTCGAATACCACTTTGATATTGAGTTTGGACGGAAATCCAGGACTTTGTCAGACAGGTTCGTGCAGAACCGCAAAACAGAAGTCCATTATAGTACTTGTTGTATCTGTAGCAGCTTCTGTAGCAGTTCTTGTAATAATAGTCTGCACAACTGTGTTACTCTGCAGACATAAAAGGAAAAAGCAAAGAGGACTGATGGTTACTTCATCGAAGAAGGAAGGGCAGCTGAAATCgaaaaatttaacattttgttACTCTGAGGTTCTTGGGATTACCGACGACTTTAAAAATGTAATTGGAGAAGGAGGATTTGGAACTGTGTACCTTGGTACACTGCAAGACGGTACACAAGTTGCAGTCAAGTTACTTTCTAAGTCATCAAAACAAGGGTTTAAGGAATTTCAATCTGAGGCAGAACTGTTGATGATTGTTCATCATAGAAATTTGGTTGCTCTTGTTGGCTACTGTGATGATGGTGACATGAAAGCACTGATTTATGAATATATGGCTAAAGGAAATCTCCAACAACATTTGTCAGATAAGAACCCATATGTTTTGAACTGGAATGAAAGACTTCAGATTGCATTGGATGCAGCATGTGGATTGGACTATCTACATAATGGTTGTAAGCCACCAATTATCCATAGAGATCTAAAAACTTCCAACATCTTGCTTAGCGAAAACATGCAAGCCAAGATTGCTGACTTTGGACTCTCCAGAGCTTTTGCCAATGACATTGACACTCATATTTCAACTAGCCCTGCAGGCACATTTGGTTACATTGATCCTGAATTCCATTGTTCTGGAAACCTGAACAGAAAAAGTGATGTTTATAGCTTTGGGATAATTTTGCTTGAGCTATTGACTGGCCAGCCAGCAATAATAGGAAGAGCTGATAACGCCATTCACATACTTCAGTGGGTCACTCCAAAGATGAAGAATGGGGATATCCAATCCATCGTTGATCCAAGGTTAGAGgggaaattcagtactacttcAGCATGGAAGTTTTTAGAGATAGCCATGTACTGCACTCCACCAGCTGCAATCCAAAGGCCTGATATAGGTCATATAGTAAGTGATCTAAAGGAATGTTTGGCTCTGGAAATTTCCCTTGAAACTGCAGAAAGCAACAGTAAAATCTCAAACACTACATCCCATATCAGTTATTGCTCCCCTGATTCTGACATGGTTCCATATGCTAGGTAA 2724 0.4027 LALKLRYCALPLNVIAFKMKKRELAEWIMVLDVFVSSSILLLITNLGQVVADTTNSSGVISIDCGVIYDNWDENSFFHEGDDARFVESGKTARVASAFESEDHQIGKQLNTLRFFPEGRRNCYTLEPKLGENNNYLIRAYYAYGNYDYTNSTPTFDFHLGVNFWSTTSLDDPRYYRRVDVIHVSPTKKMDVCLMNTGKGTPLISLLELWPLQNSVYRPISNSLPLDLMVRSSLGIKDDNIGFIRYSSDIYGRSWFNGNIEIQNAARISAPAAIDGDEGVYKLPKEVLSTAVQSLDVNSSLVINLNDMDILYEYYVYLHFYDFTEESKSQQRKMDITFTDTITASLTLEYQKPITLFQNIKQGNYFDNISIASAPGSGLPAMINAYELLLEITTVDAMRNIKHGYKITRISWQGDPCMPKECIWEGLTCNYSDSIPRVISLNLSSSTLMGEIYDSFSNLINLESLDLSNNQLTGEIPEFLAKLPHLKVLNLSGNNLTGSIPEALKDKSNTTLILSLDGNPGLCQTGSCRTAKQKSIIVLVVSVAASVAVLVIIVCTTVLLCRHKRKKQRGLMVTSSKKEGQLKSKNLTFCYSEVLGITDDFKNVIGEGGFGTVYLGTLQDGTQVAVKLLSKSSKQGFKEFQSEAELLMIVHHRNLVALVGYCDDGDMKALIYEYMAKGNLQQHLSDKNPYVLNWNERLQIALDAACGLDYLHNGCKPPIIHRDLKTSNILLSENMQAKIADFGLSRAFANDIDTHISTSPAGTFGYIDPEFHCSGNLNRKSDVYSFGIILLELLTGQPAIIGRADNAIHILQWVTPKMKNGDIQSIVDPRLEGKFSTTSAWKFLEIAMYCTPPAAIQRPDIGHIVSDLKECLALEISLETAESNSKISNTTSHISYCSPDSDMVPYAR 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0251 907 SMART serkin_6 598 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0251 907 SUPERFAMILY Protein kinase-like (PK-like) 584 867 IPR011009 -
Sto9g0251 907 Pfam Leucine Rich repeats (2 copies) 460 499 IPR025875 -
Sto9g0251 907 Gene3D Ribonuclease Inhibitor 394 515 IPR032675 -
Sto9g0251 907 ProSiteProfiles Protein kinase domain profile. 598 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0251 907 CDD STKc_IRAK 604 869 - -
Sto9g0251 907 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Sto9g0251 907 Gene3D Phosphorylase Kinase; domain 1 580 673 - -
Sto9g0251 907 ProSitePatterns Protein kinases ATP-binding region signature. 604 626 IPR017441 GO:0005524
Sto9g0251 907 Pfam Protein tyrosine and serine/threonine kinase 600 867 IPR001245 GO:0004672|GO:0006468
Sto9g0251 907 ProSiteProfiles Leucine-rich repeat profile. 484 506 IPR001611 GO:0005515
Sto9g0251 907 SMART LRR_typ_2 482 505 IPR003591 -
Sto9g0251 907 SMART LRR_typ_2 458 481 IPR003591 -
Sto9g0251 907 Pfam Malectin-like domain 62 387 IPR024788 -
Sto9g0251 907 PRINTS Leucine-rich repeat signature 482 495 - -
Sto9g0251 907 PRINTS Leucine-rich repeat signature 461 474 - -
Sto9g0251 907 ProSiteProfiles Leucine-rich repeat profile. 460 483 IPR001611 GO:0005515
Sto9g0251 907 PANTHER OS07G0107800 PROTEIN-RELATED 53 887 - -
Sto9g0251 907 Gene3D Transferase(Phosphotransferase) domain 1 674 892 - -
Sto9g0251 907 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 53 887 - -
Sto9g0251 907 SUPERFAMILY L domain-like 420 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0251 Sto-Chr9 2343143 2350969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0251 39 907 Receptor kinase-like Gene Family AT2G28990 40.044 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto9g0251 Malectin_like 1.7e-68 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0251 - - vun:114194066 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0251 9 2343143 2350969 Sto9g0251 9 2343143 2350969 ECH