Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0248 ATGAATGGCGATGCAGGTTTCATAAGCATTGACTGTGGGGCAAAGGAGGATTACGTGGAGGAGACAAGTGGGATTTGGTACGAGACAGATGAAAAGTTCATAGGAACTGGAAACACTTATCCAACATCCCCCGACTTTTCATTCGATAGTAGTCCAACCGTAGATGGGCCGCTTAGGACGCTAAGAAGCTTTCCAGAGGGAGAACGAAATTGTTACTCATTGAAACCCAAACAATCCAACAAGTATATGATTAGAGCATTGTTTGCATATGGGAATTACGACAACAAAAACCAAGTCCCAATTTTCGACCTCTACTTGGGTGTCAACTACTGGACAACAATTCGATTGCATAATAATCACCCTAAGGATTTGTCAAATAATGAATTAACTGGACAACTCCCAAAATTTCTTGCAAATCTTCCTAATTTGAAATTACTTAATTTGACCGGAAACAAGCTCACAGGTATAATTCCAAAGGGTTTGAGGGAAAAGGCTAATTTGCAGCTGAGTGTGGCAAACAATCCAGGTCTTTGTCAGACAGATTCATGCAAAAAACACAAGTTTGTAATTCCACTTATTGCATCAATTGCAGTTTTGGTCATAATTGTCATGGTTTCTTTGATCATTTGGAGACTCAGAAAGAAAAGATTAGATCAATCACAGAGGACAAGATTTCTGAAACAAAAGAATCAAGCCTTTTCTTACTCTCAGATTCTTCGTATCACCAACAATTTTGAAACTACTATTGGCGAAGGAGGATTCGGAAAAGTTTATCTTGGTACTTTAGAAGATGGTACTCAGGTTGCAGTAAAAATACTTTCTTCATCATCAAGACAAGGATATAAGGAATTTCAGTCAGAgGCTCAACTCTTAACTGTTATTCATCATAAAAACTTGGTTTCTCTAATTGGTTATTGTAATGAAGACAACGTCAAAGCATTAATCTATGAATATATGGATAATGGAGACCTTAGCCAACTATTATCAGAGAAAAATCCAAATGTTCTGAAGTGGAATGAGAGACTTCAAGTTGCAGTGGATGCAGCAAAAGGACTAGAGTATCTTCATAATGGCTGTAAAACACCAATAATCCATAGGGACTTAAAGCCATCCAACAtcttattaaataaatcaatGCTGGCTAAGATTGCTTATTTTGGGTTATCTAAAGCATTTCAAAATGACATAGATTCTCATCTATCAACTCAACCAGCCGGTACACCTGGTTATATTGATCCTGAATTCCAAAGATCTGGAATCTTGAATAAGAAAAGTGACATTTATAGCTTTGGGATAATTCTGCTTCAGCTAATCACTGGTCATCCTCCCATAAGACGATTTGAGAAAATCAGTTTCATTGTTGATTGGGTTGGTCCTAAAATAGAATGTGGGGATATTAAAGGCATTGTTGATTCAAGGTTAGATGGAGTATTTGGTGTTATTTCTGCATGGAAAGTTGTTGAGATTGCAATGTCATGCACTGCATCAGAACCAACCCAAAGGTCAGACATAAGTTACATATTGCAAGAACTGAAGGAATGTTTAGCTTTGGAAATGGATAATGTGAAAACACACAAGAATGCATCAAGCAGTTCACTCAGTTATATAGGTCACGATGAATCAATTACCATTCCCTCAGCTAGGTAG 1647 0.3704 MNGDAGFISIDCGAKEDYVEETSGIWYETDEKFIGTGNTYPTSPDFSFDSSPTVDGPLRTLRSFPEGERNCYSLKPKQSNKYMIRALFAYGNYDNKNQVPIFDLYLGVNYWTTIRLHNNHPKDLSNNELTGQLPKFLANLPNLKLLNLTGNKLTGIIPKGLREKANLQLSVANNPGLCQTDSCKKHKFVIPLIASIAVLVIIVMVSLIIWRLRKKRLDQSQRTRFLKQKNQAFSYSQILRITNNFETTIGEGGFGKVYLGTLEDGTQVAVKILSSSSRQGYKEFQSEAQLLTVIHHKNLVSLIGYCNEDNVKALIYEYMDNGDLSQLLSEKNPNVLKWNERLQVAVDAAKGLEYLHNGCKTPIIHRDLKPSNILLNKSMLAKIAYFGLSKAFQNDIDSHLSTQPAGTPGYIDPEFQRSGILNKKSDIYSFGIILLQLITGHPPIRRFEKISFIVDWVGPKIECGDIKGIVDSRLDGVFGVISAWKVVEIAMSCTASEPTQRSDISYILQELKECLALEMDNVKTHKNASSSSLSYIGHDESITIPSAR 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0248 548 CDD STKc_IRAK 249 513 - -
Sto9g0248 548 Gene3D Ribonuclease Inhibitor 86 188 IPR032675 -
Sto9g0248 548 SUPERFAMILY Protein kinase-like (PK-like) 225 511 IPR011009 -
Sto9g0248 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Sto9g0248 548 PANTHER OS07G0107800 PROTEIN-RELATED 4 117 - -
Sto9g0248 548 PANTHER OS07G0107800 PROTEIN-RELATED 123 531 - -
Sto9g0248 548 Gene3D Phosphorylase Kinase; domain 1 206 318 - -
Sto9g0248 548 Pfam Malectin-like domain 10 122 IPR024788 -
Sto9g0248 548 Pfam Protein tyrosine and serine/threonine kinase 245 509 IPR001245 GO:0004672|GO:0006468
Sto9g0248 548 SMART serkin_6 243 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0248 548 ProSiteProfiles Protein kinase domain profile. 243 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0248 548 SUPERFAMILY L domain-like 103 168 - -
Sto9g0248 548 Gene3D Transferase(Phosphotransferase) domain 1 319 537 - -
Sto9g0248 548 ProSitePatterns Protein kinases ATP-binding region signature. 249 271 IPR017441 GO:0005524
Sto9g0248 548 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 123 531 - -
Sto9g0248 548 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 4 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0248 Sto-Chr9 2312013 2315455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0248 123 516 Receptor kinase-like Gene Family AT2G19230 50.495 1.75e-128 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto9g0248 PK_Tyr_Ser-Thr 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0248 - - pop:7494617 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0248 9 2312013 2315455 Sto9g0248 9 2312013 2315455 ECH