Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0245 TTGAACACTCTGAGAAGCTTCCCAGAAGGAAAAAGGAACTGCTACACTCTGAAACCAAAACAGGGCAAGAACCACAAGTATCTCATCAGAGCATACTTTGCATATGGAAATTACGATGGCAAAAATCAAACTCCAATCTTTGACTTGTACGTTGGGGTCAATTATTGGGACACAGTTAATCTTGGAAAGTATTATTACATTTCGGAGATTATTCATACTCCCACAACCGACACAATACATGTGTGCCTCGTCAAAACCGTCGTCGGAATTCCTTTCATTTCTGCGTTGGAATTGCGACCTCTGAACAATTCTATTTATCAAACCCCATTGCCTTCTTCTCAATCACTTTTAATCAATCAAGGAATGTTTGATGTTGCCTCCACAAACATAGCCACGCACAGCAGGTACAAGGATGACATTTATGATCGTCTGTGGCGCACAATAAATGTAGCATATTGGTACCAGTTAAATGGATCAGTAGATATTGATCCTGCAACCACAAACGATCCTTATAAGTTACCATCACAAGTACTGAGATCTGCAGCTCAATCATACAATCTCTCCTATTCCTTGAACTTCGATTATGACTCTATCTGGAAAGACCTTGACAAGTCCTCCAAATATTACGTCTACTTTCACTTTGCTGAAATTCAGAAGCTTCCCCTTGGACACAAAAGAATAATCAATATCACTCTTGATGATAAAACCGTACTGAGCCCTTTAACACTTGAATACTTGAAGCCACTCACCATTACTCCTCAAAATGCTACTCAAGGTTATGTTCGCTTTAACATTAGTGCAACATCACAATCCCATGCTCCTCCCATCCTCAATGCTTTTGAGGTTTATAAATTGAtatcgccactacattccccaACACACAAAACAGATGTGGATGCTATCTTGGACATCAAGAAAAGATACAAGATGTCCAAGTTAGATTGGCAAGGAGACCCATGTGTTGCAAATCTTCCATGGGAGGGACTAACCTGCAGTTCTGCCTTCAATCACACCAACGCAAGGATCATCTCATTGAACTTGAGCGCCAGTAAATTGACAGGGGAGATAGTTACTTCATTTTCACAACTCTCAGAGTTAGAGTCCTTGGATTTGTCATTTAATGACTTGTCAGGTTCATTGCCAGAATTTCTAGCTGATttgccaaaattaaaaattctTAATTTGAGTGGAAACAAGCTTTCAGGTTCAATCCCCATAGCTCTCAAGGAAAAGTCAAATCAAGTTTTGCAATTGAGTTTGGCTGATAATCCTGGACTCTGTTTGACGGATTCATGCAAAAAGAAGAAGTTTGTTATTCCACTTGTTGCCTCTATTTCAGCTTTGATTATAATAATCCTCTTGGTTTCACTAGCAATATGGATCATCTTGAAAACTAAAAAACGAAAAGGGCTTTTGACCAATTCCACAAAGGAAAAATCTTTGGAACTAAAAAACCGAGCATTTTCATATTCCAAAATTCTCAACATCACTAATAACTTGCAAAACTTGATTGGGGAAGGAGGATTTGGAAAGGTTTATTTAGGCACTCTCAAGAATGATACTAAAGTTGCTGTGAAGTTACTTTCTCAATCATCAGTCCAAGGTCATAGAGAATTTCGCTCAGAGTTAGAACTCTTAATGGTTGTTCATCATAGACACTTAGTTTCTCTAATTGGATATTGTGAAGAAGGTGGCGTGAGAGCATTAATTTATGAATATATGGCTAATGGCAACCTCCGCGAACATTTATCAGATAAGAACCCTAATGCTTTGAAATGGAAAGAGAGACTTCAAATTGCATTAGACTCAGCATATGGATTGGACTATCTGCATAATGGGTGTAAACCGCCAATAGTGCACAGAGACTTGAAGACTTCCAACATTTTGTTGAATGAAAACATGCAAGCTAAGATAGCAGACTTTGGTTTGTCTAGAACTTTTAAAAATGAGATTGACTCTCATATATCAACTCGTCCTGCTGGAACATTTGGATACCTTGATCCTGAATACCAAACCTCTGGAAACCTGACAAGAAGAAGTGATGTTTATAGTTTTGGAATAATTCTGCTTGAGCTAATAACAGGTCAACCAGCAGTAAGAAGAGAAGGTGACACATTCAATCACATTATTCAATGGGTTACTCCTAAACTTGAAAATGGGGATATTCACTCCATTGTAGATCCAAGGTTGCAAGGAAATTATAGTGCTAATTCTGCTTGGAAATTTGTGGACATAGCCATGTCATGCACTGCAAAATCTGCTATTCAAAGATCTGATATAAGTCAAATAGTAGTTGAAGTAAAGGAATGTTTGGCCTTGGAAATGAGCACAGAAAAGAACATGAGAAAAACTAATTCAAACAGTTCCTTGTATATTAATTCTATGCAGTTTGACTCAGATTTCTTGCCATCTGCTAGGTAG 2421 0.3746 LNTLRSFPEGKRNCYTLKPKQGKNHKYLIRAYFAYGNYDGKNQTPIFDLYVGVNYWDTVNLGKYYYISEIIHTPTTDTIHVCLVKTVVGIPFISALELRPLNNSIYQTPLPSSQSLLINQGMFDVASTNIATHSRYKDDIYDRLWRTINVAYWYQLNGSVDIDPATTNDPYKLPSQVLRSAAQSYNLSYSLNFDYDSIWKDLDKSSKYYVYFHFAEIQKLPLGHKRIINITLDDKTVLSPLTLEYLKPLTITPQNATQGYVRFNISATSQSHAPPILNAFEVYKLISPLHSPTHKTDVDAILDIKKRYKMSKLDWQGDPCVANLPWEGLTCSSAFNHTNARIISLNLSASKLTGEIVTSFSQLSELESLDLSFNDLSGSLPEFLADLPKLKILNLSGNKLSGSIPIALKEKSNQVLQLSLADNPGLCLTDSCKKKKFVIPLVASISALIIIILLVSLAIWIILKTKKRKGLLTNSTKEKSLELKNRAFSYSKILNITNNLQNLIGEGGFGKVYLGTLKNDTKVAVKLLSQSSVQGHREFRSELELLMVVHHRHLVSLIGYCEEGGVRALIYEYMANGNLREHLSDKNPNALKWKERLQIALDSAYGLDYLHNGCKPPIVHRDLKTSNILLNENMQAKIADFGLSRTFKNEIDSHISTRPAGTFGYLDPEYQTSGNLTRRSDVYSFGIILLELITGQPAVRREGDTFNHIIQWVTPKLENGDIHSIVDPRLQGNYSANSAWKFVDIAMSCTAKSAIQRSDISQIVVEVKECLALEMSTEKNMRKTNSNSSLYINSMQFDSDFLPSAR 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0245 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Sto9g0245 806 PANTHER OS07G0107800 PROTEIN-RELATED 2 790 - -
Sto9g0245 806 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0245 806 Pfam Leucine rich repeat 344 400 IPR001611 GO:0005515
Sto9g0245 806 SMART serkin_6 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0245 806 Gene3D Ribonuclease Inhibitor 296 420 IPR032675 -
Sto9g0245 806 Gene3D Transferase(Phosphotransferase) domain 1 574 795 - -
Sto9g0245 806 CDD STKc_IRAK 504 769 - -
Sto9g0245 806 Gene3D - 117 285 - -
Sto9g0245 806 SUPERFAMILY L domain-like 322 428 - -
Sto9g0245 806 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Sto9g0245 806 Pfam Malectin-like domain 2 284 IPR024788 -
Sto9g0245 806 SUPERFAMILY Protein kinase-like (PK-like) 480 764 IPR011009 -
Sto9g0245 806 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 2 790 - -
Sto9g0245 806 PRINTS Leucine-rich repeat signature 366 379 - -
Sto9g0245 806 PRINTS Leucine-rich repeat signature 387 400 - -
Sto9g0245 806 Pfam Protein tyrosine and serine/threonine kinase 500 765 IPR001245 GO:0004672|GO:0006468
Sto9g0245 806 Gene3D Phosphorylase Kinase; domain 1 479 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0245 Sto-Chr9 2260225 2295728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0245 1 806 Receptor kinase-like Gene Family AT2G19210 44.336 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto9g0245 Malectin_like 4.7e-78 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0245 - - mtr:MTR_8g015040 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0344 1 2774421 2778454 Sto9g0245 9 2260225 2295728 CCT
Sto9g0245 9 2260225 2295728 Sto9g0245 9 2260225 2295728 ECH