Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0222 ATGGCGGGAGATACGGAAATCCAAGTCCACTGGATTCAGAAAATCGTTGAGAAAGAGCTAGAAATTCGCGAAATTGATCTTTTCACTCTCAAATCTTTCTTTCTTCGTTACTACCATACCATACCATGCACTCTCACGCTCACACAcccaagCTCTGATGACGAGAACAAGCCGGATTTTCGCGAGATCGATTTTGGTTCGCCGGTATCGCCATCGCAGACTCCTCGGAGTACTAGTTCCAGTTCATCCGGATCCATTTATACGAAGCGATCCGGCGAGATCTCCGAATATTCTATTGAGAACAGTCCCATCGCTACGCGGAGCCTTCGATCTCCGACGAACTCAAAACCGGCGATGATTCTTTACCCTGCCGGAAATATCTGTCCGTCGGGGATTCTGAAGACAGACATGGCCACTAATCGGAGGACGAAATCGGACGTTTTAGGCTACGGCACAGTGAATTATGGCCACGGAAACATAGTACGCGGCGGCGGCGGAGCATCGAAACCAACCGGCGGCGTGGTGATGAAAGAGGCAGCAAAGAAAGCGGCGATGAGCTTAGATCCAGAAGTGGTAAGGAGAGCGGGAAACGAGCAATACAAGAGGAGTAACTACGCAGAGGCATTGAGACTATACGATCGGGCAATTGTATTGTGCCCCTGTAATGCCGCCTACCGGAGCAACCGCGCGGCCGCGTTGACGGCGTTGCGCCGGTTGGATGAAGCGGCGGAGGAATGTGAGGAGGCTCTGAGGTTGGACACCAATTATGGAAGGGCACATCAGCATTTGGCGTCTCTGTATCTCCGGTTAGGACAAGTAGAGAATGCCAAGAAGCACCTTTTTTGTCAAAGGCAACAACCGAATCCTTTTGAATTGCAGCAATTGCAATCAGTGGAGAAGCATATTAGCAAATGTAGTAATGCTCGAAGGATAGGTGATTGGAAAAGTGTCCTCATGGAAATTCATGCTGCTATTGATGCTGGAGCAGATTCTTCGCCTCagCTCTTTATGTGCAGAGTAGAAGCCCTTTTGAAGATGCACCAAATTGATGAAGCAGTATCGAGTTTGTCAAATATTCCCAAAACCGAATCGCTTCTGAAATCCTCTTCCCAGGAAAAGTTTTTTGGGATGATTTCTGAAGCTTACTTCTACTTTGTCGGAGCTCAAGTTGATATGGCTACGGGGAGGTTTGAGAGTGCAGTAACAGCTGCTGAGGAGGCTAGTCTCATTGATCCCCGAAGCATTGAAGTTGGTGTTCTGGTGGCCGATATGAAGATAGTGGCTAGAGCTCGAGCAAGAGGCAATGATCTTTACAATTCTGAAAGGTTCACAGAAGCTTGCTCTGCGTACGATGAAGGTCTGAGGCGGGACCCATCAAACTCTGTTCTCTACTGCAACAGAGCTGCTTGTTTTTTCAAACTCCGACAATGGGATCGATCAATTCAAGACTGTAATCGGGCTTTACAGATCCAACCGCGTTACACAAAAGCCCTTCTTCGAAGGGCTGCTTCAAACTACGAGCTAGGAAAGTGGGGAGAAGCAGTTAAAGATTATGAGACCCTGCGAAGAATGCTTCCGGATAACAATGACATTTCTCAAGCTTTATTTCACGCACATGTTGCCTTAAAGAAATCTCGCGGGGAAGAAGTATCCAATTTGACATTTGGTGGTGAAGTGGAATCAATATCTTGTCTTGAGCAGTTAAGATCTACAATATCTTTACCAGGTGTATTTGTTGTCTATTTTGCAATTGGATCTTACTTGCAATGCAAGCAAACTTCGCCATTTGTGAATACACTTTGCAATCGCTATCCTTCTATAAGCTTCCTCAAGATGGATATTGAAGAAAGGCCAGAAGTTGCAAGTGTTGAGAACATCATAGTGATACCAACCTTCAAGATCTACAAAAATGGGAGGCAAGTGAAGGAACTTGTCTTCCCTAGTCATGATTTGTTGGAACACTCTGTGAGGCATTACAGCTTTTAA 1986 0.4607 MAGDTEIQVHWIQKIVEKELEIREIDLFTLKSFFLRYYHTIPCTLTLTHPSSDDENKPDFREIDFGSPVSPSQTPRSTSSSSSGSIYTKRSGEISEYSIENSPIATRSLRSPTNSKPAMILYPAGNICPSGILKTDMATNRRTKSDVLGYGTVNYGHGNIVRGGGGASKPTGGVVMKEAAKKAAMSLDPEVVRRAGNEQYKRSNYAEALRLYDRAIVLCPCNAAYRSNRAAALTALRRLDEAAEECEEALRLDTNYGRAHQHLASLYLRLGQVENAKKHLFCQRQQPNPFELQQLQSVEKHISKCSNARRIGDWKSVLMEIHAAIDAGADSSPQLFMCRVEALLKMHQIDEAVSSLSNIPKTESLLKSSSQEKFFGMISEAYFYFVGAQVDMATGRFESAVTAAEEASLIDPRSIEVGVLVADMKIVARARARGNDLYNSERFTEACSAYDEGLRRDPSNSVLYCNRAACFFKLRQWDRSIQDCNRALQIQPRYTKALLRRAASNYELGKWGEAVKDYETLRRMLPDNNDISQALFHAHVALKKSRGEEVSNLTFGGEVESISCLEQLRSTISLPGVFVVYFAIGSYLQCKQTSPFVNTLCNRYPSISFLKMDIEERPEVASVENIIVIPTFKIYKNGRQVKELVFPSHDLLEHSVRHYSF 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0222 661 Pfam Tetratricopeptide repeat 463 494 IPR001440 GO:0005515
Sto9g0222 661 Pfam Thioredoxin 589 645 IPR013766 -
Sto9g0222 661 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL1 52 659 - -
Sto9g0222 661 MobiDBLite consensus disorder prediction 67 88 - -
Sto9g0222 661 Pfam Tetratricopeptide repeat 258 279 IPR019734 GO:0005515
Sto9g0222 661 SUPERFAMILY TPR-like 189 415 IPR011990 GO:0005515
Sto9g0222 661 Pfam Tetratricopeptide repeat 195 253 - -
Sto9g0222 661 ProSiteProfiles TPR repeat profile. 461 494 IPR019734 GO:0005515
Sto9g0222 661 SMART tpr_5 257 289 IPR019734 GO:0005515
Sto9g0222 661 SMART tpr_5 461 494 IPR019734 GO:0005515
Sto9g0222 661 SMART tpr_5 427 460 IPR019734 GO:0005515
Sto9g0222 661 SMART tpr_5 381 414 IPR019734 GO:0005515
Sto9g0222 661 SMART tpr_5 495 528 IPR019734 GO:0005515
Sto9g0222 661 SMART tpr_5 223 256 IPR019734 GO:0005515
Sto9g0222 661 SMART tpr_5 189 222 IPR019734 GO:0005515
Sto9g0222 661 Gene3D Glutaredoxin 555 660 - -
Sto9g0222 661 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 52 659 IPR044534 -
Sto9g0222 661 SUPERFAMILY TPR-like 430 544 IPR011990 GO:0005515
Sto9g0222 661 MobiDBLite consensus disorder prediction 48 88 - -
Sto9g0222 661 SUPERFAMILY Thioredoxin-like 516 646 IPR036249 -
Sto9g0222 661 CDD TRX_family 566 645 - -
Sto9g0222 661 ProSiteProfiles TPR repeat profile. 189 222 IPR019734 GO:0005515
Sto9g0222 661 Coils Coil 229 249 - -
Sto9g0222 661 Gene3D Tetratricopeptide repeat domain 188 547 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0222 Sto-Chr9 2038494 2046504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0222 426 568 U-box Gene Family AT3G07370 24.581 1.36e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0222 - - tcc:18594167 713.375