Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0218 ATGGCAGACTTTGGGAGTTCAGAAGGAGATTTCTCATGGACTTGTCTCAGAGATTTGGATTTGACATCCTTTTGCACTCAAAGGAGCATAGTAGATGTTGTGAACATACTCTTTCTCTGTGCTTTCTACTTATCTTTTCTCAGCAGTTTCACAAGCAAAAACCATGAGAATGGCAGGCACCGCAAGGGTTGGGTTTCTCTAGCTGTCTCAATCTTTTGTGCTCTTATAAGCATTGCATATTTCAGCAATGGTTTGTGGGATCTCATAGCCAAATCTGAAGACTTCAGGCAGATGGGGTGGTTAGTTTATTTCTTCAGAGGACTAGTTTGGATTTCTCTGACAGTTTCTTTGCTTGTCCAGAGAcctaaaagtataaaaattctGAACTCTGCCTGGTGGGTTTCTTCATGTATACTTGTTTCAGCTCTCAATATTGAGATTCTGTTCAAGGGTCTTACAATTCAAATCCTTGATATGATTCAATGGTCCGTACATTTCTTGCTTGTTTTCTGTGCCTTCCAGAGCCTTTATTTTGCACCTCAAATTACCCAAAATACCACCTTATCAAAACCACTTTTAGTTGGGAATGGTGAAAATAAACAAACAGAACTAGCACATGCCAACCTTCTCAGCAAATTCACTTTCTCTTGGATCAATTCCTTACTCAGTTTGGGTTATTCAAAGCCACTAGATCTTGAAGACATCCCTTCTCTTGTTTCAGAAGATGAAGCTGAAATAGCCTTTAATAAGTTTTCTCATGCATGGGATTCCCTTTTGAAGGATGGTAGGAAGaagaaagataataaaaatttggttatTTGGTCTATAGCAAGAGTTTATCTGAAAGAGAATATACTCATAGCAATGTGTGCATTGCTCAGGACAATTGCTGTGGCAGCTTCTCCTTTGGTGCTCTATGCTTTTGTGAACTATTCAAATAACGAAGAGGAAAACCTGAAAGAAGGTTTTGCCATACTGGGGTGTCTGATTTTGAGCAAGATTCTTGAATCTTTGCCTCAAAGGCATTGGTTTTTTCACTCAAGAATGtcaggaatgagaatgagatcaGCTTTAATGGTTGCAATCTATAAGAAGCAGTTGAAGCTTTCAAATTCAGCTAGAAGAAGGCACTCAAGTGGAGAAATAGTGAATTACATAGCAGTTGATGCCTATAGAATGGGAGATTTTCCATGGTGGTTTCATTCCTTGTGGACTTCTTCATTGCATCTTTTGTTAGCTATTGGGGTCCTTTTTGGTGTTGTGGGTCTTGGTGCTCTTCCTGGTTTAGTGCCTCTGATCATATGCGGTCTTCTCAATATACCCTTTGCAAAGATCATACAGAAGTGTCAGTCAAAATTTATGGTTATTCAGGATGAGCGTCTGAGATCAACTTCAGAGATCCTAAATAGTATGAAAATCATCAAGTTACAATCTTGGGAGGAAAAGTTCAAGACTTTGATAGAAAGCTTAAGAGAGAAAGAGTTCAAATGGCTGTCTAAGGCACAGTTTTTGAGAGCTTATGGGACATTTATCTATTGGATGTCTCCTACCATGGTTTCCTCTGTGATTTTCTTGGGATGTGTTCTTTTTCAGAGTGCACCTTTGAATGCAGGAACCATATTCACAGTTCTTGCAACTTTGAGGAGCATGGCAGAACCTGCAAGAATGATCCCAGATTGTCTTTCTGTAATGATTCAAGTTAAAGTATCCTTTGATCGTCTCAACACTTTTTTGCTTGATGATGAGCTGAATGATGATGGTCATGGAATTGGAAGAAACTCAAAGGAAATTTCTGCTAATAGTGTGGAAATTCAAGCAGGTAACTTCACTTGGGATCAGGAATCGATGCCTCCAACTTTAAGGGATTTGAATCTAGAAATCAAATGGGGGCAAAAAACTGCAGTTTGTGGGCCAGTTGGAGCAGGAAAATCATCCCTCCTATATGCAATACTTGGAGAGATACCCAAAACTTCAGGAAATGTCAAAGTGTGTGGAACACTAGCATACGTTTCTCAAACATCTTGGATCCAAAGTGGGACAATTCGTGATAATGTACTCTTTGGAAAACCAATGGATAAAGCCAGATATGAGAATGCCCTTAAAGTTTGTGCATTGGATAAGGATATCAATGTTCTTAGCCATGGTGATCTTACAGAAATAGGTCAAAGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATACAACTAGCTCGAGCAGTATATAACGATGCTGATATTTATCTCTTAGATGACCCTTTCAGTGCAGTAGATGCTCATACTGCGGCTATTCTGTTTAATGATTGTGTCATGACTGCTCTGAGAAAGAAAACAGTCATTCTAGTGACTCATCAGGTGGAGTTTCTCTCACTAGTTGATAAAATCCTGGTAATGGAGGGTGGAGAAGTTACTCAATCAGGAAGTTATGAAGATCTTCTGAAAAAAGGGACAGCCTTTGAGCAACTTGTGAATGCCCACAGAGAAGCCATATCTAGATCAGATCAAAACTATGAAACTCAGGGAGAATCTGAGGATGTAATTAGAGTTATTCAGCCATTAGAGTCCTATGGCTTCTATctcaaaaaggaaaagagtgagGAGGAGATTTCTTCAAAAGGTCAAGCTAGTGTACAACTtacacaagaagaagaaaaagagattggTGATGTTGGCTGGAAACCATTCTtggattatatttttcttcccaaAGGATCTTTGCTTCTTTGTTTAGTCATTTTAGCACAGATGTGTTTTATTTCTCTGCAAGCAGCATCAAATTTTTGGCTTGCAGTAGCCATTGAAGTACCAAAAGTAACTAATGGCATCTTGATTGGGGTTTACGCTGCAATTTCACTTATAAGTTCTGTCTTTGTGTGCATGAGGTCTCTCTTTGCTGCAGAACTTGGACTGAAAGCTTCTACCTCCTTCTTCTCTAGTTTCAATAATGCTATCTTCAAGGCACCTATGCTCTTCTTTGACTCAACCCCTGTAGGGAGGATTTTGACTCGAGCTTCATCAGATTTGAGTATCTTAGACTTTGATATACCTTATGCCATCAGCTTTGTAGTTTCTGGTGGAACTGAAATTCTGATAACGATTGGGATAATGGCTTCAGTCACATGGCAAGTGCTTATTGTTGCTGTTTTAGCCATAGTAGCATCAAAATACATTCAGGGTTATTATCAAGCTTCTTCAAGGGAACTGATGAGGATAAATGGAACCACAAAAGCTCCAGTTATGAATTTCACAGCAGAGACATCACTAGGAGTGGTGACTCTGAGAGCTTTCAACATGGTGGACAGATTTTTTGAAAAGTACCTAAAGCTTGTGGATACAGATGCAAAACTATTCTTTCATTCTAATGCTGCCACAGAGTGGTTAATTTTGAGGACTGAACTACTTCAGAACTTGACTGTCTTCACTGCAGCTTTATTGCTTGTTTTACTTCCTAAGGGATTTGTGTCCTCTGGCTTTGCAGCACTTTCTCTATCATATGCTTTGTCCATGACaacaatacaaatttttttgacTAGATGGTTTTGCAACTTATCAAATTTTATGGTTTCTGTTGAAAGAATTAAACAGTTCATTCACATACCAGAAGAGCCTCCCGCAGTTGTGGAGGACAGAAAACCTCCCCCTTCATGGCCTTCCAAGGGTAGGATTTATCTTCAAGGTCTAGAGATTAGATATCGTCCAAATGCTCCATTAGTGCTCAAGGGAATCACTTGTACGTTTAAAGAAGGGAGTAGAGTGGGAGTTGTAGGAAGGACTGGAAGTGGAAAAACTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTGCAAAAGGTGATATTCTTATAGATGGAATTAGCATATGCTCAATGGGCTTGAAGGATCTAAGAATGAAGCTGAGCATTATTCCTCAAGAACCAACTCTTTTCAAGGGTAGCATTAGAACCAACTTGGACCCTCTTGGCCTCTACTCTGATGATGAAATATGGAAGgCCTTAGATAAATGCCAGCTTAAGGCAACAATCAGCAGTCTACCAAATCTCCTGGACTCTTCTGTGAGTGATGAAGGTGAAAATTGGAGTGTGGGACAGAGGCAACTGTTTTGTCTTGGAAGAGTGCTTCTAAAGAGAAACAGAATTCTTGTGCTAGATGAGGCCACTGCTTCTATTGACTCTGCAACAGATGCTATTGTACAGAGAATCATTAGACAAGAATTCTCAGAATGCACTGTCATAACTGTGGCTCACAGAGTTCCTACTGTAGTAGACAGTGACATGGTCATGGTCCTCTCCTTTGGGAAAGTGCTGGAATATGATGAGCCATCAAAGCTTATGGAGACAAACTCTTCATTCTCTAAACTAGTAGCTGAGTATTGGTCTAGCTGCAAGAAGAACCTCTCATCATacacttaa 4410 0.3853 MADFGSSEGDFSWTCLRDLDLTSFCTQRSIVDVVNILFLCAFYLSFLSSFTSKNHENGRHRKGWVSLAVSIFCALISIAYFSNGLWDLIAKSEDFRQMGWLVYFFRGLVWISLTVSLLVQRPKSIKILNSAWWVSSCILVSALNIEILFKGLTIQILDMIQWSVHFLLVFCAFQSLYFAPQITQNTTLSKPLLVGNGENKQTELAHANLLSKFTFSWINSLLSLGYSKPLDLEDIPSLVSEDEAEIAFNKFSHAWDSLLKDGRKKKDNKNLVIWSIARVYLKENILIAMCALLRTIAVAASPLVLYAFVNYSNNEEENLKEGFAILGCLILSKILESLPQRHWFFHSRMSGMRMRSALMVAIYKKQLKLSNSARRRHSSGEIVNYIAVDAYRMGDFPWWFHSLWTSSLHLLLAIGVLFGVVGLGALPGLVPLIICGLLNIPFAKIIQKCQSKFMVIQDERLRSTSEILNSMKIIKLQSWEEKFKTLIESLREKEFKWLSKAQFLRAYGTFIYWMSPTMVSSVIFLGCVLFQSAPLNAGTIFTVLATLRSMAEPARMIPDCLSVMIQVKVSFDRLNTFLLDDELNDDGHGIGRNSKEISANSVEIQAGNFTWDQESMPPTLRDLNLEIKWGQKTAVCGPVGAGKSSLLYAILGEIPKTSGNVKVCGTLAYVSQTSWIQSGTIRDNVLFGKPMDKARYENALKVCALDKDINVLSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALRKKTVILVTHQVEFLSLVDKILVMEGGEVTQSGSYEDLLKKGTAFEQLVNAHREAISRSDQNYETQGESEDVIRVIQPLESYGFYLKKEKSEEEISSKGQASVQLTQEEEKEIGDVGWKPFLDYIFLPKGSLLLCLVILAQMCFISLQAASNFWLAVAIEVPKVTNGILIGVYAAISLISSVFVCMRSLFAAELGLKASTSFFSSFNNAIFKAPMLFFDSTPVGRILTRASSDLSILDFDIPYAISFVVSGGTEILITIGIMASVTWQVLIVAVLAIVASKYIQGYYQASSRELMRINGTTKAPVMNFTAETSLGVVTLRAFNMVDRFFEKYLKLVDTDAKLFFHSNAATEWLILRTELLQNLTVFTAALLLVLLPKGFVSSGFAALSLSYALSMTTIQIFLTRWFCNLSNFMVSVERIKQFIHIPEEPPAVVEDRKPPPSWPSKGRIYLQGLEIRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKTTLISALFRLVEPAKGDILIDGISICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKALDKCQLKATISSLPNLLDSSVSDEGENWSVGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAIVQRIIRQEFSECTVITVAHRVPTVVDSDMVMVLSFGKVLEYDEPSKLMETNSSFSKLVAEYWSSCKKNLSSYT 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0218 1469 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 50 1460 - -
Sto9g0218 1469 CDD ABCC_MRP_domain1 602 802 - -
Sto9g0218 1469 SUPERFAMILY ABC transporter transmembrane region 906 1202 IPR036640 GO:0005524|GO:0016021
Sto9g0218 1469 Gene3D - 581 850 IPR027417 -
Sto9g0218 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 604 825 IPR003439 GO:0005524
Sto9g0218 1469 CDD ABC_6TM_ABCC_D1 286 574 IPR044746 GO:0140359
Sto9g0218 1469 CDD ABC_6TM_ABCC_D2 904 1197 IPR044726 GO:0140359
Sto9g0218 1469 Gene3D ABC transporter type 1, transmembrane domain 871 1203 IPR036640 GO:0005524|GO:0016021
Sto9g0218 1469 Gene3D ABC transporter type 1, transmembrane domain 259 580 IPR036640 GO:0005524|GO:0016021
Sto9g0218 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1212 1455 IPR027417 -
Sto9g0218 1469 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 50 1460 - -
Sto9g0218 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 600 825 IPR027417 -
Sto9g0218 1469 Gene3D - 1205 1456 IPR027417 -
Sto9g0218 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 910 1185 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g0218 1469 Pfam ABC transporter transmembrane region 285 546 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g0218 1469 Pfam ABC transporter transmembrane region 910 1166 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g0218 1469 SMART AAA_5 1248 1441 IPR003593 -
Sto9g0218 1469 SMART AAA_5 629 802 IPR003593 -
Sto9g0218 1469 Pfam ABC transporter 620 754 IPR003439 GO:0005524
Sto9g0218 1469 Pfam ABC transporter 1239 1387 IPR003439 GO:0005524
Sto9g0218 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 285 566 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g0218 1469 SUPERFAMILY ABC transporter transmembrane region 273 580 IPR036640 GO:0005524|GO:0016021
Sto9g0218 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1224 1456 IPR003439 GO:0005524
Sto9g0218 1469 CDD ABCC_MRP_domain2 1220 1440 - -
Sto9g0218 1469 ProSitePatterns ABC transporters family signature. 727 741 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0218 Sto-Chr9 1986273 1996166 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0218 602 836 Calmodulin-binding Proteins AT2G36910 27.451 6.89e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0218 - - gmx:100784827 2072.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0218 9 1986273 1996166 Sto9g0218 9 1986273 1996166 ECH