Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0213 ATGAATGATGATACTATTTCTGTATCGGAATCTTCGGTAGGTGTTGCTTCCAATGTTATCGATAGCACAAAAGCATCATTCGCTAGTCTCCTTTGGCTCTGTGCCGTTAGACAATCCTCCTTTGAATCTTCTTCAAATTCAGGGAGtttgaaattgaaatatatatatatatttgcatcaCAAGCTGGGGACTGCAACGTCTTGCTTTCTGAACCAAAAGGCCATCTGATTCTTCACGGATTTGGTACTATTTTAGGAGCGTACTACGGAATCCCTCTTGCTTCTGAGAAAGTTGGAAGAGAGCTTACTTGTGAGATTCTCCTTCATATTTTGAGTTCTGAGCATTTAGAAACACATACGGGTTTGATGGGTCGAGAACAACAGAAGCGAGGGAAGCAAGAGAAAGTTTGTGATGCTGCTGAGAAGGTTATTGTCGCCGTTAAGGCATCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCTTTGACTCATGTTGTTCAACCTGGGGATTGCATTACTCTGCTAGTAGTTGTTCCTTCACAAAGTTCAGGTAGACGTTTATGGGGTTTTCCGAGATTTGCTGGTGATTGTGCCAGTGGCCACAagaaatcttcttcttcttcttcttcttcttcttcttcgtcagGAACAAGCTCAGAGCAGAAGTGTGATATTATCACCGATTCTTGTTCTCAGATGATCCTTCGGCTTCATGGCGTCTACGACCCAAATAAGATaaatgtcaaaattaaaattgtttctgGATCACCGTGTGGAGCAGTGGCTGCAGAGGCCAAGAAAACCCAAGCCAGTTGGGTCGTATTAGACAAACATCTCAAAAACGAGGAAAAACGGTGCATGGAAGAGCTACAGTGCAACATTGTGGTAATGAAGCGATCCCAACCAAAAGTTCTTCGTTTAAATTTGGTTGGATCCCAAAAAAAGGATCATGAAAAAGTAGGTCCAGTATCATCTAAGACAGACGAGATTCCAGGAAAACAATCCAAAAAGAAGAATGAttctttaaattccataaaagGACCAGTTGTCACTCCTACAAGCAGCCCAGAGCTTGGGACACCGTTTACTGCAACTGAAGCTGGTACTTCGTCAGTTTCAAGCTCAGATGTAGGAGCCTCACCATTTTTCATCCCAGAGATGAATAGTGAGTTGAAGAAAGAGGAAACAATCATGGAAAATCAAGAACTCGATGATACTAATTCAGACACAGACAGTGAAAATCTATCCACATCTTCTGCAAGCTTGAGATTTCGACCATGGATCACAGAATTACTTTTACATCAACGATCATCTCAGCACACAGAAGAAAGACCAGAGAGACCTTATGATAAGCCTCAATCATCTACGACCAGAGCTTTGCTGGAGAAGTTCTCGAAGCTTGATAGAGAAGCTGGAATTGATATCTCTAACAGATGGACAACTGAGTTGGATTTCAGCGGAAATGTAAGAGAAGCAATATCATTATCTAGAAATGCCCCTCCTGGAGCCCCTCCTTTATGTTCAATATGTCAACACAAGGCACCAATTTTTGGAAAGCCCCCAAGGTGGTTTAGCTATGCTGAATTGGAACTTGCTACTGGTGGATTTTCACAAGCCAACTTCTTGGCAGAAGGAGGATTTGGATCTGTTCATAGAGGGATTTTACCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAATTTTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAGCATCGAAATGTTGTTATGCTGATTGGGTTCTGTATAGAGGATAAGAGAAGGCTATTGGTTTATGAGTATATATGCAATGGATCTCTAGATTCTCATTTATATGGGCGACAACAGGAGCCATTAGAATGGTCTGCAAGGCAAAAAGTTGCTGTTGGAGCTGCCCGAGGGCTGCGATATCTCCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGTGACATGCGGCCAAACAACATTCTGATCACCCATGATTTTGAGCCACTGGTTGGTGATTTTGGACTAGCAAGGTGGCAGCCTGATGGAGACACAGGCGTTGAAACTAGAGTCATAGGAACATTTGGGTATTTGGCTCCAGAATACGCTCAAAGTGGCCAAATTACTGAAAAAGCTGATGTTTACTCCTTTGGAGTGGTATTAGTGGAACTTGTTACAGGGCGAAAAGCAGTGGATCTCAGTCGGCCCAAGGGACAACAGTGTCTTACTGAGTGGGCCCGTCCACTGTTAGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGCTGGGAAATCGCTATTCAGAACATGAGGTCAATTGTATGCTGCATGCTGCATCATTATGTATACGGCGAGATCCTCATTCTAGACCGCGAATGTCACAGGTTCTCCGAATACTAGAGGGCGACATGGTCATGGAAGCAAGTTACATTTCGACTTCTGGTTATGATGTTGGAAACCGGAGTGGTCGAATCCGGGCTGGCCAGCCGCAGAGGCAGCACCATTACAGTGGTCCCTTGTTAGAGGAGTCACTGGAATCGTTCAGTGGGAAACTCTCCCTAGAGAAATACAGACCATCCTCTCATTGGGAAAGGGACAAGATTAGGAGGACTACATGTGAAGATATGTAG 2649 0.4236 MNDDTISVSESSVGVASNVIDSTKASFASLLWLCAVRQSSFESSSNSGSLKLKYIYIFASQAGDCNVLLSEPKGHLILHGFGTILGAYYGIPLASEKVGRELTCEILLHILSSEHLETHTGLMGREQQKRGKQEKVCDAAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASGHKKSSSSSSSSSSSSGTSSEQKCDIITDSCSQMILRLHGVYDPNKINVKIKIVSGSPCGAVAAEAKKTQASWVVLDKHLKNEEKRCMEELQCNIVVMKRSQPKVLRLNLVGSQKKDHEKVGPVSSKTDEIPGKQSKKKNDSLNSIKGPVVTPTSSPELGTPFTATEAGTSSVSSSDVGASPFFIPEMNSELKKEETIMENQELDDTNSDTDSENLSTSSASLRFRPWITELLLHQRSSQHTEERPERPYDKPQSSTTRALLEKFSKLDREAGIDISNRWTTELDFSGNVREAISLSRNAPPGAPPLCSICQHKAPIFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGILPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQQEPLEWSARQKVAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLSRPKGQQCLTEWARPLLEEYAIEELIDPRLGNRYSEHEVNCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMEASYISTSGYDVGNRSGRIRAGQPQRQHHYSGPLLEESLESFSGKLSLEKYRPSSHWERDKIRRTTCEDM 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0213 882 MobiDBLite consensus disorder prediction 311 340 - -
Sto9g0213 882 SUPERFAMILY Protein kinase-like (PK-like) 520 809 IPR011009 -
Sto9g0213 882 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 138 838 - -
Sto9g0213 882 MobiDBLite consensus disorder prediction 199 221 - -
Sto9g0213 882 ProSitePatterns Tyrosine protein kinases specific active-site signature. 657 669 IPR008266 GO:0004672|GO:0006468
Sto9g0213 882 MobiDBLite consensus disorder prediction 200 221 - -
Sto9g0213 882 Pfam Protein tyrosine and serine/threonine kinase 540 805 IPR001245 GO:0004672|GO:0006468
Sto9g0213 882 Gene3D Transferase(Phosphotransferase) domain 1 612 819 - -
Sto9g0213 882 ProSiteProfiles Protein kinase domain profile. 536 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0213 882 MobiDBLite consensus disorder prediction 436 451 - -
Sto9g0213 882 MobiDBLite consensus disorder prediction 311 381 - -
Sto9g0213 882 PANTHER OS01G0253100 PROTEIN 138 838 IPR045271 GO:0004714|GO:0006468
Sto9g0213 882 MobiDBLite consensus disorder prediction 435 458 - -
Sto9g0213 882 Gene3D Phosphorylase Kinase; domain 1 508 611 - -
Sto9g0213 882 CDD STKc_IRAK 542 808 - -
Sto9g0213 882 MobiDBLite consensus disorder prediction 341 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0213 Sto-Chr9 1908696 1913015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0213 495 802 Trihelix Transcription Factor Family AT1G68690 52.244 2.35e-99 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Sto9g0213 PK_Tyr_Ser-Thr 3.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0213 - - gmx:100816340 1253.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0213 9 1908696 1913015 Sto1g0372 1 3028339 3032430 CCT
Sto9g0213 9 1908696 1913015 Sto9g0213 9 1908696 1913015 ECH