Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0197 ATGACAAAGTCCCGAAAtggcaccaccaccaccacacagGCTTGCGCCGCCTGCAAGTACCAGCGGCGGAAGTGCGCTCCCGACTGCATCCTCGCGCCGTACTTCCCTCACGATCGCCACCGCCAGTTCCTCAACGCCTACAAGCTCTTCGGCGTCAGCAACATCACCAAGATCATCAAGCACCTCGACCCTCCCCTCAAGGACCAGGCCATGCGCACCATCATCTACCAGTCCGACATGCGCGCCTCCGATCCCGTCCTCGGCTGCTACCGCGTCATCCTCGACCTCCAGACGCAGATCCAGCTCCATCGCGCCGAGCTCGACCTTGTACTCCAGCAACTCGCCGTGTTCCGGGCCCAGGCCCAGGCCCGTGGAGATCAGTTGAATTTGGGCCCGCGTTACGAGAACTATTACCTTACGCCTCAGGAGCAAGAGGCGTATGGGGTTGGGGTTGGGGTTGGGGGAGGTGGTGACGTGGAGGTTGACGTGGACGTGGATGCGTGGGGGAAGCAGGAAACGATGTCGCTTTCGTCGCTGTCGTTGCAGGGGCAGAATGGTAATAATGGGAGTGTTGTGGTGaacggtggtggtggtggagagGATGATCTGTATGATCATAAGCCGTTGATTGAGATTTCTTCTGATTATGATAGAAATGATATCAGATTCGAGCCTCAGGAATTATTGGATCCCagTGATGAAGAGGTTCTGTTTAATAAGATAGACAACACAATGGTAAAAGCAGAGAGTAGTGATGAGTGCATGCTCCAACAAGctcaacctcaacctcaagatCATGATCTCATATATCTTGAATCTCACATCCACCTTACACTTGGCGTTCGCCGTCGACGCCGTCGCCGGCTTCTTTCCGGTCGGAAGAGTCACTCTGATTCCGTCACAGGAGACTCTGATTCCCACTTTGGGCGTCTTCAAGCTTCCCATCTTCGCCTTCACCTTCGTGTCCAAATTCACCTTCAGCGGCAATCCATTCTTGCTCTTCATGCTCGACTTCAATTTTCCAGCGGCGTCGCTGTCCAGTTCCCGATTGCTGCTCAGAATCGAAGCCTTCAACACCGTCGTGTTCTTCTTCCCGTGCTCGAAAGACGGGATCGTGCCGTCGCCGATGTCGACCTCATCGGAGAGAATCGAAATCGAAGTCGGCCGGTAGAAAATAGTGCCGGCGACAccgatgaggaggaggaggatgagaACGATGAGAATGAACCAGAAGCAGAAGGTACAGCACCATCGGCGGCGGCTCCGGCGGTGGTGGGGCTGTGGACGGTAGGTGGGTCTGGTTGCTCCATAGAGTTGGGCTTTGGTGGCAGGGAATGCAGGGTTAGCAGGACCACCGTTGGCGGCGGCGCCGTTGGCCGTGGGCTTGGCCGAAGGGTAGACCCTATCTGCCATGATATCAGTATAtga 1428 0.521 MTKSRNGTTTTTQACAACKYQRRKCAPDCILAPYFPHDRHRQFLNAYKLFGVSNITKIIKHLDPPLKDQAMRTIIYQSDMRASDPVLGCYRVILDLQTQIQLHRAELDLVLQQLAVFRAQAQARGDQLNLGPRYENYYLTPQEQEAYGVGVGVGGGGDVEVDVDVDAWGKQETMSLSSLSLQGQNGNNGSVVVNGGGGGEDDLYDHKPLIEISSDYDRNDIRFEPQELLDPSDEEVLFNKIDNTMVKAESSDECMLQQAQPQPQDHDLIYLESHIHLTLGVRRRRRRRLLSGRKSHSDSVTGDSDSHFGRLQASHLRLHLRVQIHLQRQSILALHARLQFSSGVAVQFPIAAQNRSLQHRRVLLPVLERRDRAVADVDLIGENRNRSRPVENSAGDTDEEEEDENDENEPEAEGTAPSAAAPAVVGLWTVGGSGCSIELGFGGRECRVSRTTVGGGAVGRGLGRRVDPICHDISI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0197 475 MobiDBLite consensus disorder prediction 385 419 - -
Sto9g0197 475 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 9 127 - -
Sto9g0197 475 MobiDBLite consensus disorder prediction 395 411 - -
Sto9g0197 475 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Sto9g0197 475 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 127 - -
Sto9g0197 475 Pfam Lateral organ boundaries (LOB) domain 14 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0197 Sto-Chr9 1741310 1749078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0197 13 229 AS2 family AT3G13850 45.532 7.41e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto9g0197 LOB 5.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0197 - - pvu:PHAVU_010G138500g 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0197 9 1741310 1749078 Sto1g0393 1 3235908 3240738 CCT