Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0163 ATGATGGAGTTGAATTTAGAAAGTATGCCTTTCAAGGAATTGCCAATTGGATTATGTCTAAGAAAACTTGAATATCTCAATCTACTTTTCTGTGGAAATCTCACACATCTTCCGAGCAATTTTGTTGAACTAACATCTCTGCGCTATCTTATGATTGGTTTCTGCCACAAACTTGCATCTCTACCGCAGCTTCCACCATCGATTGGACAACTATATGCAACCTGTTGTAGTTCCTTAGAAATTGTACAGTTTACTTCAACGGCTGGTGATCCTCTCTACAGAAACATGATATCTATTGATTTGGGTGATTGCCTGAAATTGGATGAACATTCATGCAACGCTGTGGAATTAACAGCTCGTCTCAACCTAAGAAATTATGCATTTAAAGCCCCCCAAGAACAATGCAAGATTCTTACTCGAATAGTCTCAGTGTTGGCATCTTCTTGGGAAACAATGATGTTGGGTTTCATGACACTTGTGACACTGCTCATTCATTCAGTTGTGATTCAAACTCAGAGCATAAATGAAGCAGAGCTTGTAGAACAAGTTGCCAAATCGTTGTCCACAAAGTTGAATCGGATCTACCTGGGTGACTCAAGAAATAATCTTGGGACTGAAACAATTCAGAGCATATTTTCGGACGAGGTTAAATTTGGtgaaattttgtccttaaatccTCAAGTCTTTGCTAGGATGCACAAGCTGAAGTTTCTTAAAATGCCCAGTGGTCTTGCTTTTAGGAACACAGAAAATGTGGATCTTGGATATTTGCCATATGAACTAAGATTTCTTCATTGGCATTATTATCCTCTAAAATCCTTGCCGATGACATTTAGTGCAAAATATCTTTTTGAACTTGATCTGAGTTCGAGCAAGGTGGAAAAACTTTGGGATTGGGATGAAGTCAAGGTATGTAAGTGTGGGGTGATCCCAATATATGCCAACGAGGAGGAGAAAGAGGAAGATAAGGATTCTATGGTGGATGAGGATTGTGAGGAAGATGAGATAGAAGCATTCCCTCCAGCCAAGAGATTGAAATAA 1041 0.3852 MMELNLESMPFKELPIGLCLRKLEYLNLLFCGNLTHLPSNFVELTSLRYLMIGFCHKLASLPQLPPSIGQLYATCCSSLEIVQFTSTAGDPLYRNMISIDLGDCLKLDEHSCNAVELTARLNLRNYAFKAPQEQCKILTRIVSVLASSWETMMLGFMTLVTLLIHSVVIQTQSINEAELVEQVAKSLSTKLNRIYLGDSRNNLGTETIQSIFSDEVKFGEILSLNPQVFARMHKLKFLKMPSGLAFRNTENVDLGYLPYELRFLHWHYYPLKSLPMTFSAKYLFELDLSSSKVEKLWDWDEVKVCKCGVIPIYANEEEKEEDKDSMVDEDCEEDEIEAFPPAKRLK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0163 346 Gene3D Ribonuclease Inhibitor 153 332 IPR032675 -
Sto9g0163 346 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 130 - -
Sto9g0163 346 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 197 305 - -
Sto9g0163 346 MobiDBLite consensus disorder prediction 321 336 - -
Sto9g0163 346 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 130 IPR044974 GO:0006952
Sto9g0163 346 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 197 305 IPR044974 GO:0006952
Sto9g0163 346 MobiDBLite consensus disorder prediction 318 346 - -
Sto9g0163 346 Gene3D Ribonuclease Inhibitor 1 125 IPR032675 -
Sto9g0163 346 SUPERFAMILY RNI-like 4 294 - -
Sto9g0163 346 SUPERFAMILY L domain-like 3 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0163 Sto-Chr9 1450464 1457561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0163 158 305 WRKY Transcription Factor Family AT4G12020 34.146 3.34e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0163 - - gmx:100802823 101.293