Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0158 ATGAGAAGCTCATCAACTATATCACCACTTATGGCCATGGTTGTTGGAGCTCTGTCCCTAAACTTGCTGAGATGTGGAAAAAGTTGCAGACTAAGATGGATAAATTATCTAAGACCTGATTTGAAACGTGGAAGCTTCTCTTCTCAAGAAGCTGCTCTCATTATAGAACTCCATAGCATTCTAGGCAatagGTGGGCTCAGATAGCCAAGCACTTACCTGGAAGAACAGACAATGAGGTGAAGAACTTTTGGAACTCTAGCATTAAGAAGAAGCTTCTCTCTTCTCATCATCATGAAttccttcctcctccttcttcttcttcttcttctttctccacTTTTTctgatcatcatcttcttcttcttcatcatcatcatcatcctcatgattccttcttccctttcactaattcttcttcttcttcttcaaaccctaatttcatccatcctcctcctccttctcacCTATACCTTCCCactccatcaccaccaccaccaccaatccCACAACCTCTTAATGATGGTGATCTTAAAGTAGTAGACATTATTTCCTAccccaacaataataataatttccttAACCTCCAAAACCCTATTCCTGAAATCACACCTTCACCCAATAATAGTATTATTATTCCTTCTTCACACCAAGATGATGATAATATTACATGGTCAATTCTGGGTCCAAATCAAGAAATTCAAACCACCAAAAGTGATaccaataataatgataatcacTCCTCCCCTCATCATCATTTTAATATTGCTGATGAGaaattcatcaatcatcaagttcACTTGGTGGATTCCATTAATAATGTGCCTAAAATGTATGATAGCTTTGAGGATTATGTgtattcatcttcttcatcatcatcacaagACCCTCTTGCAAGAATCCAGTGTGGGTTTTACCCACAAGACCAAGCTTTTGGTGCAGTAGCCAATCATAATCAAATGGAGTACATTGATGCCATCCTATCATCGTTGCCCACGTCAGCAACAAACCCTAATATTGTTCCTTCGTCTAGCTGGGGAGAGCTTTGA 1047 0.2856 MRSSSTISPLMAMVVGALSLNLLRCGKSCRLRWINYLRPDLKRGSFSSQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSSHHHEFLPPPSSSSSSFSTFSDHHLLLLHHHHHPHDSFFPFTNSSSSSSNPNFIHPPPPSHLYLPTPSPPPPPIPQPLNDGDLKVVDIISYPNNNNNFLNLQNPIPEITPSPNNSIIIPSSHQDDDNITWSILGPNQEIQTTKSDTNNNDNHSSPHHHFNIADEKFINHQVHLVDSINNVPKMYDSFEDYVYSSSSSSSQDPLARIQCGFYPQDQAFGAVANHNQMEYIDAILSSLPTSATNPNIVPSSSWGEL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0158 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 92 IPR017930 -
Sto9g0158 348 ProSiteProfiles Myb-like domain profile. 38 88 IPR001005 -
Sto9g0158 348 PANTHER MYB DOMAIN PROTEIN 55 22 275 - -
Sto9g0158 348 SUPERFAMILY Homeodomain-like 24 94 IPR009057 -
Sto9g0158 348 Gene3D - 44 111 - -
Sto9g0158 348 Pfam Myb-like DNA-binding domain 43 85 IPR001005 -
Sto9g0158 348 SMART sant 42 90 IPR001005 -
Sto9g0158 348 CDD SANT 45 85 IPR001005 -
Sto9g0158 348 PANTHER TRANSCRIPTION FACTOR MYB26 22 275 - -
Sto9g0158 348 Gene3D - 7 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0158 Sto-Chr9 1421372 1423132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0158 22 180 MYB Transcription Factor Family AT3G13890 60.494 1.82e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto9g0158 Myb_DNA-binding 8.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0158 K09422 - gmx:102665409 152.14