Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0149 ATGGGTCGGGGGAGAATACGGGCAAGGATCCGAAGGAGCAGTCTTTACACATTTGCTTGCCTTCGACCGAGAACCTCTGAGGAGGGGGCCCATCCACTATCAGGTCCTGGGTTCTCACGAACTGTATATTGCAACCAGCCTCTTCTCCATGAAAGGAAACCTCTATATTATTGCAAGAATGACATATCGactacaaaatataatattatcacGTTTTTGCCCAAAGCTCTCTTCGAGCAGTTTCGACGGGTcgctaatatatattttcttttggctGCATGCCTCTCAGCCTCGCCAATTTCTCCTTTCACACCCGTGAGCATGATTGCTCCTTTGGCATTTGTTGTGGGGCTTAGTATGGCGAAGGAAGCATTGGAAGACTGGCGCAGATTCCTTCAGGATGTCAAAGTTAATCACCGGAAGGTTAGTGTCCATAAAGGCAATGGCGTTTTTAATTTGAAGATATGGCAGAACATAATGGTTGGAGATGTGGTAAAAGTAGAAAAGGATCAATTTTTTCCTGCCGACTTGCTTCTATTGTCTTCAAGTTATGAGGATGGCATATGCTATGTGGAAACTATGAACTTAGATGGTGAAACAAACTTGAAAGTGAAAAGATCGTTGGAGGTTACTTTGCCACTGGATAATGATGATGCCTTTAAGGATTTCAGAGGAACAATACAATGTGAAGATCCAAATCCCAGTCTTTACACATTTATTGGAAACCTTGAGTATGATCATCAGGTTTTTCCTATGGATCCTAGTCAAATTCTCCTCCGAGATTCAAAGCTGAGAAACACTGATCATGTCTATGGGGTGGTCATATTCACTGGTCATGACAGCAAAGTTATGCAGAATTCTACAAAATCTCCTTCAAAAAGGAGTAGAATAGAAAAAAAGATGGATTATATCATATATCTTCTTTTTACAGTTCTTATTTTAATATCTATGATCAGTTCAATAGGATTTGCCATAAAGACCAAATTGCAAACCCCAGATTGGTGGTACTTAAGGCCCCAGGAAACCGAGTACCAGTATGATCCAAAAAATGCTACATTGGCTGGGATGAGTCATCTCATTACTGCACTCATTCTTTATGGATATTTGATACCTATATCACTTTATGTGTCAATTGAGGTTGTGAAGGTTCTACAAGCAACCTTCATCAACCAAGACTTACAAATGTATGATGAAGAAACTGGAACACCTGCTGATGCACGCACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGATACTATCCTTTCTGATAAGACTGGCACTTTAACCTGCAATCAGATGGATTTTTTAAAGTGTTCCATTGCTGGTATCGCATATGGAGTGCGCTCTAGTGAAGTTGAACTCGCTGCAGCAAAGCAGATGGCTTCTGAttttgaggagcatgattcagATCTCTCCAATTTCCCCATGCCTAAGAATAAAGCACCTGGTTCATGGGAAAGTAATAGAACAGCTGAAGAAATTGAAATAGAGACCATTGTTACATCCAAgactaatgaaaataaaaagccTGCCATAAAGGGATTCAATTTTGAGGACAACCGCCTCATGAACTGCAACTGGTTAAAAGAGGCCAATTCTGATGTCCTTTTGTTGTTTTTCCGGATATTAGCAGTTTGCCATACTGCAATTCCTGAGCTGAATGAGGAGACTGGCAGCTTTACATATGAAGCTGAGTCACCTGATGAAGGGGCTTTCCTTGTAGCGGCAAGAGAATTTGGCTTTGAGTTTTGTAAAAGGAGTCAATCAAGTGTTGTCATTCGTGAAAGAATTTCTCCTTCCGGACAACCAGTtgaaagGGAGTACAAAATCTTCAATCTTCTGGACTTCACTAGCAAAAGAAAGCGGATGTCAGTGGTTGCACGTGATGAGGATGGCAACATTCTTCTTATGTGCAAAGGAGCAGACAGTATCATATTTGATCGATTATCAAAGAATGGAAAAACATATTTGGAGGCTACTACCAGACATTTAAATGAATATGGAGAATCTGGTTTGCGAACACTAGCCTTGGCTTATAGAAAGCTTGATGAGGAAGAGTATTATGCTTGGAACAATGAGTTCCAAAAAGCCAAAACAGCTGTTGGTTCTGACCGAGAGGAAACACTTGAGCGATTATCAGATGTGATGGAAAGAGAGTTGATTCTTGTCGGGGCTACAGCTATAGAAGACAAACTGCAAAAAGGGGTGCCCCAATGCATTGATAAACTTGCTCAAGCTGGTCTCAAGCTTTGGGTGTTAACTGGGGATAAGATGGAAACTGCAATCAACATTGGATTCGCTTGTAGTTTGCTTCGACAGTGCATGAAGCAGATATGTATAACTACTCCAAACTCAGAGTCATTTACCAATGATGTAAAAGAGGCCATCAAGGCgaacattttgaaccaaatcaCCAATGGCTCACAAATGATAAAGCAGGAGAAAGATCCACATGCTGCATTTGCGTTAATTATTGATGGTAAAACTCTGACATATACATTAGAAGATGATATGAAGCACCACTTTTTGGCATTGGCTGTTGAATGTGCATCTGTCATCTGCTGCCGTGTGTCTCCTAAGCAAAAAGCATTGGTAACAAGGTTAGTGAAAGAAGGAACAGGGAAGACCACGCTAGCAATAGGTGATGGTGCAAATGATGTGGGCATGATTCAAGAGGCAGATATTGGCATTGGTATTAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTTGCCATTGCCCAATTTCGGTTTTTGGAACGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGATATGCTACTTTTTCTACAAAAATATAGCATTTGGCTTGACCATCTTCTATTTTGAGGCCTTTACGAGTTTCTCTGGGCAATCGGTTTATGATGATTGGTACATGATATTGTTCAATGTAGTTCTTACATCATTGCCTGTCATCTCACTTGGGGTTTTTGAACAAGATGTTTCCTCAGACGTGTGCTTGCAATTTCCTGCACTGTACCAGCAAGGACCCAAAAATCTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGCAATGGTCTCTATTCTTCCCTTATCATCTTCTTCCTTAATGTCATCATCTTCTATGACCAAGCATTCCGCATCGAAGGCCAAACTGCTGACATTGCTGTTGTTGGTACCACAATGTTCACTTGCATCATTTGGGCTGTCAACCTTCAAATTGCACTAACAATGAACCATTTTACTTGGATCCAACACTTGTTTGTTTGGGGCAGTGTGGTCACTTGGTACCTATTTCTTGTACTATATGGCATGGTTTCTCCATATTATTCCAAGAGTGCCTACCAAATTCTGGTTGAAATTCTTGGTCCTGCACCTCTATATTGGATAACAACCATTTTAGTAACAGTGACATGCAATCTTCCTTATCTTACCCACATATCCTTCCAGAGATGTTTTAATCCCATGGATCATCACATCATCCAAGAAATCAAGTACTACAAGAAggacattgaggatcaaaacaTGTGGAGCCGGGAACGGTCTAAGGCCAGACACGAGACGAAGATCGGATTCACAGCAAGAGTGGAAGCTAAGATCAGGCAGTTGAAGGGTAGGCTGCAGAAGAAGCAATCATCTATTGGTGCTTTATCCCCATCATAA 3675 0.3997 MGRGRIRARIRRSSLYTFACLRPRTSEEGAHPLSGPGFSRTVYCNQPLLHERKPLYYCKNDISTTKYNIITFLPKALFEQFRRVANIYFLLAACLSASPISPFTPVSMIAPLAFVVGLSMAKEALEDWRRFLQDVKVNHRKVSVHKGNGVFNLKIWQNIMVGDVVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEVTLPLDNDDAFKDFRGTIQCEDPNPSLYTFIGNLEYDHQVFPMDPSQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTKSPSKRSRIEKKMDYIIYLLFTVLILISMISSIGFAIKTKLQTPDWWYLRPQETEYQYDPKNATLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDLQMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGIAYGVRSSEVELAAAKQMASDFEEHDSDLSNFPMPKNKAPGSWESNRTAEEIEIETIVTSKTNENKKPAIKGFNFEDNRLMNCNWLKEANSDVLLLFFRILAVCHTAIPELNEETGSFTYEAESPDEGAFLVAAREFGFEFCKRSQSSVVIRERISPSGQPVEREYKIFNLLDFTSKRKRMSVVARDEDGNILLMCKGADSIIFDRLSKNGKTYLEATTRHLNEYGESGLRTLALAYRKLDEEEYYAWNNEFQKAKTAVGSDREETLERLSDVMERELILVGATAIEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQCMKQICITTPNSESFTNDVKEAIKANILNQITNGSQMIKQEKDPHAAFALIIDGKTLTYTLEDDMKHHFLALAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTSFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVSSDVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLIIFFLNVIIFYDQAFRIEGQTADIAVVGTTMFTCIIWAVNLQIALTMNHFTWIQHLFVWGSVVTWYLFLVLYGMVSPYYSKSAYQILVEILGPAPLYWITTILVTVTCNLPYLTHISFQRCFNPMDHHIIQEIKYYKKDIEDQNMWSRERSKARHETKIGFTARVEAKIRQLKGRLQKKQSSIGALSPS 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0149 1224 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1167 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Sto9g0149 1224 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 1159 IPR032630 -
Sto9g0149 1224 Gene3D - 725 921 IPR023214 -
Sto9g0149 1224 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Sto9g0149 1224 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Sto9g0149 1224 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1219 - -
Sto9g0149 1224 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1150 IPR023298 -
Sto9g0149 1224 SUPERFAMILY HAD-like 410 925 IPR036412 -
Sto9g0149 1224 SFLD p-type atpase 405 932 IPR044492 -
Sto9g0149 1224 CDD P-type_ATPase_APLT_Dnf-like 60 1040 - -
Sto9g0149 1224 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1219 - -
Sto9g0149 1224 SUPERFAMILY Calcium ATPase, transduction domain A 148 286 IPR008250 -
Sto9g0149 1224 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Sto9g0149 1224 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 850 963 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto9g0149 1224 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 516 689 IPR023299 GO:0000166
Sto9g0149 1224 MobiDBLite consensus disorder prediction 468 487 - -
Sto9g0149 1224 Gene3D - 591 724 IPR023299 GO:0000166
Sto9g0149 1224 Gene3D - 434 469 IPR023299 GO:0000166
Sto9g0149 1224 Pfam Cation transport ATPase (P-type) 546 651 - -
Sto9g0149 1224 Gene3D - 116 288 - -
Sto9g0149 1224 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Sto9g0149 1224 SFLD Haloacid Dehalogenase 405 932 - -
Sto9g0149 1224 Gene3D - 419 433 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0149 Sto-Chr9 1346701 1352792 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0149 1 1222 Primary Pumps ATPases AT1G17500 74.980 0.0 1936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0149 K01530 - gmx:100819559 2130.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0149 9 1346701 1352792 Sto1g0434 1 3778044 3784855 CCT
Sto9g0149 9 1346701 1352792 Sto9g0149 9 1346701 1352792 ECH