Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0148 ATGGGTCGGGGGAGAATAAGGGCAAGGATCCGAAGGAGCAGTCTTTACACATTTGCTTGCCTTCGACCGAGAACTTCTGAGGAAGGGGCCCATCCACTATCAGGTCCTGGGTTCTCACGAACTGTATATTGCAACCAGCCTCTTCTCCATGAAAGGAAACCTCTATATTATTGCAAGAATGACATATCGactacaaaatataatattatcacATTTTTGCCCAAAGCTCTCTTCGAGCAGTTTCGACGGGTcgctaatatatattttcttttggctGCATGCCTCTCAGCCTCTCCAATTTCTCCTTTCACACCCGTGAGCATGATTGCTCCTTTGGCATTTGTTGTGGGGCTTAGTATGGCGAAGGAAGCATTGGAAGACTGGCGCAGATTCCTTCAGGATGTCAAAGTTAATCACCGGAAGGTTAGTGTCCATAAAGGCAATGGTGTTTTTGATTTAAAGATATGGCAGAACATAATGGTTGGAGATGTGGTAAAAGTAGAAAAGGATCAATTTTTTCCTGCCGACTTGCTTCTCTTGTCTTCAAGTTATGAGGATGGCATATGCTATGTGGAAACTATGAACTTAGATGGTGAAACAAACTTGAAAGTGAAAAGATCGTTGGAGGTTACTTTGCCGCTGGATAATGATGATGCCTTTAAGGATTTCAGAGGAACAATACAATGTGAAGATCCAAATCCCAGTCTTTACACATTTGTTGGAAACCTTGAGTATGATCATCAGGTTTTTCCTATGGATCCTAGTCAAATTCTCCTCCGAGATTCAAAGCTGAGAAACACTGATCATGTCTATGGGGTGGTCATATTCACTGGTCATGACAGCAAAGTTATGCAGAATTCTACAAAATCTCCTTCAAAAAGGAGTAGAATAGAAAAAAAGATGGATTATATCATATATCTTCTTTTTACAGTTCTTATTTTAATATCTATGATCAGTTCGATAGGATTTGCTATAAAGACCAAATTGCAAACCCCAGATTGGTGGTACTTAAGACCCCAGGAAACCGAGTACCAGTATGATCCCAACAATGCTACATTGGCTGGGATGAGTCATCTCATTACTGCACTCATTCTTTATGGATATTTGATACCTATATCACTTTATGTGTCAATTGAGGTTGTGAAGGTTCTACAAGCAACCTTCATCAACCAAGACTTACAAATGTATGATGAAGAAACTGGAACACCTGCTGATGCACGAACATCAAATTTGAATGAAGAGCTGGGTCAGGTAGATACTATCCTTTCTGATAAGACTGGCACTTTAACCTGCAATCAGATGGATTTTTTAAAGTGTTCCATTGCTGGTACCGCATATGGAGTGCGCTCTAGTGAAGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCTGATTTTGAGGAGCAGGAATCAGATCTCTCCAATTTCCCCATGCCTAAGAATAAAGCACGTGGTTCATGGGAAAGTAATAGAACATCTGAAGAAATTGAAATGGAGACCATTGTTACATCCAAGACTGATGAAAATAGAAAGCCTGCCATAAAGGGATTCAATTTTGAGGACAACCGCCTCATGAACTGCAACTGGTTAAAAGAGGCCAATTATGATGCCCTTTTGTTGTTTTTCCGGATATTAGCAGTTTGCCATACTGCAATTCCTGAGCTGAACGAGGAGACCGGCAACTTTACATATGAAGCTGAGTCACCTGATGAAGGCGCTTTTCTTGTAGCTGCAAGAGAATTTGGCTTTGAGTTTTGTAAAAGGAGTCAGTCAAGTGTTGTCATTCGTGAAAGAATTTCTCCTTCCGGACAACCAGTtgaaagGGAATACAAAATCCTTAATCTTCTGGACTTCACAAGCAAAAGAAAGCGGATGTCAGTGGTTGTACGTGATGAGGATGGCAACATTCTTCTTATGTGCAAAGGAGCAGACAGTATCATATTTGATCGATTATCAAAGAACGGAAAAACATATTTGGAGGCTACTACCAGACATTTAAATGAATATGCAGAATCTGGTTTGCGAACACTAGCCTTGGCTTATAGAAAGCTTGATGAGGAAGAGTATTCTGCTTGGAACAGTGAGTTCCAAAAAGCCAAAACAGCTGTTGGGTCTGACCGAGAGGAAACACTTGAGAGGTTATCAGATGTGATGGAAAGAGAGTTGATTCTTGTCGGTGCTACAGCTATAGAAGACAAACTGCAAAAAGGGGTAGGCTTTGTGCCCCAATGCATTGATAAACTTGCTCAAGCTGGTCTAAAGCTCTGGGTGTTAACTGGGGATAAGATGGAAACTGCAATCAACATTGGATTCGCTTGTAGTTTGCTTCGACAGGGCATGAAGCAGATATGTATAACTACTCCAAACTCAGAGTCATTTACCAATGATGGAAAAGAGGCCATCAAGGAGAGCATTTTGAACCAAATCACCAATGGCTCACAAATGATAAAGTTGGAGAAAGATCCACATGCTGCATTTGCGTTAATTATTGATGGTAAAACTTTGACATATACATTAGAAGATGATATGAAGCACCACTTTTTGGCATTGGCTGTTGAATGTGCATCTGTCATCTGCTGCCGTGTGTCTCCCAAGCAGAAAGCATTGGTAACAAGGTTAGTGAAAGAAGGAACAGGGAAGACCACGCTAGCAATAGGTGATGGTGCAAATGATGTGGGCATGATTCAAGAGGCAGATATTGGCGTTGGTATTAGTGGGGTTGAAGGTATGCAGGAAATGAAATTTACAACATCTTTTCAGGCAGTGATGGCTAGTGACTTTGCGATTGCCCAATTTCGGTTTTTGGAGCGTCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCGCAAATGATATGCTACTTTTTCTACAAAAATATAGCATTTGGCTTGACCATCTTCTATTTTGAGGCCTTTACGGGTTTCTCTGGGCAATCGGTTTATGATGACTGGTACATGATATTGTTTAATGTAGTTCTTACGTCATTGCCTGTCATCTCACTCGGGGTTTTTGAACAAGATGTTTCCTCAGACGTGTGCTTGCAGTTTCCTGCGCTGTACCAGCAAGGACCCAAAAATCTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGCAACGGTCTCTATTCTTCCCTTATTATCTTCTTCCTTAATGTCATCATCTTCTATGACCAAGCATTCCGCATCGAAGGCCAGACTGCTGACATGGCTGTTGTCGGTACCACAATGTTCACTTGCATCATTTGGGCTGTCAACCTTCAAATCGCACTGACGATGAACCATTTTACGTGGATCCAACACTTGTTTGTTTGGGGCAGTGTGGTCACTTGGTACCTATTTCTTGTACTATATGGCATGATTTCTCCATATTATTCCAAGAGTGCCTACCAAATTCTAGTTGAAATTCTTGGTCCTGCACCTCTATATTGGATAGCAACCATTTTAGTAACAGTGACGTGCAATCTTCCTTATCTTACCCACATATCCTTCCAAAGATGTTTTAATCCCATGGATCATCACATCATCCAAGAAATCAAGTACTACAAGAAggacattgaggatcaaaacaTGTGGACCCGGGAACGGTCTAAGGCTAGACACGAGACGAAGATCGGATTCACAGCAAGAGTGGAAGCTAAGATCAGGCAGTTGAAGGGTAGGCTGCAGAAGAAGCAATCATCTATTGGTGCTTTATCCCCATCATAA 3711 0.4085 MGRGRIRARIRRSSLYTFACLRPRTSEEGAHPLSGPGFSRTVYCNQPLLHERKPLYYCKNDISTTKYNIITFLPKALFEQFRRVANIYFLLAACLSASPISPFTPVSMIAPLAFVVGLSMAKEALEDWRRFLQDVKVNHRKVSVHKGNGVFDLKIWQNIMVGDVVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEVTLPLDNDDAFKDFRGTIQCEDPNPSLYTFVGNLEYDHQVFPMDPSQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTKSPSKRSRIEKKMDYIIYLLFTVLILISMISSIGFAIKTKLQTPDWWYLRPQETEYQYDPNNATLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDLQMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQMASDFEEQESDLSNFPMPKNKARGSWESNRTSEEIEMETIVTSKTDENRKPAIKGFNFEDNRLMNCNWLKEANYDALLLFFRILAVCHTAIPELNEETGNFTYEAESPDEGAFLVAAREFGFEFCKRSQSSVVIRERISPSGQPVEREYKILNLLDFTSKRKRMSVVVRDEDGNILLMCKGADSIIFDRLSKNGKTYLEATTRHLNEYAESGLRTLALAYRKLDEEEYSAWNSEFQKAKTAVGSDREETLERLSDVMERELILVGATAIEDKLQKGVGFVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMKQICITTPNSESFTNDGKEAIKESILNQITNGSQMIKLEKDPHAAFALIIDGKTLTYTLEDDMKHHFLALAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQEMKFTTSFQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVSSDVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLIIFFLNVIIFYDQAFRIEGQTADMAVVGTTMFTCIIWAVNLQIALTMNHFTWIQHLFVWGSVVTWYLFLVLYGMISPYYSKSAYQILVEILGPAPLYWIATILVTVTCNLPYLTHISFQRCFNPMDHHIIQEIKYYKKDIEDQNMWTRERSKARHETKIGFTARVEAKIRQLKGRLQKKQSSIGALSPS 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0148 1236 Gene3D - 589 703 IPR023299 GO:0000166
Sto9g0148 1236 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Sto9g0148 1236 Gene3D - 432 457 IPR023299 GO:0000166
Sto9g0148 1236 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 687 IPR023299 GO:0000166
Sto9g0148 1236 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Sto9g0148 1236 PRINTS P-type cation-transporting ATPase superfamily signature 884 903 - -
Sto9g0148 1236 Gene3D - 119 288 - -
Sto9g0148 1236 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1179 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Sto9g0148 1236 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Sto9g0148 1236 SFLD Haloacid Dehalogenase 405 944 - -
Sto9g0148 1236 Gene3D - 419 431 IPR023214 -
Sto9g0148 1236 MobiDBLite consensus disorder prediction 468 494 - -
Sto9g0148 1236 Pfam Phospholipid-translocating P-type ATPase C-terminal 921 1171 IPR032630 -
Sto9g0148 1236 SUPERFAMILY Calcium ATPase, transduction domain A 148 286 IPR008250 -
Sto9g0148 1236 CDD P-type_ATPase_APLT_Dnf-like 60 1052 - -
Sto9g0148 1236 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1231 - -
Sto9g0148 1236 Coils Coil 448 468 - -
Sto9g0148 1236 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1231 - -
Sto9g0148 1236 SUPERFAMILY HAD-like 410 937 IPR036412 -
Sto9g0148 1236 Pfam Cation transport ATPase (P-type) 546 651 - -
Sto9g0148 1236 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1162 IPR023298 -
Sto9g0148 1236 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 853 974 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto9g0148 1236 Gene3D - 720 933 IPR023214 -
Sto9g0148 1236 SFLD p-type atpase 405 944 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0148 Sto-Chr9 1337297 1343066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0148 1 1234 Primary Pumps ATPases AT1G17500 75.061 0.0 1942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0148 K01530 - gmx:100819559 2135.92