Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0147 ATGGAACCTCGAGTAGGAAACAAGTTTCGTCTTGGTCGCAAGATTGGTAGCGGATCGTTCGGGGAGATCTATCTTGGTACTAATATTCAGACTAACGAAGAAGTCGCAATTAAGCTCGAAAATGTCAAGACCAAGCACCCCCAGCTGTTATATGAATCAAAGTTGTATAAGATACTGCAAGGCGGAACTGGAATCCCAAATGTGAGATGGTTTGGTGTTGAAGGAGATTACAATGTGCTTGTGATGGATTTACTGGGGCCTAGTCTGGAGGATTTGTTCAATTTCTGTGGTCGGAAGTTGTCACTTAAAACTGTTCTCATGCTTGCTGACCAGATGATAAATCGAGTTGAATTTgttcattccaaatcatttttACATCGTGACATCAAGCCAGACAACTTTCTAATGGGTCTAGGAAGGCGTGCAAACCAAGTGTACATTATTGACTTTGGTCTTGCAAAGAAATACAGAGACACCTCTACCCATCAGCATATTCCCTACAGAGAGAATAAGAATTTGACTGGAACTGCTAGATATGCCAGTATGAATACTCATCTTGGAATAGAGCAAAGCCGTCGGGATGACTTAGAGTCACTTGGATATGTTCTCATGTACTTTTTGAGAGGAAGTCTTCCTTGGCAGGGACTGAAAGCAGGTAATAAGAAGCAGAAGTATGAGAAGATCAGCGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTCTGTCGTGGATTTCCCTCAGAATTCGCATCATACTTCCATTACTGTCGGTCTCTGCGTTTTGATGATAAGCCAGATTATGCTTATCTGAAAAGACTTTTCCGTGATCTTTTCATCCGTGAAGGATTCCAGTTTGATTACGTCTTTGATTGGACCATCTTGAAATATCAGCAATCCCAAATTACTCCTCCTGCCCGTGCTATTGCTCCTGGTGCTGGACCAAGTTCTGGCTTGCCCCCAGCTGTTGCAAATGCTGATAGACATTCAGGTGGGGAAGATGGTAGGCACCCTGGTTGGTCTTCATCAGATCCTACTCGTAGGAGAAATGCTATGGCTAATGATGGTGTCTTATCTAGACAAAAAGCCCCAGTTGCAAGTGAATCAAATGCATCAAAAGATGTAATGTCATCAAGTTCTAACTTCTTCCGGACAAGTGGAGCTTCAAGGCGAGGTGTTGTCTCTGGCAGTCGGGATGCAGTTGTTGGCAGTGAGAGCGAGAGCTCTCGCCCTCTTGCCAGTGATTCAAGTTCAGGAGCAGTCCGTAAAATCTCAGGCGCTCAAAGAAGTTCACCCGTCATATCAGCTGAGCAGAGCAGAACTTCCGGCCGAAGCTCATCAAACATCAAGAATTTTGATTCAACTCTCAGAGGCATCGAGAGCCTGCATTTCAACGACGAAAGGGTTCAGTATTAG 1410 0.4362 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYKILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCGRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYEKISEKKVSTSIESLCRGFPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQITPPARAIAPGAGPSSGLPPAVANADRHSGGEDGRHPGWSSSDPTRRRNAMANDGVLSRQKAPVASESNASKDVMSSSSNFFRTSGASRRGVVSGSRDAVVGSESESSRPLASDSSSGAVRKISGAQRSSPVISAEQSRTSGRSSSNIKNFDSTLRGIESLHFNDERVQY 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0147 469 MobiDBLite consensus disorder prediction 327 341 - -
Sto9g0147 469 MobiDBLite consensus disorder prediction 304 449 - -
Sto9g0147 469 MobiDBLite consensus disorder prediction 399 449 - -
Sto9g0147 469 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0147 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Sto9g0147 469 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 451 IPR030509 GO:0004672|GO:0005524
Sto9g0147 469 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0147 469 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Sto9g0147 469 Gene3D Transferase(Phosphotransferase) domain 1 1 307 - -
Sto9g0147 469 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Sto9g0147 469 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0147 469 PANTHER CASEIN KINASE-RELATED 1 451 - -
Sto9g0147 469 CDD STKc_CK1_delta_epsilon 8 282 - -
Sto9g0147 469 MobiDBLite consensus disorder prediction 361 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0147 Sto-Chr9 1331578 1335914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0147 8 213 MAP Kinase Kinase Kinase AT3G06030 27.727 1.38e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Sto9g0147 Pkinase 3.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0147 K02218 - gmx:100778165 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0147 9 1331578 1335914 Sto1g0435 1 3789338 3794103 CCT