Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0139 ATGAGTTTGGGTGCGGCCGAGGAAGAATCGAGTCAAGAGATTCATCTCCCGGCCGATGTTGATTGGCAAATGCTTGATAAATCCAAGTTTTTCTTCCTCGGTTCTGCCCTTTTCTCAGGGGTTTCGGCGGCTCTGTACCCTGTGGTAGTGTTGAAAACCCGGAAGCAAGTAGCTCAATCCCAAGTTTCCTGTGTCAAAACTGCGTTTTCACTGGTTAGGCATGAGGGGTTTCGAGCATTGTACAGAGGATTTGGTACTTCTTTGATGGGTACAATCCCAGCTCGAGCACTGTACATGGCTGCCCTAGAGGTAACCAAGAGTAATGTAGGGACTGCTACAGTTAGGATGGGACTTGCAGAACCAACTGCAGCTGCAATTGCCAATGCAGCAGCAGGTTTAAATGCAGCCATGGCAGCTCAATTGATATGGACTCCGATTGATGTTGTGAGTCAGAGGTTGATGGTTCAAGCTAATTCAGCTCGCCAATATGTCAATGGGATTGATGCCTTCAGGAAAATTCTTAACACTGATGGTCCCAGAGGCTTGTATAGAGGATTTGGGATATCCATTTTGACTTATGCACCTTCAAATGCTGTTTGGTGGGCTACCTACTCTGTTGCACAGAGGCTAATTTGGGGTGGAGTTGGGTACTACCTATGCAAGAAAGATGGTGAAAGCAACAATGCTACAACAGCTAACACATCACTGAGGCCAGATTCAAAAACAGTAATGGCAGTTCAGGGAGTTAGTGCAGCAATGGCTGGTGGTATGTCTGCTTTAATCACCATGCCTCTTGATACAATCAAAACAAGACTTCAGGTCTTAGATGGTGATGAAAATGGTCGTCGTGGACCAACAGTTATGCAGACAATGAGGAACTTGGTTAGGGAAGGTGGTTGGATGGCTTGTTACAGAGGGTTGGGACCTAGGTGGGCTTCTATGTCAGTGTCTGCAACGACAATGATCACTACCTATGAGTTCCTAAAACGGCTTTCCACCAAAAACCAAGAGGTTTTGACATGA 1023 0.4624 MSLGAAEEESSQEIHLPADVDWQMLDKSKFFFLGSALFSGVSAALYPVVVLKTRKQVAQSQVSCVKTAFSLVRHEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVRMGLAEPTAAAIANAAAGLNAAMAAQLIWTPIDVVSQRLMVQANSARQYVNGIDAFRKILNTDGPRGLYRGFGISILTYAPSNAVWWATYSVAQRLIWGGVGYYLCKKDGESNNATTANTSLRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTMRNLVREGGWMACYRGLGPRWASMSVSATTMITTYEFLKRLSTKNQEVLT 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0139 340 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Sto9g0139 340 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085
Sto9g0139 340 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Sto9g0139 340 PRINTS Mitochondrial carrier protein signature 251 273 IPR002067 GO:0055085
Sto9g0139 340 Gene3D Mitochondrial carrier domain 30 338 IPR023395 -
Sto9g0139 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 242 331 IPR018108 -
Sto9g0139 340 SUPERFAMILY Mitochondrial carrier 23 328 IPR023395 -
Sto9g0139 340 Pfam Mitochondrial carrier protein 125 211 IPR018108 -
Sto9g0139 340 Pfam Mitochondrial carrier protein 40 108 IPR018108 -
Sto9g0139 340 Pfam Mitochondrial carrier protein 245 335 IPR018108 -
Sto9g0139 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 337 - -
Sto9g0139 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 210 IPR018108 -
Sto9g0139 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 337 - -
Sto9g0139 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0139 Sto-Chr9 1279292 1280344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0139 1 337 Chloroplast and Mitochondria Gene Families AT1G72820 75.723 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0139 K15121 - gmx:100784616 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0139 9 1279292 1280344 Sto1g0470 1 4172176 4173225 ECH
Sto9g0139 9 1279292 1280344 Sto9g0139 9 1279292 1280344 ECH