Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0135 ATGAATTTGCAACAAGTTGGGCAGTCTAGATCCTCTAATGGATATGGCCGTCGAAAATTCGATAGAGAAGGAGCAGCTAAGTTAGAGAACAAGATCCCATCTGGGAAGTTAAATTCCAACAGATTGGCAAGTGCAGTGACTGGCACTATAAGTGGTAGTTTTGAGGGTCCTTCACGTGATCGACTAGTATATGTAACAACTTGTCTTATTGGGCAGCAGGTTGAAGTCCAGGTGAAAAATGGATCTGTATACTCTGGGATATTTCACGCAACAAATACTGAGAAAGATTTTGGAATCATTTTGAAGATGGCTCGCATGACGAAGGATGGTTCTTTGCGAGGGCAGAAGTCTGGTGTAGAATCAGTTAGCAAGGCTCCAGATAAGATTTTAATTATACCTGCCAAAGAACTTGTACAAGTCATAGCGAAGGGCGTTGCTGTTACTAGGGATGGCCTACATAGGGAAGGTCACCATGAAATGCACCGGGAAATCATGGTTGATTCAGTAATATCACAATCCCGTCATGTTGACATAGAGAGAGAACTTCAACCTTGGGTTCCTGATGAAGATGATCCACAATGCCCTGATCTGGAAAATATCTTTGATGGTCCATGGAATAGGGGCTGggatcaatttgaaacaaaCGAAACGTTGTTTGGTGTAAAAAGCACGTTCAATGAGGACCTTTATACAACAAAGCTTCAGAAAGGACCTCAGATGAGAGAGTTGGAAAAACAAGCTTTAAGAATAGCAAGAGAAATTGAGGGTGAGGATACCCAAGATCTTCATCTCGCGGAGGAAAGGGGCTTTTATCTACATAAGAATTTTGATATTGATGAAGAGACCAGATATTCTTCCGTCTACAGGGATAAAGGAGTTGATGACAGTGGATATGATGAAAATGAGGACATAATGTTGGATTCGCACAATTCTGAAACTTTTGGTAGTACATTAGCTTCAGTCATTGGGGGATCTGGTGAATTAACTGGTGGAAAAGGCAATGATGGAGCTAGAACATCATCTAATTCCTCTGCTATGGATTTCCCACAATCATCTCAGTCAAGTACTGGTGTGGATTTAAGCCGTTCTGCTTCTCATGATCATGCTAAGCAATTAGCATCTGAACTTTCTGCCAAAAGCGACCCTACTTTGGATGCTGAAATCAGGATTCAGGAGAACTCACTTAGTGATCTGCATGGAGCCAATGGCAATAGCAAGGAAGAAAATCAGATACAAGCTGAGGATGTTCAACTGTCAAAATCTGAGGATTTACAGCCATCGGTCAACCCGAAGAAAGATGGCCCTGATACAGGGGGATTATGTCCAAATGCCACCTGTTATGCACCATCATCTAATATTTCATCGAAGACTCCTGAAAAGACAGGTTCACCTGGAGAAACAAATTCTTTAAACTCCCTTGGAAGGACTGTTAGTTCTACATCAACTGGTTCAGATTGTGCTAGGGGTGTTACAGCATCTTCTGGCCCTGGTCTATCTCCAAGTTCTTCGGTTGGTTCATTATCTTCTGAAAAATCAACTCTTAATCCCAATGCAAAGGAGTTCAAGCTAAACCCTAATGCAAAGAGTTTCGTTCCTACCCATACACCTGTTAGGCCTCCCTCCCCCGTATCTGATGGCTCCTTCTATTTCCCAACTAATGTAACTTCTGTGCCACATATGCCAGCCATGCCCATGGATATGGGAATGGGACCTGCGTTTGCTGGACCACAACCTGTCCTTTATAATCCACAGGTAGCACAAATGCCATCACATGCATATTATCATCCCAATGGACCACAGTATGGGCAACTTCTTGGTCATCCAAGGCAAGTGTTGTACATGCCAGGTTATCTTCCTGAAACGCCATATAAGGGACGGGATTACTAA 1887 0.425 MNLQQVGQSRSSNGYGRRKFDREGAAKLENKIPSGKLNSNRLASAVTGTISGSFEGPSRDRLVYVTTCLIGQQVEVQVKNGSVYSGIFHATNTEKDFGIILKMARMTKDGSLRGQKSGVESVSKAPDKILIIPAKELVQVIAKGVAVTRDGLHREGHHEMHREIMVDSVISQSRHVDIERELQPWVPDEDDPQCPDLENIFDGPWNRGWDQFETNETLFGVKSTFNEDLYTTKLQKGPQMRELEKQALRIAREIEGEDTQDLHLAEERGFYLHKNFDIDEETRYSSVYRDKGVDDSGYDENEDIMLDSHNSETFGSTLASVIGGSGELTGGKGNDGARTSSNSSAMDFPQSSQSSTGVDLSRSASHDHAKQLASELSAKSDPTLDAEIRIQENSLSDLHGANGNSKEENQIQAEDVQLSKSEDLQPSVNPKKDGPDTGGLCPNATCYAPSSNISSKTPEKTGSPGETNSLNSLGRTVSSTSTGSDCARGVTASSGPGLSPSSSVGSLSSEKSTLNPNAKEFKLNPNAKSFVPTHTPVRPPSPVSDGSFYFPTNVTSVPHMPAMPMDMGMGPAFAGPQPVLYNPQVAQMPSHAYYHPNGPQYGQLLGHPRQVLYMPGYLPETPYKGRDY 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0135 628 MobiDBLite consensus disorder prediction 396 539 - -
Sto9g0135 628 MobiDBLite consensus disorder prediction 1 20 - -
Sto9g0135 628 MobiDBLite consensus disorder prediction 334 362 - -
Sto9g0135 628 Gene3D - 66 136 - -
Sto9g0135 628 SMART LsmAD_2 219 290 IPR009604 -
Sto9g0135 628 MobiDBLite consensus disorder prediction 325 380 - -
Sto9g0135 628 Coils Coil 240 260 - -
Sto9g0135 628 PANTHER ATAXIN-2 HOMOLOG 4 617 - -
Sto9g0135 628 PANTHER ATAXIN 2-RELATED 4 617 IPR045117 GO:0003723
Sto9g0135 628 Pfam Ataxin-2 C-terminal region 510 521 IPR009818 -
Sto9g0135 628 Pfam Ataxin 2 SM domain 59 143 IPR025852 -
Sto9g0135 628 MobiDBLite consensus disorder prediction 396 425 - -
Sto9g0135 628 MobiDBLite consensus disorder prediction 444 522 - -
Sto9g0135 628 Pfam LsmAD domain 219 289 IPR009604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0135 Sto-Chr9 1256093 1262039 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0135 - - gmx:100782491 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0135 9 1256093 1262039 Sto1g0472 1 4186580 4205578 CCT
Sto9g0135 9 1256093 1262039 Sto9g0135 9 1256093 1262039 ECH