Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0127 ATGCGAGAAGTTTCTCTCTCCAATTCATCCCCCCAAAAAGCTGCTTGTACAATCACTCACGCTCACGGACGCCTCCAACTCGGCCCTAGTCTGAATCGGTCACACTCAGTGAAGATTTTGACGGTTGCTGCAGCAGCTACTGAGTGGACTCGCTCATCAGCTACTTTTTCTGGTTCTGACTCTATGAATGCCTTTATTCTTATTGGTTTGTGTACTGGAGGTGCATGCGGATTCTCCATGGAAATATTGGCTGGAATTGAGGATAATGATGAGGGGAAGCTTGAAGACAGTGGGGTTGATAGAAGTAGCTCTGGTTTGTCTTCACCAAAGCAGATCGCCAACCCAGTTGTGTACAAGCTTGTGCGGGTTGAAGGTGATGGGAGGTTAGTGCCTGCAACAGATGATGAAGTAATTGAGGTGGAGGATTTTCTTGAGTATGACCAGATTGAAATGGGTGTTGATGCAGACACTGGGCACAGTGAAGGATGCACTTCGATTGACAGGTCTTCCTCTGGGAAGCTTCAATTTGAGTGCTCAGAAGGTGTCTCACAACCAGACACTGCAGAGGCAGATCTGGGGAAATTAAATGCCCGGCTACAGATGTTGCAAAAGGTCAAACAGGAGGAGAAGCTTCGTTTGGCTTGTGGATCACCTGGACTTTCTTGTGTGAATTTTGACGGCCAGTGTTCTGATGCTGAATTGCTTATCATGGATGGGACTATTCAGTCTGTTACTCCCTTTGAGGAAATTGTCCCTTCTTTAGCACCGGCTTTAAACAATAGTCATAGTAATCAATTGCAAACTATCGGTGAGTGTTCCAGACCTTCAGAAGGACACTTAGAAAGTGGATCATCTACTTCTGCTGTCTATTCTACTTTGAAGCCTGATTTTTTGATCTTAGAAGGAGAAATATGCTTGGACAAGCTATCAATCAGAGAACTTCATGAACTGTTTAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGCTGAAGAGGAGGATTGCCATGAGTTTAACTAACTCATGTGATGTTTCAGCAACAACTTTCGTAGTTCAAGATAacagaataattaaaaaatatgaggaAGATAGTCATGGTAATGTGAATGCTGTACTCTTTGATGATACTAGTGCTGGAGAAGAAGATATCAACTGTAAGGATTCATCAACTGCTGAGGGTACTGGTtttgaagaaaatcaagttgtttTTGGAAAGACACTGAGGAATCATTTTGTGGAACATGATTTGGGTTGTGAGAATCTTCAGATAGAACAAAGAGCTGCCAAAAGAATCCGGAAGCCCACTAAGAGATATATTGAAGAGCTCTCTGAAAATGAATCTAGAGACCCCAACCCTAGGTTGttgaattcaaataaaaatatgggACTTGGACATGTCCCTCCAAACTCATATGTTGGGCCTGCTAGGAATGTTTTTTCAGAGGGGAGAACAGTTACGacaaggtttgactctcttGGAGGTTCTGGGGTCTACATACCTTGTGTATGTCGGGTTCGAAGAAGTCGACCAAGGAAAAATATCATGCCTCTTATGAACTTCCATCCAAGTGGCAGGATGGTGGAGGATGCAAAAGTAAGTAGCAAGGCCCTTGGAGAGCATGGCTCTCAGGCTGATAATGAGAGTTGGGACAAAGTCTTGAAATCGAGATTAGCACCTGCAAAATTTCAGCAGCAATCTACTGTTGAGCTTGGGAAATATAAACAGTGTCCAGTAATGGACACAATTGAACTACAAGAAGAATTGAGAGCCAGTAAGGCAGATCTACCTAGCTATACTTCAGATGGCAATATAGTGGCTGTTCCCACTGCTAAAGGTGGAATGAGAAGGAAGCATCATCGAGCATGGACTCTTGTGGAGGTAATGAAATTGGTTGAAGGTGTATCACAGTGTGGAGCAGGGCGGTGGTCTGAGATCAAACGACTCGCATTTGCATCTTATTCATATCGTACATCTGTTGATCTCAAGGATAAGTGGAGGAATTTACTTAAAGCTAGCTTTGCGCATACACCTGCCGATGAAGGGATGAACTCACGGAAGCATGGTACAGTTGCTATTCCCGAGCCGATTTTATTACGAGTAAGAGAGCTTGCAGAGATGAATTCTCAGGTACCTACAAATTTTAGCTCAAGCAAGCCAACAGGCGGTGCAAGGATTGCACAAGATGATAGATCAGGATACTTGTAG 2217 0.4244 MREVSLSNSSPQKAACTITHAHGRLQLGPSLNRSHSVKILTVAAAATEWTRSSATFSGSDSMNAFILIGLCTGGACGFSMEILAGIEDNDEGKLEDSGVDRSSSGLSSPKQIANPVVYKLVRVEGDGRLVPATDDEVIEVEDFLEYDQIEMGVDADTGHSEGCTSIDRSSSGKLQFECSEGVSQPDTAEADLGKLNARLQMLQKVKQEEKLRLACGSPGLSCVNFDGQCSDAELLIMDGTIQSVTPFEEIVPSLAPALNNSHSNQLQTIGECSRPSEGHLESGSSTSAVYSTLKPDFLILEGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFVVQDNRIIKKYEEDSHGNVNAVLFDDTSAGEEDINCKDSSTAEGTGFEENQVVFGKTLRNHFVEHDLGCENLQIEQRAAKRIRKPTKRYIEELSENESRDPNPRLLNSNKNMGLGHVPPNSYVGPARNVFSEGRTVTTRFDSLGGSGVYIPCVCRVRRSRPRKNIMPLMNFHPSGRMVEDAKVSSKALGEHGSQADNESWDKVLKSRLAPAKFQQQSTVELGKYKQCPVMDTIELQEELRASKADLPSYTSDGNIVAVPTAKGGMRRKHHRAWTLVEVMKLVEGVSQCGAGRWSEIKRLAFASYSYRTSVDLKDKWRNLLKASFAHTPADEGMNSRKHGTVAIPEPILLRVRELAEMNSQVPTNFSSSKPTGGARIAQDDRSGYL 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0127 738 Coils Coil 192 212 - -
Sto9g0127 738 ProSiteProfiles Myb-like domain profile. 626 673 IPR001005 -
Sto9g0127 738 SMART sant 622 675 IPR001005 -
Sto9g0127 738 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 618 677 IPR017930 -
Sto9g0127 738 SUPERFAMILY Homeodomain-like 624 683 IPR009057 -
Sto9g0127 738 MobiDBLite consensus disorder prediction 713 738 - -
Sto9g0127 738 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 80 738 - -
Sto9g0127 738 CDD SANT_TRF 624 674 - -
Sto9g0127 738 PANTHER TRF-LIKE 3 80 738 - -
Sto9g0127 738 Gene3D - 613 720 - -
Sto9g0127 738 Pfam Myb-like DNA-binding domain 625 673 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0127 Sto-Chr9 1178531 1190906 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto9g0127 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0127 - - gmx:100782501 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0127 9 1178531 1190906 Sto9g0127 9 1178531 1190906 ECH