Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0118 ATGGGAAGAAGACGATCCTGCAAGAACGAGATCAACAAAGGGACTTGGactaaagaagaagatgaaattcTCTTCACTTATGTCACTCTTCATGGAGAACGAAAATGGCGAGAGGTCGCTCAATTTTCAGgtTTGAAGAGGTGTGCGAAAAGTTGTAGGTATCGatatttgaattatttgaaaCCTGGGTTGAAGAGAGGTGACATTTCTGAGGATGAGCAAGATTTGATCATCGAACTCCAGCATCAACTTGAGGAGGATGATGAGGATGACAATAATATTGATGATTTTCTCCTCATTGATCAAAttggtaataataataataataatgtgaatGATGATAAGAAGAAGGTGGAGGATGATGAGAAGTTGATTAATAGACATGGATTGAAAGGTGCTTGGTCAAAGAAAGAAGATGAAATTCTCTCCAACTATGTTGCTCTTCATGGAGAAGGCCAATGGAACAAGGTTGCCCAAAGGACAGGACGAACTGACAGCGAAATCAAGAATCACTGGCATGCATATTTGTCTAAGAAATTAGATGATGAAGATGCCAAATCATCACTTAATAAAGATTATGATCACCAAAAATCTGAAGATAATCATATTGATGAAGAACAAATGAAATATGTATTCACACCTCAAGTTGATGATTTGCCAGCAAAAAGGAGCAATTTGGaggacaataataatattaataatgtttGGGAGTTTTCTGAATTTGATTTTGATCTTAATTACACCACAGATCCCACCACCAATAATTCCTCCTTATTCGAAATAGAGTATGACACTGCATTTCTGGATAGTTATCTGTTCAATTTTTTCCAAAACGATCAAATGAATGCAGATGTTCATCATCATGAGTTGATTTCCAAGACACCAAAATTTGATGAAGACCACAAGGACGTGTTTGCCTCTTCATTTAATATTGTGCATGGTCATTGTGAAGCAGAAGAAGCTGATATTATGGATTTCTGGACGTCAAGTGATGAATTTCGTTTCACGGACTGGtag 1017 0.3471 MGRRRSCKNEINKGTWTKEEDEILFTYVTLHGERKWREVAQFSGLKRCAKSCRYRYLNYLKPGLKRGDISEDEQDLIIELQHQLEEDDEDDNNIDDFLLIDQIGNNNNNNVNDDKKKVEDDEKLINRHGLKGAWSKKEDEILSNYVALHGEGQWNKVAQRTGRTDSEIKNHWHAYLSKKLDDEDAKSSLNKDYDHQKSEDNHIDEEQMKYVFTPQVDDLPAKRSNLEDNNNINNVWEFSEFDFDLNYTTDPTTNNSSLFEIEYDTAFLDSYLFNFFQNDQMNADVHHHELISKTPKFDEDHKDVFASSFNIVHGHCEAEEADIMDFWTSSDEFRFTDW 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0118 338 SUPERFAMILY Homeodomain-like 128 182 IPR009057 -
Sto9g0118 338 SUPERFAMILY Homeodomain-like 14 84 IPR009057 -
Sto9g0118 338 ProSiteProfiles Myb-like domain profile. 131 176 IPR001005 -
Sto9g0118 338 PANTHER MYB TRANSCRIPTION FACTOR 1 82 - -
Sto9g0118 338 PANTHER MYB TRANSCRIPTION FACTOR 162 306 - -
Sto9g0118 338 PANTHER MYB TRANSCRIPTION FACTOR 131 162 - -
Sto9g0118 338 Gene3D - 130 181 - -
Sto9g0118 338 CDD SANT 15 60 IPR001005 -
Sto9g0118 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 180 IPR017930 -
Sto9g0118 338 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 162 306 - -
Sto9g0118 338 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 82 - -
Sto9g0118 338 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 131 162 - -
Sto9g0118 338 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Sto9g0118 338 Gene3D - 13 65 - -
Sto9g0118 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Sto9g0118 338 SMART sant 12 62 IPR001005 -
Sto9g0118 338 SMART sant 130 178 IPR001005 -
Sto9g0118 338 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Sto9g0118 338 Pfam Myb-like DNA-binding domain 131 176 IPR001005 -
Sto9g0118 338 CDD SANT 133 176 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0118 Sto-Chr9 1084512 1087189 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0118 1 84 MYB Transcription Factor Family AT1G06180 51.765 2.74e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto9g0118 Myb_DNA-binding 1.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0118 K09422 - gmx:547568 120.938