Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0114 atgggtagaAGACGATCTTGTAGCAACGAAATAAAGAAAGGAAGTTGGtcgaaagaagaagatgaaattcTATTGAACTATGTCACTCTTCATGGACAAGGCAAATGGCCAGTGGTTGCTCAATCCTCAGGGTTGAAAAGAAGTGCAAAAAGTTGTCGATATCGATATTTGAATTACTTGAAACCCGACATAAAGAGAGGTGACATCTCTAAGCATGAAGAAGAATTGATCATGAGATTTCATCGTCAACTTGGTAACAGGTGGGCTTTGATTTCTAAAAAGTTACCGGGAAGAACAGATATCGAAATCAAGAACTacttcaaaatttatttgtcCCAAAATCCAAGTCATAAAGTTGGAGAGAAAAAGACCAAAGTTTTGGAGAAGAATGTGGATGTTGATGATGAAATTGTGAAAGAAGAGTTGAACAGGTGGAGTTTGATTGCGAAGAAGCTACCAGGAAGAACAGATAGTGAAATCAAGAACCATTGGCATGCCTACTTGTCTAAGAAATTGCATGAAAACTCCAAATCATCATCTCCAGAAGTTGCTTTCCCAGAAACAAAAGCCAACACCAAAACTAATTTGGATGACAATATTATTATGGGATCGCTTCAAGCTGATCATAACACAAATACAATAATATCATTTGGTTTACTTCCAGCACTGGATGAATTACTTCCTGGCGTTGATCAGAGATTCTGTGTGAGTCATTTGTACAACAACTTCATAAGGAAATTTCCTAGTTTACACTTGAAAAACATTATGGGGAATGCACGAAGGCTACTTACCCACAAGAATGGGAGAGTTCGATGCTGA 819 0.3578 MGRRRSCSNEIKKGSWSKEEDEILLNYVTLHGQGKWPVVAQSSGLKRSAKSCRYRYLNYLKPDIKRGDISKHEEELIMRFHRQLGNRWALISKKLPGRTDIEIKNYFKIYLSQNPSHKVGEKKTKVLEKNVDVDDEIVKEELNRWSLIAKKLPGRTDSEIKNHWHAYLSKKLHENSKSSSPEVAFPETKANTKTNLDDNIIMGSLQADHNTNTIISFGLLPALDELLPGVDQRFCVSHLYNNFIRKFPSLHLKNIMGNARRLLTHKNGRVRC 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0114 272 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Sto9g0114 272 Gene3D - 10 66 - -
Sto9g0114 272 SUPERFAMILY Homeodomain-like 143 175 IPR009057 -
Sto9g0114 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Sto9g0114 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 143 172 IPR017930 -
Sto9g0114 272 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Sto9g0114 272 CDD SANT 15 60 IPR001005 -
Sto9g0114 272 ProSiteProfiles Myb-like domain profile. 136 168 IPR001005 -
Sto9g0114 272 Gene3D - 135 199 - -
Sto9g0114 272 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 143 187 - -
Sto9g0114 272 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 3 122 - -
Sto9g0114 272 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Sto9g0114 272 Gene3D - 68 129 - -
Sto9g0114 272 SMART sant 65 113 IPR001005 -
Sto9g0114 272 SMART sant 122 170 IPR001005 -
Sto9g0114 272 SMART sant 12 62 IPR001005 -
Sto9g0114 272 CDD SANT 143 168 IPR001005 -
Sto9g0114 272 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Sto9g0114 272 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Sto9g0114 272 Pfam Myb-like DNA-binding domain 138 168 IPR001005 -
Sto9g0114 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Sto9g0114 272 CDD SANT 70 111 IPR001005 -
Sto9g0114 272 PANTHER TRANSCRIPTION REPRESSOR MYB6-LIKE 3 122 - -
Sto9g0114 272 PANTHER TRANSCRIPTION REPRESSOR MYB6-LIKE 143 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0114 Sto-Chr9 1031912 1035617 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0114 63 184 MYB Transcription Factor Family AT5G40330 32.258 1.19e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto9g0114 Myb_DNA-binding 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0114 K09422 - gmx:547568 162.54