Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0113 ATGAACAAAGGGACTTGGACTAAAGAAGAAGATCAAGTTCTCTTCAATTATGTCACTCTTCATGGAGAACGAAAATGGCGAGAGGTCGCTCAATTTTCAGgTTTGAAGAGATGTGCAAAAAGTTGTAGGTATCGgtatttgaattatttgaaaCCTGGGTTAAAGAGAGGTGACATTTCTGAGGATGAGCAAGATTTGATTCTAAAACTCCATCATCAACTTGGTAACagGTGGGCGTTGATTGCTAAGAGGCTGCCAGGAAGAACAGATATTGAAATCAAGAACTACTGGAAAATTTATTTGTCCAAGAAATTAAATCATCAACAACATAAAcccaatattaatattaatattattgatcaaattggtaataataataataataataataataataataataataataatgtgaatgatgagaagaagaaggtggAGGATGATGAGAAGTTGATTAATAGACATGGATTGAAAGGTGCTTGGTCAAAGAAAGAAGATGAAATTCTCTCCGACTATGTTGCTCTTCATGGAGAAGGCCAATGGAACAAGGTTGCCCAAAGGACAGCTAAAAAGCTTCCAGGTCGAACAGACAGCGAAATCAAGAATCACTGGCATGCATATTTGTCTAAGAAATTAGATGATGAAGATGCCAAATCATCACTTAATAAAGATTATGATCACCAAAAATCTGAAGATAATCATATTGATGAAGAACAAATGAAATATGTATTCACACCTCAAGTTGATGATTTAGCAGCAAAAAGGAGCAATTTGGaggacaataataatattaataatatttgggAGTTTTCTGAACTTGATTTTGATCTTAATTACACCACAGATCCTACCACCAATAATTCCTCCTTATTCGAAATAGAGTATGACACTGCATTTCTGGATAGTTATCTGTTCAATTTTTTCCAGAATGATCAAATGAATGCAGATGTTCATCATCATGAGTTGATTTCCAAGACACCAAAATTTGATGAAGACCACAAGGACGTGTTTGCCTCTTCATTTAATATTGTGCATGGTCATTGTGAAGCAGAAGCTGATATTATGGATTTCTGGACGTCAAGTGATGAATTTCGTTTCACGGACTGGtag 1110 0.3171 MNKGTWTKEEDQVLFNYVTLHGERKWREVAQFSGLKRCAKSCRYRYLNYLKPGLKRGDISEDEQDLILKLHHQLGNRWALIAKRLPGRTDIEIKNYWKIYLSKKLNHQQHKPNININIIDQIGNNNNNNNNNNNNNNVNDEKKKVEDDEKLINRHGLKGAWSKKEDEILSDYVALHGEGQWNKVAQRTAKKLPGRTDSEIKNHWHAYLSKKLDDEDAKSSLNKDYDHQKSEDNHIDEEQMKYVFTPQVDDLAAKRSNLEDNNNINNIWEFSELDFDLNYTTDPTTNNSSLFEIEYDTAFLDSYLFNFFQNDQMNADVHHHELISKTPKFDEDHKDVFASSFNIVHGHCEAEADIMDFWTSSDEFRFTDW 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0113 369 Pfam Myb-like DNA-binding domain 56 101 IPR001005 -
Sto9g0113 369 Pfam Myb-like DNA-binding domain 158 208 IPR001005 -
Sto9g0113 369 Pfam Myb-like DNA-binding domain 3 50 IPR001005 -
Sto9g0113 369 SUPERFAMILY Homeodomain-like 155 214 IPR009057 -
Sto9g0113 369 MobiDBLite consensus disorder prediction 125 147 - -
Sto9g0113 369 Gene3D - 157 213 - -
Sto9g0113 369 SMART sant 157 210 IPR001005 -
Sto9g0113 369 SMART sant 55 103 IPR001005 -
Sto9g0113 369 SMART sant 2 52 IPR001005 -
Sto9g0113 369 CDD SANT 60 101 IPR001005 -
Sto9g0113 369 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Sto9g0113 369 Gene3D - 3 55 - -
Sto9g0113 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 158 212 IPR017930 -
Sto9g0113 369 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Sto9g0113 369 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Sto9g0113 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Sto9g0113 369 Gene3D - 58 117 - -
Sto9g0113 369 Coils Coil 128 148 - -
Sto9g0113 369 CDD SANT 160 208 IPR001005 -
Sto9g0113 369 PANTHER TRANSCRIPTION REPRESSOR MYB6-LIKE 189 292 - -
Sto9g0113 369 PANTHER TRANSCRIPTION REPRESSOR MYB6-LIKE 158 188 - -
Sto9g0113 369 PANTHER TRANSCRIPTION REPRESSOR MYB6-LIKE 1 150 - -
Sto9g0113 369 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 189 292 - -
Sto9g0113 369 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 150 - -
Sto9g0113 369 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 158 188 - -
Sto9g0113 369 SUPERFAMILY Homeodomain-like 2 97 IPR009057 -
Sto9g0113 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Sto9g0113 369 CDD SANT 5 50 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0113 Sto-Chr9 1026045 1028860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0113 137 265 MYB Transcription Factor Family AT3G13540 23.118 6.63e-07 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto9g0113 Myb_DNA-binding 3.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0113 K09422 - gmx:100780809 165.622