Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0110 ATGCGGATGAAGAAAACATTTCCATTGCGAGGATCACGTAGGAGAATGGATGGCATAAGTTTAAAGAGATGTGCAAAGAGTTGCAGATATCggtatttaaattatttgagaCCTGGAATCAAGAGAGGTGACATTtctgaagatgaagaaaatttAATCATAGCACTCCATCGTCAACTTGGTAACAGGTGGTCACTGATAGCCAAAAGGTTACCCGGAAGATCGGATATCGAAATCAAGAACTACTGGAAAATTAATTTGTCAAAGAGAGTGCACCATCATCAACACAAACCTCAAGAAAACAAACACAACGATCTTAGATTCTCCAACAATATTATTCAAAATGGTGATGGTgatatttataatattgatCAAAATGATGAAATTGATGAGAAGGTGATTGGTAGACATGGATTAAAAGGTGCTTGGTCTAGAAAAGAAGATCAAATTCTCTCCAATTATGTAGCTCTTCATGGAGAAGGCCAATGGGAAAAGGTTTCCCAAAGAATAGgtTTGAAGAGAAGTGGAAAGAGTTGTAGACATCGATATCTGCACTATTTGAAACCTGGTATAAAGCGAGGTAATTTCTCTAAAGACGAAGAAGATATGATTATAAgacttcatcatcttcatggCAAcagGTGGACTTTGATAGCTCAAAATCTAGCAGGAAGAAAAGATAGTGAAATCAAGAATCACTGGCATGCTTATTTGTCTAAGAAATTTACAAGCCATAATAATCAACTCAAGCCTCAAGAACCCAAAAGTATAAATAGTACTATTATTTTAGATGATTCATCACAAGTTGATCCTAATTTGGAGGATAATAATATTATGAGGTGGTCTGAATTAGATAATAACACAAACACACCTATTACTCCTAATACATCCTTCTCATCAATAGAGTTTGATGATTTCCTCTTCAATATTCTTCAGAATGATCAAATTATTGGAGATGATCATCATCTTGATTTGAGCTCAAACATAACACAAATGGAAGAGCACAATTACAATATATttgcttcttcatcatcatcatctattgATAATTTTTGTCAACTATCAGAAGATGTTTTGGATTTTTGGACAAGTGAATTTTCCTGGACTGACTTGTAG 1116 0.3163 MRMKKTFPLRGSRRRMDGISLKRCAKSCRYRYLNYLRPGIKRGDISEDEENLIIALHRQLGNRWSLIAKRLPGRSDIEIKNYWKINLSKRVHHHQHKPQENKHNDLRFSNNIIQNGDGDIYNIDQNDEIDEKVIGRHGLKGAWSRKEDQILSNYVALHGEGQWEKVSQRIGLKRSGKSCRHRYLHYLKPGIKRGNFSKDEEDMIIRLHHLHGNRWTLIAQNLAGRKDSEIKNHWHAYLSKKFTSHNNQLKPQEPKSINSTIILDDSSQVDPNLEDNNIMRWSELDNNTNTPITPNTSFSSIEFDDFLFNILQNDQIIGDDHHLDLSSNITQMEEHNYNIFASSSSSSIDNFCQLSEDVLDFWTSEFSWTDL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0110 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 91 IPR017930 -
Sto9g0110 371 Gene3D - 139 192 - -
Sto9g0110 371 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 21 117 - -
Sto9g0110 371 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 140 340 - -
Sto9g0110 371 Pfam Myb-like DNA-binding domain 140 187 IPR001005 -
Sto9g0110 371 Pfam Myb-like DNA-binding domain 193 238 IPR001005 -
Sto9g0110 371 Pfam Myb-like DNA-binding domain 42 84 IPR001005 -
Sto9g0110 371 CDD SANT 195 238 IPR001005 -
Sto9g0110 371 CDD SANT 142 187 IPR001005 -
Sto9g0110 371 Gene3D - 45 111 - -
Sto9g0110 371 Gene3D - 195 261 - -
Sto9g0110 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 188 242 IPR017930 -
Sto9g0110 371 SUPERFAMILY Homeodomain-like 22 96 IPR009057 -
Sto9g0110 371 ProSiteProfiles Myb-like domain profile. 188 238 IPR001005 -
Sto9g0110 371 PANTHER MYB TRANSCRIPTION FACTOR 140 340 - -
Sto9g0110 371 PANTHER MYB TRANSCRIPTION FACTOR 21 117 - -
Sto9g0110 371 ProSiteProfiles Myb-like domain profile. 140 187 IPR001005 -
Sto9g0110 371 ProSiteProfiles Myb-like domain profile. 37 87 IPR001005 -
Sto9g0110 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 187 IPR017930 -
Sto9g0110 371 SUPERFAMILY Homeodomain-like 140 234 IPR009057 -
Sto9g0110 371 CDD SANT 46 87 IPR001005 -
Sto9g0110 371 SMART sant 192 240 IPR001005 -
Sto9g0110 371 SMART sant 41 89 IPR001005 -
Sto9g0110 371 SMART sant 139 189 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0110 Sto-Chr9 996106 1000187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0110 21 96 MYB Transcription Factor Family AT5G40330 59.211 6.47e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto9g0110 Myb_DNA-binding 2.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0110 K09422 - gmx:547568 166.007