Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0105 atgaccaTGGAACCAAATCCAGCCTCAGATCACATTCTAGATTGGCTTGAAGGCTCTGTTTCTTTCTTCCCATCATTCTTGGATGATCCATACAACACAGATGGCATCGAAGATTATCAATTGTGGGGTCAAGGACAAGACATAGGCTACCAGGTTGAGGTTGGTCCTGCATCTCCCAATGCTATTAGTCCCAGCAAAACACCCACTGAGCCATATAGTTCTAACAACCCATCACCTCCTAATTCTGATCTGCCAAAGAAAAGAAATGCTTCTGATGCTCTATCTTTGAAATCATCTCAGAATCATAAGTCCAAGAAAAGTAAGAGCCGTCCTGTGGCTGTGACTGTGACTGTGAGTGAATCTGACAATGGAGATGCAGTTGTTGTTGAAGGGTCAAAAACAGTTAAGAAATCTGGTTGGAACAAGAAGGGTTTGGCTAAGGCCAACGGGAATAACTGTAATAACggtaacaacaacaacaacaaggaAGGGAGATGGGCAGAGCAGTTGTTGAACCCTTGTGCTCTGGCTCTTGCTGCAGGGAATCTCAATCGTGTGCAGCACCTCTTATATGTTCTTCATGAGCTCGCCTCGCCTTCCGGCGATGCCAATCATCGCCTTGCCGGCCATGGTCTCCGAGCACTGACACACCACTTATCTTCTTTCACATCCTTTTCTTCCTCCTCTGCATCATCTGCAGGGCATACTACTACTTTTGCTTATGCAGACCCAAGGTTCTTCCAGCGATCTTTGCTTAAGTTCTATGAGGTTAGCCCTTGGTTTTCCTTTCCTAATAACATTGCAAATTCTTCCATTCTGCAAATTCTAGCAGAAGAACCAAAGAGTTCACAACAACATACCCTTCACATACTTGACATTGGGGTCTCTCATGGTTTTCAATGGCCAACATTCCTAGAGGCCTTGACTCGCCGGCCTGGCGGTCCTCCTCCATTGGTTCGCCTCACGGTGGTGACTGCCTTTGCagaaaatgaccaaaatatGGAGACCCCATTTGCAGTTGGTCCTCCTGGTGACAACTTCTCTTCTAGACTGCTTGGTTTTGCCAAGTCCATGAACATCAATTTACAGATAAACAGGCTGGATAATCATCCATTGCAGAATCTAAATGCTCAGATTCTCAAAATCTCGCCAGATGAAACCTTTATTGTATGTGCACAATTTAGGCTGCACCAGCTGAATCATAACACACCTGATGAACGAAGTGAGTTTCTGAAGCTGCTGTGGAAGATGGAGCCCAAGGGGGTGATACTAAGTGAGAACAACATGGAGTGTTGCTGCAGCAGTTGTGGGAATTTCGCCACTGGGTTCGAGCGAAGAGTGGAGTTCTTATGGAAGTTCTTGGAATCGATAAGCTCGGCATTCAAGGGCAGGGAGAGTGAGGAGAGGAGACTGATGGAAGGAGAGGCTGCAAAAGCACTGACAAACCAGCGAGAGATGAATGAAGGGAAAGAGAAATGGTGTGAGAGAATGAAAGAGGCAGGGTTTGCAGGGGAGATATTTGGAGAGGACGCCATTGATGGAGGTAGAGCTTTATTGAGGAAGTATGATAATAACTGGGAGATGAGAGTAGAAGAGAACAGTATGAGTGTGGGACTATGGTGGAAGGGGCAGCCTGTTTCTTTCTGTACATTGTGGAAGCTGAATGAGAACGATAAGGGTGGATCAGATAGTACCATTCCTACGCCTGAAAGGTTTCCAAATACAAATCAGCATTGTCGGCTTGGCTTTCCTGCTGAAACTGCCTTTGTTGCCTCCACTGTTTCCACTTATTCCAGTTCCTGA 1803 0.4498 MTMEPNPASDHILDWLEGSVSFFPSFLDDPYNTDGIEDYQLWGQGQDIGYQVEVGPASPNAISPSKTPTEPYSSNNPSPPNSDLPKKRNASDALSLKSSQNHKSKKSKSRPVAVTVTVSESDNGDAVVVEGSKTVKKSGWNKKGLAKANGNNCNNGNNNNNKEGRWAEQLLNPCALALAAGNLNRVQHLLYVLHELASPSGDANHRLAGHGLRALTHHLSSFTSFSSSSASSAGHTTTFAYADPRFFQRSLLKFYEVSPWFSFPNNIANSSILQILAEEPKSSQQHTLHILDIGVSHGFQWPTFLEALTRRPGGPPPLVRLTVVTAFAENDQNMETPFAVGPPGDNFSSRLLGFAKSMNINLQINRLDNHPLQNLNAQILKISPDETFIVCAQFRLHQLNHNTPDERSEFLKLLWKMEPKGVILSENNMECCCSSCGNFATGFERRVEFLWKFLESISSAFKGRESEERRLMEGEAAKALTNQREMNEGKEKWCERMKEAGFAGEIFGEDAIDGGRALLRKYDNNWEMRVEENSMSVGLWWKGQPVSFCTLWKLNENDKGGSDSTIPTPERFPNTNQHCRLGFPAETAFVASTVSTYSSS 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0105 600 Pfam GRAS domain family 168 553 IPR005202 -
Sto9g0105 600 ProSiteProfiles GRAS family profile. 158 553 IPR005202 -
Sto9g0105 600 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 553 IPR005202 -
Sto9g0105 600 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 553 IPR030015 -
Sto9g0105 600 MobiDBLite consensus disorder prediction 58 85 - -
Sto9g0105 600 MobiDBLite consensus disorder prediction 50 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0105 Sto-Chr9 917313 920416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0105 2 553 GRAS Transcription Factor Family AT3G13840 50.000 4.65e-165 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto9g0105 GRAS 8.5e-74 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0105 - - gmx:100806550 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0105 9 917313 920416 Sto9g0105 9 917313 920416 ECH