Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0092 ATGCCTACTTTGAAAAAGCTTCTTTTAGAAACCTTTATTCTTGGTTGTTTCAATTCCAATCAAGCATCTTCTTTGGATCCATGTAGTAATGACAATAATAACAATACTTTTGCTTCCAAGAAGACATCCTCAAGAAGATTGTCCCTCTCTGATTTGAGCAATTCTTCTTCTGTGTCTATCATGAGTGATCTCTCAAACTCTGTTCTTGGATCAAATCTTCATATCTTCACCCTCAAGGAGCTCAAGGACATCACTCATGGCTTCTGCAAAACCAGTGTTCTTGGGGAAGGTGGTTTTGGGAAGGTATATAAAGGCTTCATTGATGATAAGCTTAGGCCTGCCTTGAAACCTCAAGTTGTAGCAGTTAAAAATTTGGACTTGGATGGAAAACAAGGCCATAGAGAGTGGTTGGCTGAAGTGATCTTTCTGGGGCAGTTGAAGCATCCTCATCTGGTGAAGTTAATTGGGTATTGTTGTGAAGATGAGCATAGACTTCTTGTTTATGAATACATGGAGAGAGGCAATCTAGAGCACAAGCTTTTCAAGGGTTATTTAGCAGCCTTGCCTTGGCTAACAAGAATCAAAATAGCTATTGGAGCTGCAAAGGGACTTGCTTTCCTTCATGAAGAAGAGCAACCTGTCATATACAGAGATTTCAAGGCCTCAAACATCCTATTGGATGCTGATTACAAAGCCAAGGTCTCTGATTTTGGGCTGGCCATTGATGGCCCAGAACAAAACCAAACCCACATTACAACTCGCGTGATGGGTACCCATGGCTATGCTGCTCCGGAATACATCAACACAGGTCATTTGACAACTATGAGTGATGTTTATAGCTTTGGAGTGGTTCTTTTGGAGCTGATCACAGGAAAGAGGTCAGTGGACAAGAATCGTCCAATGAGAGAGCAGGATTTGGTAGAGTGGGCAAGACCCTTGTTAAAGGATTCCCATAAACTAGAAAGGATAATGGACCCAAGGCTAGAGGGTCAATACTCCTATGAAGGGGCCAGAAAGATGGCTGCTTTGGCTCACCAATGTCTGAGCCACCAAGCCAAGGCTAGACCCTCCATGCGCAAAGTGGTCAAGACCCTAGAGCCTCTCATGAACCTCACTGACATCCCAATGGGGTGTTTTGTGTATGTGGCCCCCACTGAAGAAAAACCAGTAATTCAACAATCTTATGGCATTGCCAATATTCTTAGTACCGAGAAGAAGGAAATCATATAA 1230 0.4285 MPTLKKLLLETFILGCFNSNQASSLDPCSNDNNNNTFASKKTSSRRLSLSDLSNSSSVSIMSDLSNSVLGSNLHIFTLKELKDITHGFCKTSVLGEGGFGKVYKGFIDDKLRPALKPQVVAVKNLDLDGKQGHREWLAEVIFLGQLKHPHLVKLIGYCCEDEHRLLVYEYMERGNLEHKLFKGYLAALPWLTRIKIAIGAAKGLAFLHEEEQPVIYRDFKASNILLDADYKAKVSDFGLAIDGPEQNQTHITTRVMGTHGYAAPEYINTGHLTTMSDVYSFGVVLLELITGKRSVDKNRPMREQDLVEWARPLLKDSHKLERIMDPRLEGQYSYEGARKMAALAHQCLSHQAKARPSMRKVVKTLEPLMNLTDIPMGCFVYVAPTEEKPVIQQSYGIANILSTEKKEII 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0092 409 PANTHER OS01G0588500 PROTEIN-RELATED 36 395 - -
Sto9g0092 409 Gene3D Transferase(Phosphotransferase) domain 1 171 374 - -
Sto9g0092 409 Pfam Protein tyrosine and serine/threonine kinase 92 365 IPR001245 GO:0004672|GO:0006468
Sto9g0092 409 SUPERFAMILY Protein kinase-like (PK-like) 63 366 IPR011009 -
Sto9g0092 409 ProSiteProfiles Protein kinase domain profile. 88 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0092 409 ProSitePatterns Protein kinases ATP-binding region signature. 94 123 IPR017441 GO:0005524
Sto9g0092 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Sto9g0092 409 CDD STKc_IRAK 94 368 - -
Sto9g0092 409 PANTHER BNAA02G16030D PROTEIN 36 395 - -
Sto9g0092 409 Gene3D Phosphorylase Kinase; domain 1 35 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0092 Sto-Chr9 813917 820196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0092 74 407 Glycoside Hydrolase AT3G07070 46.291 3.33e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto9g0092 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0092 - - gmx:100790454 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0092 9 813917 820196 Sto1g0508 1 4673970 4682833 ECH
Sto3g1033 3 7120384 7122358 Sto9g0092 9 813917 820196 ECH
Sto9g0092 9 813917 820196 Sto9g0092 9 813917 820196 ECH
Sto9g0092 9 813917 820196 Sto5g0968 5 6516383 6522543 ECH