Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0088 ATGGAATTGGTAGCTTCTCCAAGTTGGCTCTCACTCTCAACTGCAGCCGCATGCCTTGCAACCTTCACCATCCTCCTCCTCTTCGGCCGCCGTCGGAGATACAACAGGCCCCCAGGCCCAAGACCATGGCCCATCATTGGCAATCTCAACCTCATAGGCCCACTCCCTCACCGCTCCATCCACGCCCTCTCCAACAAGTACGGGCCCATCATGCAAGTGTGGTTCGGGTCCAACCCAATCGTGGTGGGCTCCTCCGTCGAAATGGCCGAAGCTTTCCTCAAAACCCACGACGGCACCATAGCGGACCGGCCGAGGTTCACCGCCGGCAAATACACACTGTACAACTACGCCAATATCACGTGGTCCCAATACGGCCCATACTGGCGACAAGCTCGCAAGATGCTACTAACTGAATTGTTAAGTCCAAAACGCTTAGAGTCGTATGAGTATATCcgaaaagaagaagtaaaaaataTGGTTAAGCGACTTTATGAATCCGCCAATAAAACTGTAGTTTTGAAACATCACCTTTTTGCTTTGACTCTCAACGTTATAAGCAGGATGGCGTTGGGGAAGAAGTTCACAGGGAGGATCAACGAGAACGCCGTCGTTTCATCGAGTCACGAGTACATTGAGATGGTGGATGAGTTGCTTTTTTTGAATGGGGTTTTGAACATTGGGGACCTTATTCCTTGGCTTAATTTTATGGACTTGCAGGGTTATATTAAGAGAATGAAGGATTTGAGAAAGAAGCTTGACAAGTGGATGGAGGATGTGTTGGATGAacatgaagaaagaagaagaaaaaagattgAGAATTATGTGGCAGAAGACATGGTGGATGTGCTTCTTCAGCTCTCACAAGATCCTACCCTTGAGGTCAAGATTCAGAGGGATGGTGTCAAATCTCTTACTCTGGAATTAATAGCTGGTGGGACAGATACTTCATCGGTAACACTAGAATGGGCAATGTGTGAGCTACTGAGGAAGCCAAAGATGTTGAAGAATGCAAGAGAAGAGTTGGACAGAGTAATAGGAAGAGAGAGATGGGTTGAAGAGCAAGACATTCCCAATTTACCTTACATCAATGCAATTATGAAGGAAACCATGAGGCTCCACCCTGTGGCTCCAATGTTAATACCAAGGCTAGCTAGACAAGACTTTAAAATTGCAGGTTATGACATCCCTAGAGGCACTCAAGTCCTTGTCAATATTTGGAGCATAGGGAGGAACCCTTTAGTTTGGGACAATCCTAATGAGTTTGAACCAAAGAGATTCATAGAGAAAGCAATTGATGTGAAAGGTCATAATTTTGAATTACTACCATTTGGAGCAGGAAGAAGGATGTGTCCCGGTTACTCCTTTGGGCTGAAAGTAATTCAAGTAAGCTTAGCCAATTTATTGCATGGAGTGGGAGAGGATTTACTCGGACGCATGTATAAGTCCTTCGACTCCTATACCTGGAAGGGGATACTCAAGGCTAAAAATAGACTCATTGAGGGGTTTGGCTTTAGAATTGGTGATGGAAGGAGTACAAAGCTGTGGACGGATACCTGGGTTGGTGAGAAGCCCCTAATTGATGTGATTGGTAACAATGCTGAGCATATTCTTGATATCAATGAGACGGTGAGCTCTATCATCACTGATAATAGGTGGCAGCTGGAGGGAATCTCTAACATCTGCCCCCAGAATGTGATAAGAGAAATTGAGAGCATCCCACTCCCTTTGTTTTCCCAGTTGAGTGATGCTCTGACCTGGAAATCCTCCCCTAACGGGAAGTATTCTGCAAAAAGCGGATATTACTTTCTGAATAGCTCCCAGGTTTGCTCTCAACTCGTGTTCCCTTGGAAGGACGTTTGGAGGTTGAAGTGCGCCGAGAGCATCAGGTTCTTCATTTGGATCATCTGCAATACGGCTCTTCCCACTAACTCCCTGCGAGCGCAACGTGGTATGAGTGCGTCTAGTATTTGCCGTAGGTGTAACTATTCGGAGGAAACAATTGTGCACTGCCTAAGAGATTGCCCTGCGGCCAAGGCCACGTGGCTTCATTTCGGATTTGGAAGTACCTTGAACTTCTTCAACTACGATCTGAACTCTTGGATCCTCTCCTTCACTGGCCTAAGACGAAATGATCATAGGTTGGATGATGTCAAGTTCCTGTGCATCATTTATGGCAGTTGGAAGCATAGGAACACATGTGTTATTGATGGTGGTTCCCCCAACTATATCAAGTTGCATAAGGAGATTGAACTAGACATTGATATGGCTTGGCAAGTTTTCTCTGACTCGGCTAACATTAGCAGTTGTGATAGTCGTTGTGTCAGTTGGAGCAAGCCTAAGCAGGGTATGATCAAGCTAAATACGGATGGGAGTTCCTTTGGCAATCCGGGGATGGCTGGATATGGTGGGATTTTTAGAAATGAAGATGGTGGATGGCTATGTGGCTACTCGGGCTTTATTGGTATAAGGACTAGTATGTTTGCTGAACTAACGGCGATTAAGCATGGTCTGAACCTTGCTATCAACAAGGGTTTCTTAAAATTGGAAGTTGATTCTGATTGCCAGGAAGCTGTGAACTTAATTTCTTCTGGGGATATCTCCTCTCATCATCTTGGAGTCATCATCAACGACATTAGAACTCTGAGTAAAAGTTTTGAAGCTATCTCCTTTAAGCATATCCTCCGTGAGGCCAATTTTTGCGTTGATGGCCTTGCTAAACTTGGTGCTCGGAATCGTGTGGAGTCCTATGTCTGGGAAGTTCCCCCTCCCGATATTTCTCTCGCTCTGCTTGCGGATCATGCTGCATTTGGTTTCTGTAGGCCTTAG 2826 0.4512 MELVASPSWLSLSTAAACLATFTILLLFGRRRRYNRPPGPRPWPIIGNLNLIGPLPHRSIHALSNKYGPIMQVWFGSNPIVVGSSVEMAEAFLKTHDGTIADRPRFTAGKYTLYNYANITWSQYGPYWRQARKMLLTELLSPKRLESYEYIRKEEVKNMVKRLYESANKTVVLKHHLFALTLNVISRMALGKKFTGRINENAVVSSSHEYIEMVDELLFLNGVLNIGDLIPWLNFMDLQGYIKRMKDLRKKLDKWMEDVLDEHEERRRKKIENYVAEDMVDVLLQLSQDPTLEVKIQRDGVKSLTLELIAGGTDTSSVTLEWAMCELLRKPKMLKNAREELDRVIGRERWVEEQDIPNLPYINAIMKETMRLHPVAPMLIPRLARQDFKIAGYDIPRGTQVLVNIWSIGRNPLVWDNPNEFEPKRFIEKAIDVKGHNFELLPFGAGRRMCPGYSFGLKVIQVSLANLLHGVGEDLLGRMYKSFDSYTWKGILKAKNRLIEGFGFRIGDGRSTKLWTDTWVGEKPLIDVIGNNAEHILDINETVSSIITDNRWQLEGISNICPQNVIREIESIPLPLFSQLSDALTWKSSPNGKYSAKSGYYFLNSSQVCSQLVFPWKDVWRLKCAESIRFFIWIICNTALPTNSLRAQRGMSASSICRRCNYSEETIVHCLRDCPAAKATWLHFGFGSTLNFFNYDLNSWILSFTGLRRNDHRLDDVKFLCIIYGSWKHRNTCVIDGGSPNYIKLHKEIELDIDMAWQVFSDSANISSCDSRCVSWSKPKQGMIKLNTDGSSFGNPGMAGYGGIFRNEDGGWLCGYSGFIGIRTSMFAELTAIKHGLNLAINKGFLKLEVDSDCQEAVNLISSGDISSHHLGVIINDIRTLSKSFEAISFKHILREANFCVDGLAKLGARNRVESYVWEVPPPDISLALLADHAAFGFCRP 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0088 941 Pfam Cytochrome P450 37 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto9g0088 941 Gene3D - 783 916 IPR036397 GO:0003676
Sto9g0088 941 PANTHER CYTOCHROME P450 98A9 6 472 - -
Sto9g0088 941 SUPERFAMILY Ribonuclease H-like 782 912 IPR012337 -
Sto9g0088 941 Pfam Reverse transcriptase-like 787 906 IPR002156 GO:0003676|GO:0004523
Sto9g0088 941 ProSiteProfiles RNase H type-1 domain profile. 780 910 IPR002156 GO:0003676|GO:0004523
Sto9g0088 941 Coils Coil 238 265 - -
Sto9g0088 941 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Sto9g0088 941 SUPERFAMILY Cytochrome P450 37 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto9g0088 941 CDD RNase_H_like 786 906 IPR044730 -
Sto9g0088 941 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto9g0088 941 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto9g0088 941 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto9g0088 941 Pfam zinc-binding in reverse transcriptase 594 681 IPR026960 -
Sto9g0088 941 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto9g0088 941 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto9g0088 941 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto9g0088 941 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto9g0088 941 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto9g0088 941 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto9g0088 941 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto9g0088 941 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto9g0088 941 Gene3D Cytochrome P450 29 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0088 Sto-Chr9 796494 800502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0088 22 477 Cytochrome P450 AT5G07990 39.490 1.79e-115 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0088 K20623 - gmx:100790480 654.055