Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0063 ATGTCTAATTTCTCCGATACGGTGGCCGGTGGCCGGAGGTCCGGCAGGGCGGTCGAGAAGTCCAATTTCTCCCAGGCTTGCAGCCTCTTGAGCCAGTTATTGAAGGAGAAGCGAGGGTCCGGAGCTTTAAGCCATGGAATGGCTGGGAAAATGGAATCCAGAGCAACTTCGAAGGACATATTAACAAACCTGGAAAATCCTGATGATACATTGAGACTAAATGCTTCAGCTCTGGAATTTCTTCCACAGTTTGTGGAAAACACCTGCATCAAGAAGTCTGATACAAGGTGTAGGTCAGAGCCTGAAACTCCACAATTGACCATATTTTATGCCGGAAAAGTGTTAGTGTTTGATGCTTTTGCTCCTGAGAAGGCCACGGAGATCATGGAGATGGCCACCAAGTTAAGCTCTGATAGTACTGATTCTGGCACTGACAAGAATACCCCAAGTGCCTCTGCTGCTAAAGAAAATCTGGATGTGGCCAAAGTGCCTCAAAACAACGCTGCCCAAGAAGTCCCTAGATCAGGACCCCAACCTATAAAATCAGATATGAGATATCCAAGGAGAGCTTCACTTCTGAAATTTCTTGAGAAGAGGAAAGAAAGGGTGATTGCTAAAGCACCATACCAGCTGAACAACCCAAAACAAGATGGAAGCAGTTCAGGAGGAGGTGACACTGAAGATTCGAAATTCCTTGACCTTAACTTATAG 711 0.4599 MSNFSDTVAGGRRSGRAVEKSNFSQACSLLSQLLKEKRGSGALSHGMAGKMESRATSKDILTNLENPDDTLRLNASALEFLPQFVENTCIKKSDTRCRSEPETPQLTIFYAGKVLVFDAFAPEKATEIMEMATKLSSDSTDSGTDKNTPSASAAKENLDVAKVPQNNAAQEVPRSGPQPIKSDMRYPRRASLLKFLEKRKERVIAKAPYQLNNPKQDGSSSGGGDTEDSKFLDLNL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0063 236 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 8 232 - -
Sto9g0063 236 MobiDBLite consensus disorder prediction 212 226 - -
Sto9g0063 236 Pfam Jas motif 188 210 IPR018467 -
Sto9g0063 236 ProSiteProfiles Tify domain profile. 99 134 IPR010399 -
Sto9g0063 236 MobiDBLite consensus disorder prediction 133 187 - -
Sto9g0063 236 Pfam tify domain 100 132 IPR010399 -
Sto9g0063 236 MobiDBLite consensus disorder prediction 204 236 - -
Sto9g0063 236 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 8 232 IPR040390 -
Sto9g0063 236 SMART tify_2 99 134 IPR010399 -
Sto9g0063 236 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0063 Sto-Chr9 570680 572998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0063 5 234 Tify Gene Family AT1G19180 35.938 1.63e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sto9g0063 tify 9.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0063 K13464 - gmx:100815478 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0063 9 570680 572998 Sto9g0063 9 570680 572998 ECH