Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0058 ATGTATGATTCTTCCTTCCACAATACTgactccttcttctcctcctcctcctcaccACGCCATTACCCTTCTCCTGCAACCTCTCGCAATGCCTCTGTCTCCTTCACCACAGCTTCCAGAAACACCCGCCAAAACAGAGTCCCTACTCCCCCTACTACACCTTTCGCTTCAGACTACGACCATTCTTGGAAATCACAGATTTCATGGCAATTTGAGCCCAATGAGTGGCTCAACCATAGCACAACCCTAGGCTCTGTTCTTAGCCCTTGGTCTTCTGGGTCATCTCCATCGGGTCCCTCTCACGCATTTCGTCGAACAGCTAATGGGTATTACCTTTCTCGAACATGTGGTGAGTCCAGAGGCCTcgcggattcgtattatgaacACTCAGGGTACGCCCCGGGAGGGAGAATCGAGCTCCAGAGCTACGTTGCTGGTGAATCTCGTAATGGGTTCTCGAAATTTGGGGCAATCAAAGAAGGGAATAGTGGAGATGAAGCTGGTAAGAGTAAGACTATTATTAGTCCATTGAATGTTCAGGAAGATGAAGGGAGTATGATGATGAAATATAATGGTGTATTTGATCATAATCCTGATGAATTATTGTATAGTAGTcaatttgatgatgatgataggtGTATTAGTGATTATGAGAATGAGAGGGTTTCAAGATATGGTGAAGATAGTAGAGAGGGAGATGTGGAAGATGATGAGGGTGATGGAAGATCAATTGGAGTGATGAGTATGTTTAGGTACTCAACAAAGTGGGATTGGGTGCTTGTGATTGTGGGTTGTTTAGGGGCTCTCATAAATGGAGGATCACTTCCTtggtattcatatttttttggtaatttggTCAATAAGATTGCTAGAGAATCAAGTGGAGACAAAACACAAATGCTCAATGACATACAACAGATATGCATATTTATGATGGGGTTTGCTGCAGTGGTGCTGGTAGGAGCATACTTGGAGATCACATGTTGGAGGCTGGTGGGAGAGAGATCTGCTCAGAGAATAAGAAGTGAGTATTTAAGAGCAGTCCTTAGACAGGACATTGCCTTCTTTGATACAGACACCACCACTGCTGACATTATGCATGGAATTGCAAGTGATGTTGCACAAATTCAAGAAGTCATGGGCGAGAagATGGCTCACTTCATTCATCATGTATTTACATTCATTTGTGGGTATACAGTTGGGTTTCTAAGGTCATGGAAAGTATCTCTGGTGGTATTCTCAGTCACCCCATTGACTATGTTCTGTGGCATAGCTTACAAAGCTGTCTATGGAGGTCTAACAGCAAAAGAGGAAgctTCATATAGGAAAGCTGGGAGTGTAGCAGAGCAGGCCATCAGTTCAATTAGGACagtgttttcttttgttgcaGAAGGCCAATTGGCTTCAAAATACAGTGGACTACTGCAAAAATCAGTGGCATTTGGAGTAAAAATGGGGTTTGCAAAGGGTGGAGGCATGGGAGTTATATATCTAGTAACTTATTCAACATGGGCCTTGGCTTTCTGGTATGGCTCTATTTTAATTGCCAGAAATGAGATTGATGGAGGTGCAGCCATTGCTTGCTTCTTTGGTGTTATGGTTGGAGGAAGAGGGTTGGCATTGGCACTTTCATATTTTGCACAATTTGCACAAGGTACTGTTGCAGCAAGCAGAGTATTTGAAATTATAGACAGAGTTCCTGAGATTGACCCCTACAGCACTGAAGGAAAGAAGCTTTGGGAGGTTCGTGGAAGGATTGAATTCAAGGATGTTAGCTTTGCATACCCATCTCGTCCTCATGCTCTCATTCTTCATTCATTTAACTTGGTCATTCCATCTGCAAGAACCCTAGCCTTGGTTGGTGCTAGTGGAGGAGGCAAGTCTACTATTTTTGCTCTCATAGAGAGGTTTTATGATCCCATTCAAGGGCTAATAACCTTGGATGGTCATGATTTGAGAAGCCTTCAAGTGAAATGGCTAAGAGATCAGATAGGAATGGTAGGTCAGGAGCCAATTCTATTTGCCACAACCATACTAGAAAATGTGATGATGGGGAAGGAGAATGCCACCAAGAAAGAGGCAATTGATGCTTGCATTGCTGCTAATGCTCATACCTTCATTTCTAGCCTACCTCTAGGCTATGACACTCAGGTTGGAGACAGGGGAATCCAACTCTCAGGAGGTCAAAAGCAGCGAATTGCATTAGCTCGAGCCATGATCAAAGATCCTAAAATACTCCTTTTAGACGAACCTACCAGTGCTCTTGATTCTGAGTCAGAGTTTATAGTCCAACTAGCCATTGACAAGATTTCTTCTGGCCGAACCACCATTGTCATTGCTCACAGGATAGCCACAGTAAGCACTGCTCACACCATTGTAGTTCTTGACCATGGTCATGTCACTGAGATTGGCAACCATAGCCAGCTTATGGGAAAAGCTGGCACCTACAATAACCTCTTCAAGCTTGCTTCTGAACCCATTTCAAAAACTATGCCTAGAGAGAATGTCACACAAAATGCTAATGATTTTTCCATCTCTGACAAATCTTTTCCTTATATCTCTAGCACTCACTCCAAGTCCATGCAAGAGGAAAAACTAGCAGATGTTGAAGATAATAATGAGCACCAGAAGAAGCCACGAAGAAGTTTCAGGCTTTCTGAGATATGGAATCTGCAAAAGCCTGAGCTTGTGAAGCTATTGTTTGGATTCCTTATGGGTATGCATGCAGGTGCTTTCTTGTCCATTTTTCCATTTATTTTAGGCATGGCCCTTGAAGTATACTTCCAAGAAGACACTTCAAAGATGAGAAGAGACATCAACCACCTTTGTTTAGCACTTGTTGGGGTTGGATTTGGATGCATAATCTCCATGACAGGACAGCAAGGTCTGTGTGGTTGGGCTGGAACAAAACTCACATTAAGGGTTAGAGACCTTTTGTTTCGGGCCATACTAAAACAAGAACCAGGATGGTTTGATTTTGAAGAGAATTCCAATGGAGTTTTAGTGTCAAGACTATCAATTGACTGTGTTAGCTTTCGTTCAGTGCTTGGTGATAGATTTTCAGTACTTCTTATGGGGTTGAGTTCAGCTGCTGTAGGGCTTGGTGTGTCGTTTTTCCTTGAATGGAGACTAACTCTTTTGGCTGCTGCTTTAACCCCTTTCACTCTTGGTGCAAGCTACTTAAGCTTGATCATAAACATAGGGCCAAGAGTTGATAATAATTCTTATGCTAGAGCTAGTAATATTGCTTCTGGTGCAGTTTCTAACATAAGGACAGTCACTACATTTTCTGCCCAAGAACAAATAGTGAAGTCCTTTGATCTAGCCTTATCAGAGCCCAGGAGAAAATCAGTGAAAAGGTCACAAATTCTAGGTCTAACACTCGGGTTTTCTCAAGGAGCCATGTATGGAGCATACACCTTAACTCTTTGGTTTGGTGCCTACCTTGTGAAACAGAACAAAACAGAGTTTGGAGATGTGTACAAGATCTTTCTCATTCTGGTTTTGAGCTCATTTTCTGTGGGGCAACTAGCAGGTTTAGCACCAGATACTTCCATGGCAGCCACAGCAATTCCTGCAGTTCTAGATATCATAAACCGTAGGCCATTGATATGCAGTGATGAAACAAAAAAGGGCAGGAAGAAGATGGAAAGATCAAATTCAAAGCCATTGGAGATAGAGTTCAAGATGGTGACATTTTCTTACCCATCTAGGCCAGAGGTGACTGTGCTGAAAGATTTTTGTTTGAAAGTGAAAGGAGGAAGCACAGTGGCTTTAGTGGGGGCAAGTGGGTCAGGAAAATCAACAGTGATATGGATGATACAGAGGTTTTATGATCCAAATAAAGGAAAAGTGATGGTGGGTGGGTTGGATTTGAGAGAGGTTAATGTGAAGTGGTTGAGGAAGCAAATAAGTTTGGTGAGTCAAGAACCTGCACTTTTTGCAGGGAGTATAAGGGAGAATATTGCCTTTGGGGATCCAAATGCTTCATGGGCTGAAATTGAAATGGCTGCTAAGGGAGCTTACATTCATAAGTTCATAAGTGGCCTTCCTCAAGGTTATGAAACTCAGGTGGGTGAAGGTGGGGTCCAGCTATCAGGTGGACAAAAGCAAAGAATAGCAATAGCAAGAGCCATAGTGAAGAAATCAAGAGTGATTCTACTTGATGAAGCAAGCAGTGCTTTGGACTTGGAATCAGAGAAGAATGTCCAAAAAGCACTTTCAAATGTCACAAGAGAAGCAACGACCATAGTAGTAACTCATCGTCTATCCTCAATCACAGAGGCTAATAGGATCGCAGTTATAAAAGATGGAAAAGTGGTGGAATATGGAACTCATCACACTCTCATGGCTTCTTCCCACTTTAATGCTTTATATGCTAATCTTGTTCGTGCTCACACCCAAGCCAATGCCTTTTCTTGA 4422 0.4154 MYDSSFHNTDSFFSSSSSPRHYPSPATSRNASVSFTTASRNTRQNRVPTPPTTPFASDYDHSWKSQISWQFEPNEWLNHSTTLGSVLSPWSSGSSPSGPSHAFRRTANGYYLSRTCGESRGLADSYYEHSGYAPGGRIELQSYVAGESRNGFSKFGAIKEGNSGDEAGKSKTIISPLNVQEDEGSMMMKYNGVFDHNPDELLYSSQFDDDDRCISDYENERVSRYGEDSREGDVEDDEGDGRSIGVMSMFRYSTKWDWVLVIVGCLGALINGGSLPWYSYFFGNLVNKIARESSGDKTQMLNDIQQICIFMMGFAAVVLVGAYLEITCWRLVGERSAQRIRSEYLRAVLRQDIAFFDTDTTTADIMHGIASDVAQIQEVMGEKMAHFIHHVFTFICGYTVGFLRSWKVSLVVFSVTPLTMFCGIAYKAVYGGLTAKEEASYRKAGSVAEQAISSIRTVFSFVAEGQLASKYSGLLQKSVAFGVKMGFAKGGGMGVIYLVTYSTWALAFWYGSILIARNEIDGGAAIACFFGVMVGGRGLALALSYFAQFAQGTVAASRVFEIIDRVPEIDPYSTEGKKLWEVRGRIEFKDVSFAYPSRPHALILHSFNLVIPSARTLALVGASGGGKSTIFALIERFYDPIQGLITLDGHDLRSLQVKWLRDQIGMVGQEPILFATTILENVMMGKENATKKEAIDACIAANAHTFISSLPLGYDTQVGDRGIQLSGGQKQRIALARAMIKDPKILLLDEPTSALDSESEFIVQLAIDKISSGRTTIVIAHRIATVSTAHTIVVLDHGHVTEIGNHSQLMGKAGTYNNLFKLASEPISKTMPRENVTQNANDFSISDKSFPYISSTHSKSMQEEKLADVEDNNEHQKKPRRSFRLSEIWNLQKPELVKLLFGFLMGMHAGAFLSIFPFILGMALEVYFQEDTSKMRRDINHLCLALVGVGFGCIISMTGQQGLCGWAGTKLTLRVRDLLFRAILKQEPGWFDFEENSNGVLVSRLSIDCVSFRSVLGDRFSVLLMGLSSAAVGLGVSFFLEWRLTLLAAALTPFTLGASYLSLIINIGPRVDNNSYARASNIASGAVSNIRTVTTFSAQEQIVKSFDLALSEPRRKSVKRSQILGLTLGFSQGAMYGAYTLTLWFGAYLVKQNKTEFGDVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLDIINRRPLICSDETKKGRKKMERSNSKPLEIEFKMVTFSYPSRPEVTVLKDFCLKVKGGSTVALVGASGSGKSTVIWMIQRFYDPNKGKVMVGGLDLREVNVKWLRKQISLVSQEPALFAGSIRENIAFGDPNASWAEIEMAAKGAYIHKFISGLPQGYETQVGEGGVQLSGGQKQRIAIARAIVKKSRVILLDEASSALDLESEKNVQKALSNVTREATTIVVTHRLSSITEANRIAVIKDGKVVEYGTHHTLMASSHFNALYANLVRAHTQANAFS 1473
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0058 1473 PANTHER ABC TRANSPORTER B FAMILY 227 1472 - -
Sto9g0058 1473 SMART AAA_5 613 799 IPR003593 -
Sto9g0058 1473 SMART AAA_5 1253 1439 IPR003593 -
Sto9g0058 1473 Gene3D ABC transporter type 1, transmembrane domain 248 1190 IPR036640 GO:0005524|GO:0016021
Sto9g0058 1473 Gene3D - 1218 1471 IPR027417 -
Sto9g0058 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1223 1463 IPR027417 -
Sto9g0058 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 262 551 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g0058 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 900 1186 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g0058 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1226 1462 IPR003439 GO:0005524
Sto9g0058 1473 CDD ABC_6TM_Pgp_ABCB1_D1_like 262 559 - -
Sto9g0058 1473 SUPERFAMILY ABC transporter transmembrane region 249 570 IPR036640 GO:0005524|GO:0016021
Sto9g0058 1473 PANTHER - 227 1472 - -
Sto9g0058 1473 CDD ABC_MTABC3_MDL1_MDL2 586 823 - -
Sto9g0058 1473 Gene3D - 576 829 IPR027417 -
Sto9g0058 1473 Pfam ABC transporter transmembrane region 899 1170 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g0058 1473 Pfam ABC transporter transmembrane region 261 535 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto9g0058 1473 MobiDBLite consensus disorder prediction 1 58 - -
Sto9g0058 1473 CDD ABC_6TM_Pgp_ABCB1_D2_like 889 1204 - -
Sto9g0058 1473 CDD ABC_MTABC3_MDL1_MDL2 1226 1465 - -
Sto9g0058 1473 ProSitePatterns ABC transporters family signature. 725 739 IPR017871 GO:0005524
Sto9g0058 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 577 821 IPR027417 -
Sto9g0058 1473 Pfam ABC transporter 605 753 IPR003439 GO:0005524
Sto9g0058 1473 Pfam ABC transporter 1244 1392 IPR003439 GO:0005524
Sto9g0058 1473 SUPERFAMILY ABC transporter transmembrane region 888 1202 IPR036640 GO:0005524|GO:0016021
Sto9g0058 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 586 822 IPR003439 GO:0005524
Sto9g0058 1473 ProSitePatterns ABC transporters family signature. 1365 1379 IPR017871 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sto9g0058 Sto-Chr9 510755 519228 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0058 235 1468 Calmodulin-binding Proteins AT2G36910 40.269 0.0 948
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0058 K05658 - gmx:100816700 1964.89
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0058 9 510755 519228 Sto9g0058 9 510755 519228 ECH