Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0029 ATGGCCGATACGCTTCAGAACCCCACTAGCCCTAACCCTAAGATTTCCGCTTACTATCAGACCAGGGCGGAGCATTATGGCGTCGTCACCAGCGACTGGCTCGCCCAGGCTCAGGCCGCCGTCGCTCAGAATCCAGATGACAATGGGGTTTCGGGAACTCAAGTCAGGGTTTCGGATCCTGATAAGCCCTTCAGCGTGATCGACGAGTTCAATAGCTGGCGGAAACAGCCCGACTTGGCCGAGGCCGTGGCCGCCATTCGCGCCTTGGCGGCGGTGATTAGGAACAGTCAGGCTACCACTATGATGGAGCTGGAAATTGAGCTCAAGAAGGCTTCGGATTCTCTCAAGGCGCCTTTCAGAAATTGCATTGATTCCTGGGATACAACCTCAATCTCTTTGACAGCTGGCTGTGATTTGTTTATGCGATATGTAACTAGGACTTCTGCCTTAGAATATGAAGACTTCAATTCTGGAAAGTCACGCTTAATTGAACGTGCTGAAAAGTTTGGGGAAATCTCATACAAGGCTCGCAAAGTTATTGCAATGCTGGCTCAAGATTTTATATTCGATGGTTGTACAATTTTGGTTCATGGTTTTTCTAGAGTTGTTTTTGAAGTCCTGAAACTGGCAGCTCAAAATAAGAAACTGTTTCGGGTCTTCTGCACAGAGGGAAGACCAGACCGAACAGGTTTGCGGTTGTCTAATGAGCTGGCCAAACTCGATGTTCCCGTTAGACTCCTTATAGACTCTGCGGTGGCATATAGCATGGATGAGGTGGACATGGTGTTGGTGGGGGCAGATGGAGTGGTTGAAAGCGGAGGTATAATTAACATGATGGGAACATACCAAATTGCATTGGTAGCACACAGTATGAATAAACCAGTTTATGTGGCCGCCGAAAGCTACAAGTTTGCTCGTCTTTACCCTTTGGACCAAAAGGATCTGGCCCCTGCCTTACGCCCGATCGGGTTTGGAGTACCCATTCCATCCAAGGTTGAGGTTGAAAAGTCTGCGAGGGATTATACTCCTCCACAATATCTAACTCTGCTTTTCACTGATTTGGGTGTTCTTACTCCATCCGTTGTTAGTGATGAGCTCATCCAGCTATACTTGTAG 1116 0.4812 MADTLQNPTSPNPKISAYYQTRAEHYGVVTSDWLAQAQAAVAQNPDDNGVSGTQVRVSDPDKPFSVIDEFNSWRKQPDLAEAVAAIRALAAVIRNSQATTMMELEIELKKASDSLKAPFRNCIDSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSGKSRLIERAEKFGEISYKARKVIAMLAQDFIFDGCTILVHGFSRVVFEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVRLLIDSAVAYSMDEVDMVLVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIGFGVPIPSKVEVEKSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0029 371 Gene3D - 63 172 IPR042528 -
Sto9g0029 371 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 14 371 - -
Sto9g0029 371 Gene3D - 174 371 IPR042529 -
Sto9g0029 371 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 14 371 - -
Sto9g0029 371 Pfam Initiation factor 2 subunit family 77 359 IPR000649 GO:0044237
Sto9g0029 371 SUPERFAMILY NagB/RpiA/CoA transferase-like 79 370 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0029 Sto-Chr9 278787 281934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0029 1 371 Eukaryotic Initiation Factors Gene Family AT1G53880 81.989 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0029 K03239 - vvi:100244672 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0029 9 278787 281934 Sto9g0029 9 278787 281934 ECH