Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0023 ATGGAATCTATCAACTCTTTCAAGGGGTACGGTAAGGTAGATGAGCTCGAGCAGGAAGCCTTTCGGAAGAAGACACGTAAGCGCCTGATCATCCTCATTATCTCCTCTGTAATATTAGTGGCGCTTATCATCGGCGCCGTTGCCGGAACCGTCATACACAACCGTAAcaactcctcctcctcctcttcttccggCGACTCGGCCCCTCACACTGAGTTAACTCCGGCCGCGTCACTCAAAGCAGTGTGCGACGCGACTCGTTACCCGGACTCGTGCCGCACCAGCATAGCCTCTCACCTGAGCTACTCCAACACCACCACCGACCCCGAATCTCTCTTCAAGCTTTCTCTTCTCGTCGCCATTGACGAAGTCTCGAAGCTCGCGACGACCTATCGTTCGGAGCTTAGAGCCAATGCGAAGGACCCTCGCGAACAGAGGGCCATCGATGTCTGCGGAATCGTTTTGGACGACGCCGTGGATAGCCTCAACGAGTCAATTTCGTCGCTGGAAGCCGCCGGCGGAGGCAAGAAGACGATTCTGTCGCCGGCGGAGATCAGCGACCTGAAGACGTGGCTCAGCGCGACGATTTCGAACCAAGAGACTTGTTTAGACGCTGTGGAGGAGTTGAATTCGACCAATTCGAAGGCGATTCTTAGGGATTTGAGAATCGCCATGAGGAATTCCACTGAGTTCACGAGCAATAGTTTGGCCATTGTCACGAAGATTATCGGTGTGCTCGCGAATTTCAACCTCCCGATCCATCGGAGGCTGCTCGGGTCGGGTTCGCACATACCGGATTGGGTTGGTCTGGCGGAGCGGAGGCTGTTGCAGCTGGAGACCAACAAAACGACGCCGGATGTGGTGGTGGCGAAGGACGGAACCGGTCAGTATAAGACTATCAGTGAGGCTGTGGCTGCggtgaagaagaagagtgaGAGTAGATTCGTGATTTATGTGAAGGAAGGTGTTTATGTAGAAAATGTTGAATTGGATAAGAATACATGGAATGTGATGATGATCGGCGATGGGAAAAGCAAAACCATAATCTCCGGCAGCCGGAATTACATCGACGGCACTCCCACTTTTGAGACTGCCACATTCGCTGTAAAGGGAAGGGGATTCATAGCCAAAGACATAGGGTTCAAGAACACTGCAGGTGCATCCAAGCACCAAGCTGTAGCCCTGAGATCTGCCTCAGATCGCTCTGTGTTCTACAAATGCTCCTTTGATGGCTACCAGGACACTCTCTATGCCCATTCCAACCGTCAATTCTACCGTGAATGTGACATTACAGGCACCATTGACTTCATCTTTGGCTATGCAGCTTCTATCTTCCAAAACTGCTATATCAAGCCCAGGCAGCCTCTTCCAAACCAGTTCAACACCATCACTGCTCAGGGCAAGAGTGAACCAAACTTGAACTCTGGCATTATAATCCAAAACTCTGTGATTTCTGCACTTGATGATCTTACTGCTCCCACATACCTTGGTAGGCCTTGGAAAAACTACTCCACCACTGTGTTTATGCACTCTGATATTGCAGGCTTCTTGAGCCCACTGGGCTGGACTGAATGGTACCCCAATGTGGAGCCTCCAAGtagtatattttatgcagaGTATCAGAATACTGGGGCAGGCTCAAGTGTGGCCCAGCGGGTTAAATGGGCCGGTTATAAGCCCAGCCTATCAGAAGATGAGGCAGGGAGGTTTACTGTTCAGTCTTTTATACAAGGCACTGAGTGGTTGCCTCAGACAGATGTGGAGTTTCAGTCCACATTATGA 1782 0.4938 MESINSFKGYGKVDELEQEAFRKKTRKRLIILIISSVILVALIIGAVAGTVIHNRNNSSSSSSSGDSAPHTELTPAASLKAVCDATRYPDSCRTSIASHLSYSNTTTDPESLFKLSLLVAIDEVSKLATTYRSELRANAKDPREQRAIDVCGIVLDDAVDSLNESISSLEAAGGGKKTILSPAEISDLKTWLSATISNQETCLDAVEELNSTNSKAILRDLRIAMRNSTEFTSNSLAIVTKIIGVLANFNLPIHRRLLGSGSHIPDWVGLAERRLLQLETNKTTPDVVVAKDGTGQYKTISEAVAAVKKKSESRFVIYVKEGVYVENVELDKNTWNVMMIGDGKSKTIISGSRNYIDGTPTFETATFAVKGRGFIAKDIGFKNTAGASKHQAVALRSASDRSVFYKCSFDGYQDTLYAHSNRQFYRECDITGTIDFIFGYAASIFQNCYIKPRQPLPNQFNTITAQGKSEPNLNSGIIIQNSVISALDDLTAPTYLGRPWKNYSTTVFMHSDIAGFLSPLGWTEWYPNVEPPSSIFYAEYQNTGAGSSVAQRVKWAGYKPSLSEDEAGRFTVQSFIQGTEWLPQTDVEFQSTL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0023 593 SMART PMEI_2 74 238 IPR006501 GO:0004857
Sto9g0023 593 CDD PMEI-like_3 81 242 - -
Sto9g0023 593 SUPERFAMILY Pectin lyase-like 284 591 IPR011050 -
Sto9g0023 593 TIGRFAM PME_inhib: pectinesterase inhibitor domain 64 241 IPR006501 GO:0004857
Sto9g0023 593 Pfam Plant invertase/pectin methylesterase inhibitor 79 238 IPR006501 GO:0004857
Sto9g0023 593 PANTHER PECTINESTERASE 1-RELATED 8 590 - -
Sto9g0023 593 PANTHER PECTINESTERASE 8 590 - -
Sto9g0023 593 Gene3D - 280 593 IPR012334 -
Sto9g0023 593 Pfam Pectinesterase 286 578 IPR000070 GO:0030599|GO:0042545
Sto9g0023 593 ProSitePatterns Pectinesterase signature 1. 311 330 IPR018040 -
Sto9g0023 593 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 79 243 IPR035513 -
Sto9g0023 593 ProSitePatterns Pectinesterase signature 2. 430 439 IPR033131 -
Sto9g0023 593 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 242 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0023 Sto-Chr9 229451 232370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0023 1 587 Carbohydrate Esterase AT1G53840 57.407 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0023 - - gmx:100784642 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0023 9 229451 232370 Sto9g0023 9 229451 232370 ECH