LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto9g0021	ATGAGCGAAGAAAGTTTCGCCGGAATGCGCAATTCCGGCGACCGCATTTCCACGTCGAAGAAAAACAGCAAACTCATCTTCTTCCCTCTCCTCACTACTCTGCTCCTCGTCTCCGCTACAATCGTCGTCGCCGGCGACTTCGACGTCGGCAATGTCCATTCCACTCCGTCACACGCCGTCGTCAAATCAACTTGTAGCACCACATTGTATCCGGAACTCTGCTTCTCCGCCGTCACCGCCGATCCTGACTTCGCCGAGAAAGTCTCGAACAACATAGACGTCATAAAACTCTCCCTCAACCAAACCATTAGATCCGTCCAGAACAACTACGTCGTGGTCAAGAAGTTTCAAACCAGAAAAGGCCTCACAAACAGAGAGCAAATTGCCCTCAACGATTGCCTCGTCACCATCGACGACACGCTCGACGAGCTCCGCCGGACCATCGCCGATCTCGACGATTCCGGCCGGCACGCCGACGATCTGTTGACTCTGATGAGTGCCGCCATGACCAACCAAGAGACCTGCCTGGACGGCTTCTCTCACGACCGCGCGGATAGGCGCGTGAGGGAAGGACTGATGGACGGTGAGAAAAATGATGGAGGTGAAGGAGGAGAGCGGGATTCGGTGGCCGAAGTGGATGTCGGCGGCGGACAGGAGGCTCCTTCAGGCGACGACGGTGTGTACAGAGAGAATGTGGAGGTGCCGAAGACGAAGACGTATCTTATGTTCGTGGGAGATGGAAGAACGAATACTATCATTACCGGAAGCAGGAATGTCGTTGATGGAAGCACAACCTTTAACTCTGCCACTGTGGCCATAGTGGGAGAACGATTCTTGGGTCGAGACATAACGTTCCAAAACACAGCAGGACCATCGAAGCACCAAGCTGTGGCTCTAAGAGTGGGAGCTGACCTCTCAGCATTCTATAGGTGCGACATGTTAGCCTACCAAGACACTCTTTACGTTCACAGCAACCGCCAATTCTTTGTCGGCTGCTTCATCGCCGGCACCGTCGACTTCATCTTCGGTAACTCCGCCGCCGTCTTCCAAGACTGCGACATCCATGCTCGCCGTCCCAACTCCGGCCAGAAAAATATGGTCACTGCACAGGGAAGAACTGACCCTAATCAGAACACCGGCATTGTCATCCAAAAATGCAGGATTGGAGCCACCCAGGATCTGGAGGCAGTGAAGTCAAGCTTTCCTACGTACCTTGGGAGGCCATGGAAGGAGTACTCTAGGACAGTGGTGATGCAGAGTAGCATAAGCGATGTGATAAACCCAGCAGGTTGGTTCCCTTGGGATGGCAATTTTGCTTTGGACACTTTGTACTATGGTGAGTATAAGAACACTGGAGCTGGTGCTGATACTTCTAAAAGAGTTAATTGGaaaggttttagggttattACTAGTGCTTCTGAGGCTCAGACTTTCACTCCTGGTTCCTTCATTGCTGGCTCTAGCTGGTTGTCTTCCACTGGCTTTCCATTTACTCTTGGCCTCTAA	1506	0.5199	MSEESFAGMRNSGDRISTSKKNSKLIFFPLLTTLLLVSATIVVAGDFDVGNVHSTPSHAVVKSTCSTTLYPELCFSAVTADPDFAEKVSNNIDVIKLSLNQTIRSVQNNYVVVKKFQTRKGLTNREQIALNDCLVTIDDTLDELRRTIADLDDSGRHADDLLTLMSAAMTNQETCLDGFSHDRADRRVREGLMDGEKNDGGEGGERDSVAEVDVGGGQEAPSGDDGVYRENVEVPKTKTYLMFVGDGRTNTIITGSRNVVDGSTTFNSATVAIVGERFLGRDITFQNTAGPSKHQAVALRVGADLSAFYRCDMLAYQDTLYVHSNRQFFVGCFIAGTVDFIFGNSAAVFQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATQDLEAVKSSFPTYLGRPWKEYSRTVVMQSSISDVINPAGWFPWDGNFALDTLYYGEYKNTGAGADTSKRVNWKGFRVITSASEAQTFTPGSFIAGSSWLSSTGFPFTLGL	501

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto9g0021	501	MobiDBLite	consensus disorder prediction	193	209	-	-
	Sto9g0021	501	Pfam	Plant invertase/pectin methylesterase inhibitor	60	187	IPR006501	GO:0004857
	Sto9g0021	501	SUPERFAMILY	Pectin lyase-like	220	500	IPR011050	-
	Sto9g0021	501	Gene3D	-	218	501	IPR012334	-
	Sto9g0021	501	TIGRFAM	PME_inhib: pectinesterase inhibitor domain	39	183	IPR006501	GO:0004857
	Sto9g0021	501	PANTHER	PECTINESTERASE	226	500	-	-
	Sto9g0021	501	PANTHER	PECTINESTERASE	33	197	-	-
	Sto9g0021	501	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	60	182	IPR035513	-
	Sto9g0021	501	Gene3D	Invertase/pectin methylesterase inhibitor family protein	57	198	IPR035513	-
	Sto9g0021	501	CDD	PMEI-like_3	63	197	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto9g0021	Sto-Chr9	210607	216263	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto9g0021	226	501	Carbohydrate Esterase	AT3G14310	81.522	5.04e-169	488

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto9g0021	K01051		-	vvi:100251413	608.601

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