Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0021 ATGAGCGAAGAAAGTTTCGCCGGAATGCGCAATTCCGGCGACCGCATTTCCACGTCGAAGAAAAACAGCAAACTCATCTTCTTCCCTCTCCTCACTACTCTGCTCCTCGTCTCCGCTACAATCGTCGTCGCCGGCGACTTCGACGTCGGCAATGTCCATTCCACTCCGTCACACGCCGTCGTCAAATCAACTTGTAGCACCACATTGTATCCGGAACTCTGCTTCTCCGCCGTCACCGCCGATCCTGACTTCGCCGAGAAAGTCTCGAACAACATAGACGTCATAAAACTCTCCCTCAACCAAACCATTAGATCCGTCCAGAACAACTACGTCGTGGTCAAGAAGTTTCAAACCAGAAAAGGCCTCACAAACAGAGAGCAAATTGCCCTCAACGATTGCCTCGTCACCATCGACGACACGCTCGACGAGCTCCGCCGGACCATCGCCGATCTCGACGATTCCGGCCGGCACGCCGACGATCTGTTGACTCTGATGAGTGCCGCCATGACCAACCAAGAGACCTGCCTGGACGGCTTCTCTCACGACCGCGCGGATAGGCGCGTGAGGGAAGGACTGATGGACGGTGAGAAAAATGATGGAGGTGAAGGAGGAGAGCGGGATTCGGTGGCCGAAGTGGATGTCGGCGGCGGACAGGAGGCTCCTTCAGGCGACGACGGTGTGTACAGAGAGAATGTGGAGGTGCCGAAGACGAAGACGTATCTTATGTTCGTGGGAGATGGAAGAACGAATACTATCATTACCGGAAGCAGGAATGTCGTTGATGGAAGCACAACCTTTAACTCTGCCACTGTGGCCATAGTGGGAGAACGATTCTTGGGTCGAGACATAACGTTCCAAAACACAGCAGGACCATCGAAGCACCAAGCTGTGGCTCTAAGAGTGGGAGCTGACCTCTCAGCATTCTATAGGTGCGACATGTTAGCCTACCAAGACACTCTTTACGTTCACAGCAACCGCCAATTCTTTGTCGGCTGCTTCATCGCCGGCACCGTCGACTTCATCTTCGGTAACTCCGCCGCCGTCTTCCAAGACTGCGACATCCATGCTCGCCGTCCCAACTCCGGCCAGAAAAATATGGTCACTGCACAGGGAAGAACTGACCCTAATCAGAACACCGGCATTGTCATCCAAAAATGCAGGATTGGAGCCACCCAGGATCTGGAGGCAGTGAAGTCAAGCTTTCCTACGTACCTTGGGAGGCCATGGAAGGAGTACTCTAGGACAGTGGTGATGCAGAGTAGCATAAGCGATGTGATAAACCCAGCAGGTTGGTTCCCTTGGGATGGCAATTTTGCTTTGGACACTTTGTACTATGGTGAGTATAAGAACACTGGAGCTGGTGCTGATACTTCTAAAAGAGTTAATTGGaaaggttttagggttattACTAGTGCTTCTGAGGCTCAGACTTTCACTCCTGGTTCCTTCATTGCTGGCTCTAGCTGGTTGTCTTCCACTGGCTTTCCATTTACTCTTGGCCTCTAA 1506 0.5199 MSEESFAGMRNSGDRISTSKKNSKLIFFPLLTTLLLVSATIVVAGDFDVGNVHSTPSHAVVKSTCSTTLYPELCFSAVTADPDFAEKVSNNIDVIKLSLNQTIRSVQNNYVVVKKFQTRKGLTNREQIALNDCLVTIDDTLDELRRTIADLDDSGRHADDLLTLMSAAMTNQETCLDGFSHDRADRRVREGLMDGEKNDGGEGGERDSVAEVDVGGGQEAPSGDDGVYRENVEVPKTKTYLMFVGDGRTNTIITGSRNVVDGSTTFNSATVAIVGERFLGRDITFQNTAGPSKHQAVALRVGADLSAFYRCDMLAYQDTLYVHSNRQFFVGCFIAGTVDFIFGNSAAVFQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATQDLEAVKSSFPTYLGRPWKEYSRTVVMQSSISDVINPAGWFPWDGNFALDTLYYGEYKNTGAGADTSKRVNWKGFRVITSASEAQTFTPGSFIAGSSWLSSTGFPFTLGL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0021 501 MobiDBLite consensus disorder prediction 193 209 - -
Sto9g0021 501 Pfam Plant invertase/pectin methylesterase inhibitor 60 187 IPR006501 GO:0004857
Sto9g0021 501 SUPERFAMILY Pectin lyase-like 220 500 IPR011050 -
Sto9g0021 501 Gene3D - 218 501 IPR012334 -
Sto9g0021 501 TIGRFAM PME_inhib: pectinesterase inhibitor domain 39 183 IPR006501 GO:0004857
Sto9g0021 501 PANTHER PECTINESTERASE 226 500 - -
Sto9g0021 501 PANTHER PECTINESTERASE 33 197 - -
Sto9g0021 501 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 182 IPR035513 -
Sto9g0021 501 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 198 IPR035513 -
Sto9g0021 501 CDD PMEI-like_3 63 197 - -
Sto9g0021 501 PANTHER PECTINESTERASE 33 197 - -
Sto9g0021 501 PANTHER PECTINESTERASE 226 500 - -
Sto9g0021 501 ProSitePatterns Pectinesterase signature 2. 334 343 IPR033131 -
Sto9g0021 501 Pfam Pectinesterase 225 486 IPR000070 GO:0030599|GO:0042545
Sto9g0021 501 SMART PMEI_2 56 193 IPR006501 GO:0004857
Sto9g0021 501 MobiDBLite consensus disorder prediction 193 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0021 Sto-Chr9 210607 216263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0021 226 501 Carbohydrate Esterase AT3G14310 81.522 5.04e-169 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0021 K01051 - vvi:100251413 608.601