Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0018 ATGGCTGACTCGTTTAACTCAACTGAGCCATTGAACGAGTCTCCGGCAGTTGAAGTGACGGGAAAGATCATGGTGATAGCTATAGTAATCCTCTTCATGGTCGTTGTGTTTGTGCTCGTCCTCCATCTCTACGCTAAATGGTTCTGGTGGCGCATAGAAGAACAGCCCACTCCTCCGCCGCCTCGCCGCCGCCGTCGCCGCCGATTTGTCTTCGCCCCCGGCCAAGATCCATCCATTAACATCCCTCATCAAAGCGGGCTTGACCCTTCATTGCTCAAATCCTTACCGGTACTGACATACCAACCACAGGATTTCAAAGAAGGTTTGGAATGTGCGGTTTGTCTCTCTGAGCTCGTTGAAGGGGAGAAAGCAAGACTTCTACCCAAATGCAATCATGGATTTCATGTGGATTGTATAGATATGTGGTTCCAATCCCATTCTACATGCCCAATTTGTAGAAACCCAGTGGCTCCTGAATCGTCTAAATGCAATTGCAGCTCAAGTGTTCGAGAAAATGCCTCTGAGAATAGTGGTCAATCAGAAGCAGCAGAGAACTTAGGTTCTGCTTCAGCTTCTGCTATGAATGTTTCAGAGTCTCCTAATTTCCCAACTAATGTATTGATTTGGGGGAATCAGACCCAAGTTAGTTCTAGTGGTACTtctttggaagaagaagaaggtccttcatcttcttctacGGCTAATACTAGTGGTAGTAGTAACAGTAGACACCATGAAATGCTGGTGATTGATATACCAAGTGAGGCCAATTCTTCATCATTATCCCCTTCTGGAAGTAGGTTTGGTGAAGATGAGCTGAAATCACCAGTGACAACGAGATTGAGATCATTGAAGAGGCTTTTAAGCAGAGATAAAAGGTTAGGTCCTTCTTCTAATCCTAGCTCTTTAGATGTGGAACAAGCAGGGAGAGGACAGAGCTAG 942 0.4406 MADSFNSTEPLNESPAVEVTGKIMVIAIVILFMVVVFVLVLHLYAKWFWWRIEEQPTPPPPRRRRRRRFVFAPGQDPSINIPHQSGLDPSLLKSLPVLTYQPQDFKEGLECAVCLSELVEGEKARLLPKCNHGFHVDCIDMWFQSHSTCPICRNPVAPESSKCNCSSSVRENASENSGQSEAAENLGSASASAMNVSESPNFPTNVLIWGNQTQVSSSGTSLEEEEGPSSSSTANTSGSSNSRHHEMLVIDIPSEANSSSLSPSGSRFGEDELKSPVTTRLRSLKRLLSRDKRLGPSSNPSSLDVEQAGRGQS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0018 313 MobiDBLite consensus disorder prediction 294 313 - -
Sto9g0018 313 MobiDBLite consensus disorder prediction 167 197 - -
Sto9g0018 313 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Sto9g0018 313 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 5 307 IPR044675 -
Sto9g0018 313 CDD RING-H2_EL5_like 110 153 - -
Sto9g0018 313 PANTHER RING-H2 FINGER PROTEIN ATL3 5 307 - -
Sto9g0018 313 MobiDBLite consensus disorder prediction 214 242 - -
Sto9g0018 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 159 IPR013083 -
Sto9g0018 313 SMART ring_2 111 152 IPR001841 -
Sto9g0018 313 MobiDBLite consensus disorder prediction 273 292 - -
Sto9g0018 313 SUPERFAMILY RING/U-box 91 159 - -
Sto9g0018 313 Pfam Ring finger domain 110 153 IPR001841 -
Sto9g0018 313 MobiDBLite consensus disorder prediction 254 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0018 Sto-Chr9 187380 188321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0018 18 292 C3H Transcription Factor Family AT1G53820 46.259 4.43e-73 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0018 - - zju:107434456 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0018 9 187380 188321 Sto9g0018 9 187380 188321 ECH