Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0012 ATGCTCATTGCCGTCAATGGAGAAGGCACAGATCCAACTGATGAGGTTGAAGACTATAGAGTGTATCTTTCTGGTTATGGAATACATGAAACGAAAGCCTTAATCCCTGAAATTTTGCTAGCTTCTGCTTTAAAGGCTATGTTCACTGGGATGAACTCACCATCCCAGTTAGGTTGGCCAGCAAACAGTGATGATCCCTGCGGACAGTCTTGGAAAGGCATTACTTGCTCAGGCAACCGAGTCACAGAGATtaaattaaataatcttgGACTATCTGGATCATTTGGCTTCCAATTACAAACCATGACATCTGTGACCAACCTAGATATGAGTTACAACAATTTTGGAAATAGCATACCATACCAGCTTCCTCCAAATTTGAAGACATTAAATCTTGCCAATAATCAGTTTAACGGGGGTTTACCGTATTCAATTTCTGAAATGACTTCTCTTACATACCTAAATCTTGCTCACAATCAGCTACAGAATGGACTGGGTGACATGTTTCAAAAGCTTTCTTCCCTATCCACACTGGACCTCTCTTTCAATTCTCTTTCAGGTGATCTCCCTCAGAGTTTCAGCTCACTTTCAAACATGAACACCATGTATCTGCAAAACAACCAGTTTACAGGCACCATTAATGTTCTTGCCAACCTGCCTCTTGATACTCTGAATGTGGAAAACAACCGTTTTACGGGCTGGATACCGGAACAGTTGAAAAGCATAGACCTAAAGCAATCAGGTAATGCATGGAGTTCAGGCCCTGCGCCCCCTCCACCTCCTGGCACACCTCCTGCTACTAGAAGCAACCGGAATCATAAATCTGGTGGAAATAACAGCCCTTCAGATGCTGACACCAATGGAGGGGGCAAAAAATCTGGTATAGGAGGTGGTGGTATTGCTGGAATAGTGATTTCCATCCTTGTTGTTGGGGCAATAGTAGCTTTCTTTTTGGTGAAAAGAAAATCAAGGAAGTCATCTTCAGATATAGAAAAGCTTGACAATCAGCCTTTGGCTCCTCTTAATTCAAGTGAAGTGCATGAAGTGAAGTCTGTGCAAACTCCTTCTGTAGTTGACATGAAGACATTTGATACTTCGGCCtcaataaatcttaaacccccaCCCATTGAACGTCACAAGTCATTTGATGAAGATGAATTTCCCAAACAGCCTGTTATTGTCAAGAAAACTGTAAAAGCTCCTGCAAATGTGAAAGCTTATTCTATAGCAGACCTACAGATTGCCACTGGAAGCTTTACTGTGGATCATCTCCTTGGAGAAGGATCTTTTGGACGTGTTTACCGAGCTCACTTTGACGATGGAAAGGTTTTTGCTGTGAAGAAGATAGATTCATCTGTTCTTCCCCATGATTTGTCTGACGAGTTTACAGAGATGGTCTCACACATCTCCCATTTGCATCATCCAAATGTTACAGAGCTTGTTGGTTATTGTTCAGAGCATGGACAACACCTCCTAGTCTATGAGTTTCATAAAAGTGGATCACTACATGACTTACTTCACTTACCAGATGAATATAGCAAACCACTAATATGGAATTCCCGTGTCAAGATTGCTTTAGGGACTGCACGCGCTTTAGAGTATCTACATGAAGTTTGTTCACCGTCGGTTGTTCATAAGAATATTAAGTCAGCCAACATATTGCTTGATTCGGAACTTAATCCTCACCTTTCGGACTCTGGATTGGCAAGCTATATTCCGAATGCGGACCagGTCTTGAACCGTAATGCTGGATCTGGATATGATGCACCTGAAGCAGCCTTGTCTGGTCAGTGTACTCTGAAGAGTGATGTCTACAGCTTTGGAGTTGTTATGTTGGAGCTTCTTAGTGGACGGAAACCATTTGATAGTTCAAGGCCAAGATCTGAGCAGTCTTTGGTTCGATGGGCAACGCCTCAACTTCATGATATTGATGCTCTGGCCAAAATGGTTGATCCTGCTCTGGAGGGACTATATCCTGTCAAGTCTCTTTCTAGGTTTGCTGATGTCATTGCTCTTTGCGTTCAGCCGGAGCCCGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCGTTGGTTCGGTTAGTGCAGCGAGCAAACATGAGTAAGAGGACATTTGGAACTGAGCAAGGAGGAACCCCACGAGGAGGTGATGATCAAGACACACAAGATATGTAA 2175 0.4253 MLIAVNGEGTDPTDEVEDYRVYLSGYGIHETKALIPEILLASALKAMFTGMNSPSQLGWPANSDDPCGQSWKGITCSGNRVTEIKLNNLGLSGSFGFQLQTMTSVTNLDMSYNNFGNSIPYQLPPNLKTLNLANNQFNGGLPYSISEMTSLTYLNLAHNQLQNGLGDMFQKLSSLSTLDLSFNSLSGDLPQSFSSLSNMNTMYLQNNQFTGTINVLANLPLDTLNVENNRFTGWIPEQLKSIDLKQSGNAWSSGPAPPPPPGTPPATRSNRNHKSGGNNSPSDADTNGGGKKSGIGGGGIAGIVISILVVGAIVAFFLVKRKSRKSSSDIEKLDNQPLAPLNSSEVHEVKSVQTPSVVDMKTFDTSASINLKPPPIERHKSFDEDEFPKQPVIVKKTVKAPANVKAYSIADLQIATGSFTVDHLLGEGSFGRVYRAHFDDGKVFAVKKIDSSVLPHDLSDEFTEMVSHISHLHHPNVTELVGYCSEHGQHLLVYEFHKSGSLHDLLHLPDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDSELNPHLSDSGLASYIPNADQVLNRNAGSGYDAPEAALSGQCTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGTEQGGTPRGGDDQDTQDM 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0012 724 MobiDBLite consensus disorder prediction 247 291 - -
Sto9g0012 724 ProSitePatterns Protein kinases ATP-binding region signature. 425 448 IPR017441 GO:0005524
Sto9g0012 724 ProSiteProfiles Protein kinase domain profile. 419 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0012 724 CDD STKc_IRAK 425 694 - -
Sto9g0012 724 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 38 721 - -
Sto9g0012 724 Gene3D Transferase(Phosphotransferase) domain 1 498 710 - -
Sto9g0012 724 SUPERFAMILY Protein kinase-like (PK-like) 403 691 IPR011009 -
Sto9g0012 724 Gene3D Ribonuclease Inhibitor 39 177 IPR032675 -
Sto9g0012 724 SUPERFAMILY L domain-like 44 239 - -
Sto9g0012 724 PANTHER OS01G0253100 PROTEIN 38 721 IPR045271 GO:0004714|GO:0006468
Sto9g0012 724 Pfam Leucine rich repeat N-terminal domain 43 77 IPR013210 -
Sto9g0012 724 Pfam Leucine Rich Repeat 126 146 IPR001611 GO:0005515
Sto9g0012 724 Pfam Leucine Rich Repeat 174 196 IPR001611 GO:0005515
Sto9g0012 724 Pfam Leucine Rich repeat 149 163 IPR001611 GO:0005515
Sto9g0012 724 Gene3D Ribonuclease Inhibitor 178 253 IPR032675 -
Sto9g0012 724 MobiDBLite consensus disorder prediction 702 724 - -
Sto9g0012 724 Gene3D Phosphorylase Kinase; domain 1 385 496 - -
Sto9g0012 724 MobiDBLite consensus disorder prediction 267 287 - -
Sto9g0012 724 Pfam Protein tyrosine and serine/threonine kinase 421 691 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0012 Sto-Chr9 150739 158372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0012 42 723 Strubbelig Receptor Gene Family AT1G53730 67.149 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Sto9g0012 PK_Tyr_Ser-Thr 4.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0012 - - gmx:100780323 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0012 9 150739 158372 Sto9g0012 9 150739 158372 ECH