Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0010 ATGGCTGAAGAACTGGATAGACCTTTGCTTGATCCAGAGAATTTCAACCGAGATGGTATTGATTTGGCACGTATCCCGTTGGAAGAAGTGTTTGAACAGTTAAGAACATCACCAAGAGGACTTTCATCTGAAGATGCCGAAGCCCGAATTCAAATATTTGGCGCCAACAAACTTGAAGAGAAGACAGAGaacaaaatattgaaatttttgGGTTTTATGTGGAATCCTCTGTCGTGGGTTATGGAAGCAGCAGCAATTATGGCAATTGTCCTTGCTAATGGCGGAGGGGAGGGTCCTGATTGGCAAGACTTTGTAGGGATTATATGCCTACTGCTAATAAACTCGACAATTAGTTTTATAGAAGAAAATAATGCTGGGAATGCTGCAGCAGCACTGATGGCTCGTTTAGCTCCTAAAACAAGGGTTCTCAGAGATGGTCTATGGCAAGAGCAAGATGCATCTATTTTAGTACCTGGAGATATAATCAGCATAAAGCTGGGAGATATCATTCCAGCTGATGCTCGCCTGCTTGAAGGAGACCCGCTAAAAATTGACCAATCAGCCCTAACTGGTGAGTCTCTGCCTGTCAGCAAGAAGCCAGGTGATGAAGTCTTTTCTGGTTCAACATGTAAGCATGGTGAGATAGAAGCCGTAGTGATCGCCACAGGAGTTCACTCCTTTTTTGGAAGGGCGGCGCACTTGGTTGATAGTACTATAGTTGTTGGTCATTTTCAGAAGGTCCTAACTGCAATTGGGAACTTCTGCATTTGCTCTATAGCTGTAGGAATGGTTCTTGAAATCATTGTAATGTTCCCTATACAGCACCGTTCATATAGGGATGGAATCAATAACCTACTTGTTCTCTTAATAGGAGGAATACCCATTGCCATGCCAACAGTGTTATCTGTGACACTTGCAATTGGTTCTCATCGACTCTCACAGCAGGGAGCCATAACAAAAAGAATGACAGCAATCGAAGAAATGGCAGGAATGGATGTCCTATGCAGTGACAAAACTGGAACTCTTACCCTGAATCGCCTCACTGTTGATCGAAGCCTTATCGAGGTCTTTGACAGAAATGTGGACAAAGAAAAGGTTGTCCTACTAGCAGCCAGAGCAGCTAGACTGGAGAACCAAGATGCCATTGATGCTGCCATTGTTAATATGCTAGCTGATCCTAAGGAGGCACGTGCAAACATAACTGAAGTTCATTTCCTACCTTTCAATCCAGTAGATAAACGCACAGCCATTACTTATATTGATTCTGATGGCAACTGGTATAGGGCCAGCAAAGGAGCTCCTGAACAGATTCTAAATATGTGCCAAGAGAAAGACGAAATTGCCGGAAAAGTGCATGCAATCATTGACAAGTTTGCTGAAAGGGGCTTGCGATCTCTTGCTGTTGCTTATCAGGAAATTCCTGAAAAAACTAAGGATAGTCCCGGAGGTCCTTGGACTTTTTGCGGGTTGTTGCCATTGTTTGATCCTCCACGACATGATAGTGCTGAGACTATACGCAGAGCGCTTAATCTTGGAGTCTGTGTCAAGATGATTACAGGGGACCAGTTGGCAATTGCAAAAGAGACAGGCCGAAGACTTGGTATGGGAACAAACATGTACCCTTCTTCATCATTGTTGGGTCGAGACAAAGACGAAAATGAAGCTCTCCCAGTAGACGAGCTGATTGAAAAGGCAGATGGTTTTGCTGGTGTATTTCCAGAACATAAGTATGAAATTGTGAAAATCTTACAAGAAAAGAAGCATATAGTTGGAATGACTGGAGATGGTGTAAATGATGCGCCTGCTTTAAAGAAAGCAGATATTGGAATTGCTGTATCAGATTCTACAGATGCTGCAAGAAGTGCTGCTGATATAGTCTTAACTGAGCCTGGCTTAAGCGTGATCATTAGTGCTGTGTTAACTAGCCGAGCTATATTTcaaagaatgaaaaattacaCAATATATGCAGTCTCCATAACCATAAGGATAGTGCTTGGTTTTGTGCTCCTAGCATTGATTTGGGAGTATGATTTTCCACCTTTCATGGTCCTGATCATAGCAATACTGAATGATGgAACTATCATGACCATATCTAAAGATCGAGTAAGGCCATCCCCAACGCCAGACAGTTGGAAGCTGCCGGAGATATTTGCAACCGGAATAGTTATTGGCGCTTACCTTGCTTTGGTCACTGTCCTATTCTACTGGGTAATAGTGAAGACCACTTTTTTTGAGACCCACTTCCATGTGACCTCCTTATCCAGCGACAGTGAGAAAGTTTCATCTGCTATATACCTTCAAGTTAGCATCATTAGCCAGGCTTTAATTTTTGTCACTCGTAGTCAAGGGTGGTCTTTTCTGGAGAGACCTGGAGTTCTATTGATGTGTGCCTTTGTAATTGCCCAACTGGTGGCAACCGTACTAGCTGTTTATGCACATATCAGCTTTGCTTATATCAGAGGGATTGGATGGGGTTGGGCTGGTGTGATATGGCTTTACAGTTTAGTCTTCTATATACCCTTGGACATCATCAAGTTCATAGTGCGCTATGCCTTAAGTGGAGAAGCTTGGAATCTCTTATTTGAAAGAAAGGTCAGTGCAGAGTTCTTCTTTACTGCTTTTACTTCTAAGAAAGACTATGGGAAGGAAGATAGGGCAGCAAAGGAGGTCAATCCAAGGCGATCTTCTTTGATTGCGGAACAGGCCAAGCGACGTGCTGAAATAGCCAGGCTGGAAGAGTTGCACATTCTGAGGGGACATGTAGAGTCTGTTATGAGACTTAAAAATTTAGACCAGACTGCGATCCGATCAGCATACACAGTCTAA 2826 0.4275 MAEELDRPLLDPENFNRDGIDLARIPLEEVFEQLRTSPRGLSSEDAEARIQIFGANKLEEKTENKILKFLGFMWNPLSWVMEAAAIMAIVLANGGGEGPDWQDFVGIICLLLINSTISFIEENNAGNAAAALMARLAPKTRVLRDGLWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVSKKPGDEVFSGSTCKHGEIEAVVIATGVHSFFGRAAHLVDSTIVVGHFQKVLTAIGNFCICSIAVGMVLEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRSLIEVFDRNVDKEKVVLLAARAARLENQDAIDAAIVNMLADPKEARANITEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNMCQEKDEIAGKVHAIIDKFAERGLRSLAVAYQEIPEKTKDSPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGRDKDENEALPVDELIEKADGFAGVFPEHKYEIVKILQEKKHIVGMTGDGVNDAPALKKADIGIAVSDSTDAARSAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPDSWKLPEIFATGIVIGAYLALVTVLFYWVIVKTTFFETHFHVTSLSSDSEKVSSAIYLQVSIISQALIFVTRSQGWSFLERPGVLLMCAFVIAQLVATVLAVYAHISFAYIRGIGWGWAGVIWLYSLVFYIPLDIIKFIVRYALSGEAWNLLFERKVSAEFFFTAFTSKKDYGKEDRAAKEVNPRRSSLIAEQAKRRAEIARLEELHILRGHVESVMRLKNLDQTAIRSAYTV 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0010 941 SUPERFAMILY Calcium ATPase, transduction domain A 138 235 IPR008250 -
Sto9g0010 941 CDD P-type_ATPase_H 40 846 IPR006534 GO:0008553|GO:0016021|GO:0120029
Sto9g0010 941 PANTHER CALCIUM-TRANSPORTING ATPASE 1 921 - -
Sto9g0010 941 Pfam haloacid dehalogenase-like hydrolase 331 607 - -
Sto9g0010 941 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 1 921 - -
Sto9g0010 941 SFLD p-type atpase 317 644 IPR044492 -
Sto9g0010 941 SMART Cation_ATPase_N_a_2 21 93 IPR004014 -
Sto9g0010 941 Gene3D - 347 494 IPR023299 GO:0000166
Sto9g0010 941 PRINTS H+-transporting ATPase (proton pump) signature 451 469 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto9g0010 941 PRINTS H+-transporting ATPase (proton pump) signature 565 581 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto9g0010 941 PRINTS H+-transporting ATPase (proton pump) signature 593 609 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto9g0010 941 PRINTS H+-transporting ATPase (proton pump) signature 624 649 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto9g0010 941 PRINTS H+-transporting ATPase (proton pump) signature 765 786 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto9g0010 941 Pfam Cation transporter/ATPase, N-terminus 25 87 IPR004014 -
Sto9g0010 941 Gene3D - 332 630 IPR023214 -
Sto9g0010 941 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 40 811 IPR006534 GO:0008553|GO:0016021|GO:0120029
Sto9g0010 941 SUPERFAMILY HAD-like 331 640 IPR036412 -
Sto9g0010 941 ProSitePatterns E1-E2 ATPases phosphorylation site. 337 343 IPR018303 -
Sto9g0010 941 Gene3D - 893 941 - -
Sto9g0010 941 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 568 678 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto9g0010 941 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 355 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto9g0010 941 SFLD C1.7: P-type atpase like 317 644 - -
Sto9g0010 941 Gene3D - 100 820 - -
Sto9g0010 941 Pfam E1-E2 ATPase 136 314 - -
Sto9g0010 941 SUPERFAMILY Calcium ATPase, transmembrane domain M 21 852 IPR023298 -
Sto9g0010 941 PRINTS P-type cation-transporting ATPase superfamily signature 185 199 - -
Sto9g0010 941 PRINTS P-type cation-transporting ATPase superfamily signature 335 349 - -
Sto9g0010 941 PRINTS P-type cation-transporting ATPase superfamily signature 489 500 - -
Sto9g0010 941 PRINTS P-type cation-transporting ATPase superfamily signature 511 521 - -
Sto9g0010 941 PRINTS P-type cation-transporting ATPase superfamily signature 593 612 - -
Sto9g0010 941 PRINTS P-type cation-transporting ATPase superfamily signature 616 628 - -
Sto9g0010 941 Gene3D - 138 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0010 Sto-Chr9 126493 137002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0010 1 941 Primary Pumps ATPases AT1G17260 80.503 0.0 1535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0010 K01535 - gmx:100795836 1636.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0010 9 126493 137002 Sto9g0010 9 126493 137002 ECH