Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0007 ATGAACAAAGATCCCCAAGACGCCGCCTTTTCTTTCTGGGTTTCTGTTCTGATGACACAGGAGGCTTCCAGACAGAGACAAAGACCAACCCCATcaacatcttcttcttcttcttcctcctctgttATGACATTAATGGTCTTTTTCCTTCTACCGTTGGTCCTGTCTTGCTTCGTTGTGACTGTCTCCTCCTCTTGTTCCCAATCGGATAGAGACTCTCTCTTGGCCTTTTCTAGCAATATATCCATACCTTCCTCTTACCCTCCTCTCAATTGGTCAACTTCTGCTGATTGCTGCTCTTGGGAAGGCATTCTTTGTGATAATAACGAGAATAGGGATCAGCGAGTAATTCATCTATTGCTTCCTTCCAGAGGTCTCATTGGCTCCATATCCCCATCTCTCATAAACCTCTCTGCTTTGTCTCACCTCAATCTTTCCCATAATCGATTATCTGGTAATCTCCCAACCCAATTCCTCTCACTCCTTAATCATTTGCAGATTCTCGATTTAAGCTACAATCGTCTTTCCGGGGAATTGCCAATAAACTCTGGTGGTAATAATAGCAGCAGTAGTATTATCCAGGAGCTTAATTTGTCTAGCAATTTGTTTCATGGAATACTTCCATCTTCTTTCCTTGAGTACCTAACTGCTGCAGCATCAGGAGGGACTTTGACTTCTTTTAATGTTAGTAACAACAGCTTCACGGGTCAAATTCCCACTTCTCAACTTTGCATTAATGGAAGTGATGCCTCTTCTTCTCTTAGATTCTTGGATGTTTCCTCCAATGATTTCAATGGTTCAATTCAATCTGGATTGGGAGCATGTTCCAAGCTTGAGGTTTTCCGGGCAGGTTTCAATTTTCTATCTGGGCCTCTTCCTGGTGATATTTTTGATGTTGTTTCCCTCAGAGAAATCTCCTTGCCCCTCAATAAACTCTCTGGAAATATTGATGATGGCATTGTTAGCCTTACTAATCTCACAGTTCTGGAGCTCTATTCCAATGATTTCAGAGGTCCCATCCCAGGGGATATTGGTAAGCTTTCCAAGCTTGAAAAGCTAGAACTTCATATCAACAATCTGACTGGTACTTTGCCTCCTTCTCTGACCAACTGTGTCAATTTAGTCAAGTTAAATTTAAGGGTCAACCAGTTGGAAGGAGTTCTCTCAGAATTCAATTTCTCCACTTTCCTCCAGCTTACTACGCTTGATCTTGGCAACAATAATTTTACTGGTAATTTACCAACAACCCTTTATGCATGCAAGTCACTAGCTGCAGTAAGGCTAGCATTTAATAATCTTGAGGGGCAGATCACCCCAGACATACTTGGACTTGAGTCTCTGTCTTTCCTCTCAATATCTACCAACTACTTGAGAAATTTCACAGGAGCTATGAAGATACTCACAGGTCTCAAGAACCTTAGTACCCTTGCCCTCTCCAAGAATTTTTATAATGAAATCATGCCAAATGATGAGAACTTAATAGTCCCAGATGGATTTCAGAAACTCCAGGTTCTAGGCTTGGGTGGCTGTAACTTCACAGGTCAAGTACCACGCTGGATTGCAGAGCTTAAGAAGCTGGAAGTCATTGACCTGTCCTATAATCTAATCAGTGGTTCAATTCCTCCTTGGTTGGGCACACTTCCTCAGCTTTTCTACTTAGACTTGTCTTATAACCAGCTTACAGGAACATTTCCCACGGAGCTCGCAGGAATTTCAGCATTAACTTCACAGGAGGCAAATGATAAAATCGAAAGGTCTTACCTGGAGTTACCTGTTTTCATTGTGCCAAACAATGCGTCTGAGCAGCAATATAATCAACTTTCCAACCTACCACCAGCAATATATCTGAGAAACAACAGCATCAGTGGCAGTATCCCCACGGAGATTGGCCTAATGAAAGTCCTTCATCAGCTGGATCTGAGTAATAACAAGTTCTCTGGCAGTATTCCAGTTCAAATTTCTAACTTGACTAACTTAGAAAGATTGGACCTCTCAGGAAACCAACTATCTGGTGAAATTCCTGCTTCACTCAAAAACCTGCATTTCTTGTCTTTTTTCAGTGTGGCCAACAATAATCTTCAAGGACAGGTACCTACTGGTGGTCAATTTGATACATTCTCCCCTTCCAGCTTTGAAGGAAATCCTCAATTGTGTGGTTTAGTTGTTAACCGCCCTTGTAGTGTACAAAGTGGTAGTGCAACTCGTTTCAGCTCAAGCAAAAAGATAATGATCGGACTTGTCATTGCGGTCTGTTTTGGCACTGTTTCTATCATGATTGTGTTGACAATCTGGATACTTTCCAAGAGGAGGATCAATCCAGGAGGAGACACTGACAAGTATGAACTGGAATCAATTTCTGCCAACTCCACAAGCGGGGTTCATCCTGAGGCTAATCAGGAGGCTAGCCTAGTGGTAATGTTCCCcaataaaacaaatgaaatcaaAGATCTTACTATATCTGAGATCTTAAAAGCTACTGAAAATTTCAGTCAAGCAAACATCATAGGATGTGGGGGTTTTGGTTTGGTTTATAAAGCAACATTACCTGATGGAACTAAGCTAGCCATCAAGAAACTTTCCGGAGATATGGGGCTTATGGAAAGGGAATTCAAAGCAGAGGTAGAGGTTTTATCAACAGCCCGACACGAGAATCTGGTTGCATTGCAAGGTTACTGTGTGCATGATGGCTTTAGGCTTCTCATCTATACTTACATGGAAAATGGAAGTCTGGATTATTGGTTGCATGAGAAGGCTGATGGTGCATCCAGACTTGATTGGCCGACTCGACTAAAGATAGCACAAGGTGCGAGTTGTGGGTTGGCTTACATGCACCAGATATGTGAACCTCACATTGTGCATCGCGATATAAAGTCGAGCAATATCCTCCTAAATGAAAAGTTTGAGGCACATGTGGCTGATTTTGGGTTATCCAGATTGATTCTTCCTTATCACACTCATGTTACAACTGAACTTGTAGGTACATTAGGTTACATTCCTCCTGAGTATGGGCAAGCATGGGTGGCCACTCTGAGGGGAGATGTGTACAGCTTTGGGGTTGTCATGCTTGAGTTGCTCACTGGGAGGAGGCCTGTCGACATATGCAAACCGAAAATGTCAAGGGAATTGGTAGCCTGGGTGCAACAAATGAGGAGTGAAGGAAAACAGGACCAAGTCTTTGACCCCCTTCTGAGAGGGAAGGGCTTTGAAGAGCAGATGCTGCAAGTACTTGATGTGGCTTGCTTGTGTGTCAACCAGAATCCTTTCAAGAGACCAAGCATCAAAGAAGTTGTTGATTGGCTGAAGAATATGGTTAATGTTGCTactaaaagaaattttaacaaaaatatttgcTATCAAAAGAATCATGGAAAAGGCTTAGACATTTTTATTTCTCAGCCTGCCATCTAA 3408 0.4152 MNKDPQDAAFSFWVSVLMTQEASRQRQRPTPSTSSSSSSSSVMTLMVFFLLPLVLSCFVVTVSSSCSQSDRDSLLAFSSNISIPSSYPPLNWSTSADCCSWEGILCDNNENRDQRVIHLLLPSRGLIGSISPSLINLSALSHLNLSHNRLSGNLPTQFLSLLNHLQILDLSYNRLSGELPINSGGNNSSSSIIQELNLSSNLFHGILPSSFLEYLTAAASGGTLTSFNVSNNSFTGQIPTSQLCINGSDASSSLRFLDVSSNDFNGSIQSGLGACSKLEVFRAGFNFLSGPLPGDIFDVVSLREISLPLNKLSGNIDDGIVSLTNLTVLELYSNDFRGPIPGDIGKLSKLEKLELHINNLTGTLPPSLTNCVNLVKLNLRVNQLEGVLSEFNFSTFLQLTTLDLGNNNFTGNLPTTLYACKSLAAVRLAFNNLEGQITPDILGLESLSFLSISTNYLRNFTGAMKILTGLKNLSTLALSKNFYNEIMPNDENLIVPDGFQKLQVLGLGGCNFTGQVPRWIAELKKLEVIDLSYNLISGSIPPWLGTLPQLFYLDLSYNQLTGTFPTELAGISALTSQEANDKIERSYLELPVFIVPNNASEQQYNQLSNLPPAIYLRNNSISGSIPTEIGLMKVLHQLDLSNNKFSGSIPVQISNLTNLERLDLSGNQLSGEIPASLKNLHFLSFFSVANNNLQGQVPTGGQFDTFSPSSFEGNPQLCGLVVNRPCSVQSGSATRFSSSKKIMIGLVIAVCFGTVSIMIVLTIWILSKRRINPGGDTDKYELESISANSTSGVHPEANQEASLVVMFPNKTNEIKDLTISEILKATENFSQANIIGCGGFGLVYKATLPDGTKLAIKKLSGDMGLMEREFKAEVEVLSTARHENLVALQGYCVHDGFRLLIYTYMENGSLDYWLHEKADGASRLDWPTRLKIAQGASCGLAYMHQICEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDICKPKMSRELVAWVQQMRSEGKQDQVFDPLLRGKGFEEQMLQVLDVACLCVNQNPFKRPSIKEVVDWLKNMVNVATKRNFNKNICYQKNHGKGLDIFISQPAI 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0007 1135 PANTHER OS06G0692500 PROTEIN 45 1107 - -
Sto9g0007 1135 SUPERFAMILY Protein kinase-like (PK-like) 813 1100 IPR011009 -
Sto9g0007 1135 Pfam Leucine Rich repeat 163 178 IPR001611 GO:0005515
Sto9g0007 1135 SMART serkin_6 829 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0007 1135 ProSiteProfiles Leucine-rich repeat profile. 658 681 IPR001611 GO:0005515
Sto9g0007 1135 PANTHER LEUCINE RICH REPEAT KINASE 2 45 1107 - -
Sto9g0007 1135 ProSiteProfiles Protein kinase domain profile. 829 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g0007 1135 Gene3D Phosphorylase Kinase; domain 1 789 904 - -
Sto9g0007 1135 Pfam Leucine rich repeat 501 560 IPR001611 GO:0005515
Sto9g0007 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 951 963 IPR008271 GO:0004672|GO:0006468
Sto9g0007 1135 ProSitePatterns Protein kinases ATP-binding region signature. 835 858 IPR017441 GO:0005524
Sto9g0007 1135 Gene3D Transferase(Phosphotransferase) domain 1 905 1124 - -
Sto9g0007 1135 SUPERFAMILY L domain-like 249 576 - -
Sto9g0007 1135 PRINTS Leucine-rich repeat signature 550 563 - -
Sto9g0007 1135 PRINTS Leucine-rich repeat signature 656 669 - -
Sto9g0007 1135 SUPERFAMILY L domain-like 92 315 - -
Sto9g0007 1135 SMART LRR_sd22_2 323 355 - -
Sto9g0007 1135 SMART LRR_sd22_2 523 538 - -
Sto9g0007 1135 SMART LRR_sd22_2 656 682 - -
Sto9g0007 1135 SMART LRR_sd22_2 547 573 - -
Sto9g0007 1135 SMART LRR_sd22_2 162 198 - -
Sto9g0007 1135 Pfam Leucine rich repeat N-terminal domain 68 107 IPR013210 -
Sto9g0007 1135 Gene3D Ribonuclease Inhibitor 69 190 IPR032675 -
Sto9g0007 1135 SUPERFAMILY L domain-like 603 718 - -
Sto9g0007 1135 SMART LRR_typ_2 523 547 IPR003591 -
Sto9g0007 1135 SMART LRR_typ_2 656 679 IPR003591 -
Sto9g0007 1135 SMART LRR_typ_2 162 186 IPR003591 -
Sto9g0007 1135 SMART LRR_typ_2 137 161 IPR003591 -
Sto9g0007 1135 SMART LRR_typ_2 632 655 IPR003591 -
Sto9g0007 1135 SMART LRR_typ_2 396 420 IPR003591 -
Sto9g0007 1135 SMART LRR_typ_2 347 371 IPR003591 -
Sto9g0007 1135 Gene3D Ribonuclease Inhibitor 191 292 IPR032675 -
Sto9g0007 1135 Gene3D Ribonuclease Inhibitor 293 392 IPR032675 -
Sto9g0007 1135 Gene3D Ribonuclease Inhibitor 393 733 IPR032675 -
Sto9g0007 1135 Pfam Leucine Rich Repeat 658 680 IPR001611 GO:0005515
Sto9g0007 1135 Pfam Protein kinase domain 830 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0007 Sto-Chr9 103162 107221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0007 18 730 Miscellaneous Gene Families AT1G17250 52.500 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Sto9g0007 Pkinase 2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0007 - - gmx:100782574 1586.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0007 9 103162 107221 Sto9g0007 9 103162 107221 ECH