Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4721 ATGGAAGAGACAAGTACGAATCGGTCAGAGCAAGGTAGGAAGGGGTCAGAGCAAGGTCATACGTTATCGCCCCTTATGTTCATAGGCATATTCAGTGGGCTTCTGCTCATAGCTTTTATAATCATTTGCGTCTATTGCATCTATGTCAGATGCACACAACTTCAGCTCGATGTTGTCATAACCACGGTCATATATCAACCGCCGTCCCATGCGTCCGATACGACTACAGATGAACAAACAGAATGCATAATATGTTTAGCAACATATGAAAGCGGGGACAGATTAAAAGTTCTTCCCTGCAATCACCGTTTTCACGGTGATTGTTTGGAGAAGTGGTTGACAGACCATGCCACTTGTCCGTTGTGCAGGTATAATCTGCCCAACCAGCACAACCATCCTTGA 402 0.4502 MEETSTNRSEQGRKGSEQGHTLSPLMFIGIFSGLLLIAFIIICVYCIYVRCTQLQLDVVITTVIYQPPSHASDTTTDEQTECIICLATYESGDRLKVLPCNHRFHGDCLEKWLTDHATCPLCRYNLPNQHNHP 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4721 133 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 129 IPR013083 -
Sto8g4721 133 PANTHER TARGET OF ERK KINASE MPK-1 67 129 - -
Sto8g4721 133 Pfam Ring finger domain 81 123 IPR001841 -
Sto8g4721 133 ProSiteProfiles Zinc finger RING-type profile. 82 123 IPR001841 -
Sto8g4721 133 SUPERFAMILY RING/U-box 81 129 - -
Sto8g4721 133 CDD RING-H2_PA-TM-RING 81 123 - -
Sto8g4721 133 PANTHER TARGET OF ERK KINASE MPK-1 67 129 - -
Sto8g4721 133 SMART ring_2 82 122 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4721 Sto-Chr8 49540047 49540448 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4721 79 127 C3H Transcription Factor Family AT1G26800 53.061 1.79e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4721 - K11982 cmos:111449680 82.8037