Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4720 atgcTCAGGACGAGGCCTCTTTTCCCTGTCACCACCTCATCCAGTACTAGTAGTATTAGTCATCAATGGCTGAAGCTCTCGTTCGCACAAGTAggtaataataatgatgaagaTGATCACTTCAACTTGAAAATGGTGGAGCAGAAGCCACACATGAGGAAAAGCAGACGAGGCCCAAGGTCTCGAAGCTCCCAGTATCGAGGAGTCACTTTCTACCGTGGATTTGACACTGCCCATGCTGCAGCAAGAGCGTACGATCGGGCGGCAATTAAATTCCGCGGAGTTGAAGCTGATATAAACTTTAGTTTGAGTGATTACGAGGAAGACATGAAGCAGATGAGAAATCTGAGTAAAGAAGAGTTTGTGCAAGTACTTCGTCGACAAAACTCGGGTGGGCCAAGAGGGAGCTCAAGATATAAAGGTCTGTCCCTCCCCAAATGGGGTCAATGGGAAGCAAGAATGACCTCATTCTTTGCCAAAAAAGAATTGGTACCCAGCTTTGAGGCTAGTAGCTTTAAGGGAGAAAGAGGTGTTGAGTCCAGCAGATCAATAGGTGGGAGTTTTCATAATCTTGATTTGAGCCTTGGGATTTCTCCACCTTCTAATAATGAATCCAACAAGTATGACTGTGGGGCAGATTTTCCTTTACCTTCTCACATACCCTACAGGAGACCAGTGATTGATACTGGCCCTGCATTAATAAGGGGACAAGCTATTTATGGTGTGGCAGTGGCATCTAAATTTGATCAAATTCGCTCACATACATATCCTGCCTATCTGCACAATTATGAGAAGATAACACAATACCAAACACCTTCTTGGCAACTTCAGAGTAACGACAATATTGCTCTTGTGCCGGCGCTTTCTAATGCAGCATCATCAAAATTCAATTCTTCTACCAACATTGATTCATCAGCCTACTTGTAA 927 0.4315 MLRTRPLFPVTTSSSTSSISHQWLKLSFAQVGNNNDEDDHFNLKMVEQKPHMRKSRRGPRSRSSQYRGVTFYRGFDTAHAAARAYDRAAIKFRGVEADINFSLSDYEEDMKQMRNLSKEEFVQVLRRQNSGGPRGSSRYKGLSLPKWGQWEARMTSFFAKKELVPSFEASSFKGERGVESSRSIGGSFHNLDLSLGISPPSNNESNKYDCGADFPLPSHIPYRRPVIDTGPALIRGQAIYGVAVASKFDQIRSHTYPAYLHNYEKITQYQTPSWQLQSNDNIALVPALSNAASSKFNSSTNIDSSAYL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4720 308 Gene3D AP2/ERF domain 57 104 IPR036955 GO:0003700|GO:0006355
Sto8g4720 308 SMART rav1_2 65 108 IPR001471 GO:0003700|GO:0006355
Sto8g4720 308 ProSiteProfiles AP2/ERF domain profile. 42 102 IPR001471 GO:0003700|GO:0006355
Sto8g4720 308 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 161 - -
Sto8g4720 308 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 3 161 - -
Sto8g4720 308 SUPERFAMILY DNA-binding domain 73 103 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4720 Sto-Chr8 49533639 49537453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4720 4 161 AP2-EREBP Transcription Factor Family AT2G28550 53.552 5.31e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4720 K09284 - tcc:18586321 233.032