Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g4706 TTGGCAGTGAGGAAGACGAGCGTAGACAAAGAAGTCTTGGGTGCAGAAGAAGGGCCTCCGAAGATAGTGAGGGTGTCCCAAAATGGGAATGGGCAGTTCAAGAGCATCACGGAGGCCATTAATAGCATCCCACATGGGAACACAAAGCGTATAATTGTGTACATTGCGGGTGGAACTTACAATGAGAAAGTGATGATAAATAGGACAAAGCCGTTCGTGACATTGTTTGGTGAACCTGGGAATAAGCCTAACTTGACCTACAATGGCAACGCCAAGAGATTTGGAACCGTCGATAGCACTGCGTTACAATACGGCACCGTTGATAGTGCTTCCTTGATTGTGGAATCCGATTACTTTGTGGCGGCTAATCTCATTATTTCGaattcgGCGCCGATGCCGGACGGGAAGAGGAAGGGGGCTCAGGCGGTGGCAATGAGGATCTCCGGCGACAAGGCTGCATTCTATGGGTGCACATTTCTAGGATTCCAAGACACCATTTGTGATGACAGAGGGTACCATTTCTTCAAAGATTGCACCATTCAAGGCACTGTGGATTTCATTTTCGGAAGTGGGAAATCTCTCTATTTGATGCAGAACACAAGATTGAATGTAGTTGAAAGCATTATCGGAGGAGGGATGATAGCTGCACACGCGGGAAAAAGCGTTACGGAAGATACAGGTTACTCGTTCGTGCAGTGCGAGGTAATCGGGAATGCGAAAGGCGCGTTCTTAGGGAGAGCGTGGATGACAAGCCCGAAAGTAGTGTACGCATACACCACAATGGGCACAGTAGTGGACCCACTGGGTTGGAGCCATAACAATCATCCAGAACGTGCCAACACTGTGTATTTTGGAGAATACAAGAACAAAGGAGTGGGTAGTGATGCCAAAGGACGTGCCCATTTCACAAAGCAGCTCTCCGATTCAGAGGCTCGTCCTTTCATCTCACTTGCTTACATTCAGGCTTCTAAGTGGCTTCTTCCTCCTCCCAAAGTTTAA 999 0.4785 LAVRKTSVDKEVLGAEEGPPKIVRVSQNGNGQFKSITEAINSIPHGNTKRIIVYIAGGTYNEKVMINRTKPFVTLFGEPGNKPNLTYNGNAKRFGTVDSTALQYGTVDSASLIVESDYFVAANLIISNSAPMPDGKRKGAQAVAMRISGDKAAFYGCTFLGFQDTICDDRGYHFFKDCTIQGTVDFIFGSGKSLYLMQNTRLNVVESIIGGGMIAAHAGKSVTEDTGYSFVQCEVIGNAKGAFLGRAWMTSPKVVYAYTTMGTVVDPLGWSHNNHPERANTVYFGEYKNKGVGSDAKGRAHFTKQLSDSEARPFISLAYIQASKWLLPPPKV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g4706 332 Pfam Pectinesterase 23 322 IPR000070 GO:0030599|GO:0042545
Sto8g4706 332 SUPERFAMILY Pectin lyase-like 19 326 IPR011050 -
Sto8g4706 332 Gene3D - 20 328 IPR012334 -
Sto8g4706 332 ProSitePatterns Pectinesterase signature 2. 180 189 IPR033131 -
Sto8g4706 332 PANTHER PECTINESTERASE 63-RELATED 16 327 - -
Sto8g4706 332 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 16 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g4706 Sto-Chr8 49438020 49444107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g4706 1 332 Carbohydrate Esterase AT1G69940 56.325 1.35e-128 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g4706 K01051 - egr:104426935 417.157